Array 1 57673-56982 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUM010000017.1 Blautia massiliensis strain MSK.18.38 NODE_17_length_90707_cov_56.2234, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 57672 30 100.0 35 .............................. AAGCTTACAGTAATCTCAAGATGTTCACCAAACAC 57607 30 100.0 37 .............................. TGTTGTAGTTTACGCCCTGGATAGCTTCCCTGGTTTC 57540 30 100.0 36 .............................. GTCCGTTTTTTCTCTGAACCGGTTCGCCTGGATAAC 57474 30 100.0 36 .............................. TATATAATCACTTCTTTATTTCCCCAGTCAATATCT 57408 30 100.0 36 .............................. TCGGAAGTACCTGCTGCCTGGCCACTTCCAGAAGCT 57342 30 100.0 38 .............................. CATCATCCACCATTGTCAGCAGTCCTCTTCGTCTCCAT 57274 30 100.0 36 .............................. CAGGGCATGGAGAACAGACGAAAAGAAATGAACTTA 57208 30 100.0 35 .............................. ACTCTTTCTTTGACTGTCCACTCGTGCCGCTGCTA 57143 30 100.0 34 .............................. TCAGTAGACCATCTACAGGTGGATTTTTCTTTGC 57079 30 100.0 37 .............................. TCGGGATTGCTTTGACCTGTCTTGAGTGTTCCGGCTA 57012 30 93.3 0 .................A....G....... | C [56986] ========== ====== ====== ====== ============================== ====================================== ================== 11 30 99.4 36 GTATTAATAGAAACATTGTGGAATGTAAAG # Left flank : TGGTGAAAAAGAATATGAAGGTTTCAGGATATGGTGGTGAATTATGTATGTAGTTTTGGTTTATGATGTAAGTCAGCAGGAAAATGGTTCGAAGCGTTGGTCGAGGATTTTTAAGATTTGTAAAAGGTATTTAACGCATATCCAGAATTCTGTTTTTGAAGGTGAAATTTCTAAGGCTCAGTTGGCACAGTTACAACAGGAATTTAAGTTCTGTATAGATAAAGAATTGGATTCTGTGATTATTTTTAAATCAAGGCAGGAAAAATGGTTGGATAAGGAATTCTGGGGACGGAAAGATGATGCAACCAATTTTATTTTGTAATTGTCAACCTACGATATGGGAAAAATCCCGGGAGGTTGACAAAGCCTTTATTTATAAGGAAAATGGAAGTTTTATAGAGTGTTATAATATCTATTTTGTGTATAAAATAATTGTAAATGACAAGGTCGACAGAAAATGGTAAAATAAACGATGTATTATAGGTGAATGTGGAGCACGG # Right flank : ATCAAGAACAATTTTTTACATAGGCATTCTTCCCCATTTCCCCCCCTTAATGTTAACCCCACGTTAAACCTTCGCAAAGTCCATTGTATTCCAATTTTTCCATCCCGATAATATACGCAGATAAAGCAGTTTCAGGAGTTGATGAGATCTGAATCTGAAGAAGCTGGCTGGCAGATCAGAGCTCATATATCAGAGTTCGTGTAAGGGAAGAGAGATGGATAGCAGTATGGACAAAGTTCTGACGGTGATCGTACCTGTCTACAATATGGAAAAATATATCCGGCAGTGTCTGGAATCTCTGGTAATCGGGGAGGTGCTGGACCGGATCGAGGTGCTGGTGGTGTTGGAGGGCTCCAAGGATGGTTCTGCGGAGATCGCGTATGAGTTTGTGGAGCAGTATCCGGATACCTTACGGATCATTTATAAGGCGAATGGTGGTCATGGTTCAGCGATCAACACAGGTCTTATGATGGCGTCCGGTGAGTATGTGAAGATCCTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATTGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 40203-41288 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUM010000007.1 Blautia massiliensis strain MSK.18.38 NODE_7_length_138860_cov_40.3061, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 40203 32 100.0 34 ................................ TCCTCTCAAAAAAGAGGACGATCACTCGCCCTCT 40269 32 100.0 33 ................................ TTCGATGAGCTTTTCTGTTTCTGCGATATACTC 40334 32 100.0 34 ................................ CTTTATTGTCATGAAATGCGAAGGCTTCTCCATG 40400 32 100.0 34 ................................ TGCAGTTACACTGTCGGCTGCAAGTGCGGCCGTG 40466 32 100.0 35 ................................ CTCAAGGGAATCCCATTTGCGAAGCAGGGCTTGCC 40533 32 100.0 34 ................................ GGTGTGTCTATCGTCATAAATTCAAAATTCATTC 40599 32 100.0 34 ................................ TGCCATTCTGGTTCCTCCTTATGTTCTGATTTCC 40665 32 100.0 34 ................................ AAAACAGAAGAGGACAAGCAGCTCTACGAAGAAC 40731 32 100.0 34 ................................ TATCACAGGTCAGCAGAAAAGTTGTGGTACATGT 40797 32 96.9 34 .............................G.. CATAGTAAATGGTATTTGTAATAGGGCTAACACC 40863 32 100.0 34 ................................ TGCCATTCTGGTTCCTCCTTATGTTCTGATTTCC 40929 32 96.9 34 ...................A............ CTGGATATGACCTTAATTTTTTTTCGCATTTCGT 40995 32 87.5 34 .........T...CA....T............ CCCGATCACATATGCGATCACTGTAGCTCCAGCC 41061 32 93.8 33 .........T...C.................. GCAAAGTAGTTAGCTGCATTCTGGTAATATGCC 41126 32 90.6 34 ............ACA................. GAGTGTAGAAGATAGTGATAGCCTGGTTGATGAT 41192 32 100.0 33 ................................ ATCAACGCAAAGAGATTCGTGGAGATTGAAAGG 41257 32 93.8 0 .............T.........A........ | ========== ====== ====== ====== ================================ =================================== ================== 17 32 97.6 34 GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Left flank : AGGAGATTTGGACAGTTATCCAGTGTTTTTGTGGAAATGAGGTGACAAAGTGTTGGTAGTGATTACTTATGATGTAAATACAGAGACAACTGCAGGAAGAACTCGTTTGCGTAAAGTGGCGAAGCAATGTACAAATTATGGAAGAAGGGTGCAAAATTCTGTATTTGAGTGTATTTTGGATAGCGCTCAAAGTGTTGCTTTGAAGGGGATATTGTCTGATATTATTGACAAAAATAAAGATAGCTTACGTTTTTATTACCTCGGAAATAATTATCAGACTAAAATAGAACATGTAGGTATAGAACGTGGAATTCCAGTAGATCAACCTTTAATTATGTAGGTGCGAATCAGAAGTACACATAAAATGCCGGCAGGATTCGCACTACAAAAATCAGAAAAGTAACATGAATAACACTAAAGAAAAGAGAGAAGGGATAATAAAAAGTAGAAAAATTATATTTATTGCATAAAAAAACAAAGAATATTTGTGAAAATTTGCC # Right flank : TAACAAAGAGGAAATCAAACGGTGTGGTACATGGGACATTCCCTATGCGGGGACAAAAACCGGAAATCGCAATTAATACTTGCATTTAACAGACATTGGTGTTACAATGAACGAAACTAAGAACTTGTTGGCATAGGAGTGGGCGAGAGCCCGCTCCTATTTGCTGAGAAGGAATTTGTTCAGAAATAGGCAGAAATAGGAAAGGCAGGTGGGAAGCATGAGCAGACGGGAAGAATATGAACAGAAGACAGAGGCGATCCTTACACCAATCGTGGAGTCCAGGGGCTTTGAGCTGGTAGACGTGGAGTATGTCAAGGAAGCCGGAACCTGGTATCTCAGAGGCTATATCGACAAGCCGGGCGGAATCACAGTCAATGACTGCGAGGACGTAAGCCGTGCATTCAGCGATATACTGGATGAGCAGGATTTCATCGAGGACAGCTACATTATGGAGATCAGTTCTCCGGGACTTGACCGGCCTCTTAAAAAAGAAAAAGACT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //