Array 1 69988-69350 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOXS01000021.1 Elstera cyanobacteriorum strain TH019 C539, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69987 29 100.0 32 ............................. CAAAATTAGCTCGTGCCCGGCGCGATAAAAAG 69926 29 100.0 32 ............................. CGCCCGCAGCTTTCGGACCTACGCGAATCCGG 69865 29 100.0 32 ............................. AAGAACAGATCGGCTCGACTTACAGCAAGGCG 69804 29 100.0 32 ............................. AAGACTTGCTTATCGGTTCGGATTGAAAGCGA 69743 29 96.6 32 .............G............... GACGGCGATGTGCCGATTGTTTTCCCGACCAC 69682 29 100.0 32 ............................. TTTGGGGTTACGATTGCGCGGTTACAAGGCGA 69621 29 100.0 32 ............................. CTGATGAAATTCCCGCCGCGCTGCCCCAGGGC 69560 29 100.0 32 ............................. GTCGAACCGCCGCCGGAGGTGACGAAGGTTGA 69499 29 100.0 32 ............................. GCTGCCGAACTCGACTTCAATATCATGGTCAA 69438 29 96.6 32 .C........................... CGGGCGGGGCTGGACGGGCCGTGGCAGGAGGC 69377 28 93.1 0 .........................-..T | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.8 32 GTGTTCCCCGCACCTGCGGGGATGAACCG # Left flank : CTGTTGGAGCGGCTGATTCCCCTGATCGAAACCGTGCTGACCGCCGGTGAGATTGCCCCGCCCACCCCGCCCGAAGCGGCACAGCCTGCCGCCTTCGACGATCCGCCGGCGTCGGGCGATCTTGGGCATCGGGGTTAGCGCGATGGTGGTGATCATCGTCGAAAACGCGCCGCCCCGTCTCCGCGGTCGCTTGGCGGTTTGGTTGCTGGAAGTGCGGGCAGGCGTCTATATCGGTAGCTACTCCGCTCGCACCCGCGAACGCCTTTGGGCCGACGTGACCAGTATGATCGGCGACGGCAATGCCGTCATCGCCTGGGACGCCCCCACGGATGCCGGCTTCGCCTTCGATACTTGCGGGTCGAACCGACGAATTCCTGTCGATTTCGATGGCTTTACGCTTGTATCTTTTCTAGCCGAAGCGTCGCCCTCGGACGGGCGTTAACCTCGGTAAATTCTTTGACAATGTAAAACATAAGCAATTACAATTGCTTCTACGAAGA # Right flank : AGACCTCGATGAGGGTCGCCCCGACATCTACCGCGCGCCCACCGCGCGGGCAGGTGGGTTTGTCGTTGCCAGCCGTTCTGCAATCCCGAAAGATAGCGCCCGAAAGGGATGCAGAATGACCGAGACTTCTCGCCCGGCCAGCCCATCGGCGGGGCTGCGGGTTGTTGGCGATCTTATCCGCGATGTTTTGGTGGTCAGCGGCCCGCGTTTTTGGGGGATTGCCGTGCTGGCCAGCCTGCTTGCGCTAGTGCAGGGCGGTAGCCTGCTGCTGCTGCACCCGATCTTAACGCTGCTCGGCCTTACCGGCGCGCCGCCCAAACTCCCTTTCCTGGCAGCGGCGGGGCAGGCGCTTGGCCTATCGGGGGCGCTGGCGATCTATCTTGCCGTAGCCCTCGTCCTAGCAGGCTTGGTCTATGCCCATAGCCTCGCGGTGTTGCGCCTCGTGATCGACTATGGCGACTCGTTGCGGCGCCGCCTCTATGACGCTGTGATGGCGATGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 77209-76447 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOXS01000021.1 Elstera cyanobacteriorum strain TH019 C539, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 77208 29 96.6 32 A............................ AAGTTGTCCTCATGGTAGACCCGGATGAGGAC 77147 29 100.0 32 ............................. CTGCATTGGCGTCTGAGATCGCGCCGCAAGGA 77086 29 100.0 32 ............................. GAGCAGGTGGCGGCGCAACTGCTGGTCTACGG 77025 29 100.0 33 ............................. GCCAAAGCCTAACCACCTGCACCCCCGGCTTGC 76963 29 100.0 32 ............................. GCACGACGATGAGCGCGTTGATTATCGAGGCA 76902 29 100.0 32 ............................. CGCCTTTAGCCAAGCCTTCCAGGCCAGCCCCT 76841 29 100.0 32 ............................. CGCAGGGTGGTTTGCGCTGAGGCGGGCGGCAG 76780 29 100.0 32 ............................. AAGCAACAGGTCGATCCCGCCACCGGCGAAAC 76719 29 100.0 32 ............................. CAGAACCGTCCATTCGACATTGCTGCCCTCAA 76658 29 100.0 32 ............................. CTGAAATCCGCCACCGGCGAGACCATCCGCAA 76597 29 100.0 32 ............................. CTGCCCGTCGCCAATCTGCCCGCCGTGGCCCT 76536 29 100.0 32 ............................. ATTATGCCGGTCATTGGGCGGGAGCCGACCGA 76475 29 72.4 0 ...CC.......CCT.........TT..C | ========== ====== ====== ====== ============================= ================================= ================== 13 29 97.6 32 GTGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : AACGGCTCGGCGGTATCAGCAAACAGGGGGACGGATATCTCCGCAAGCTGTTGGTCGTCGGTGCTACCGCAGTGATCCGCATGGCACGCAGGGATGCAACGCGCCAGCCTTGGGTCGCACAACTCCTTGAGCGCAAGCCAGTGAAAATCGCGACCGTCGGACTCGCTAATAAGACCGCGCGCATTGCCTGGGCGGTAATGACGCGCAACGAAGTCTACGCGGCAGCCGCCGCGTGACCGATGTCCTTGCCGTTTACTGAAGCGGCGGCAGGACGGTGTAAGGGCAGCTGAGTAGTGATGACAAACCGGTCAGACCGGGGATCGGACAAGCCCAGGGGAGCACGGCGCTTCGAGCGCGATGACGTGATTAGGGATCCGATCCGCGGACTTCATCAGGGCCAGCAGCCATGCGGTGCTGCGCGAACAGGCCGAACACATGGATGCACCCGACCGGTGCCTATCGCTCCACAAAAGCTCTTGCATCGCAGGGGCCGTCCACAC # Right flank : CTTGACGCTCGCTTCTACCCCTGCTTCCATTACTGGAATGCAGGGGTGGCGAGCGCCCGCCGAGTCCCCGAACAGGCAGTCGTGCAGGGTGCCTCTGCATGACTTCCCTATGATCCCCCCAAAACAAATTTCGCCTCCTTACGGGCTTGGGAGGCCGGGGGGAGCTGCTAACCTTTTGGGGTGATCCATCGCTGTGCCCGCGTCGGCCTCCAAGGACGGTGGCGCAGAGAGGGCGGGCGCGCGCCCTTATCATCGGGTATCGAGACAGATCTAAGGGGCGTTGACCGCACCTGCCTCCCGTTTTACGATAAAATCAAAATTAACCTCTTGCTTAGCGAGTTTTGCCTCGCTACGCTTTCTCTTATGGTTGCTCAACCCCATAATTTCTCCCTTATTTCAGAGGCTTGGCTGCCCTATCGCCGCCTGTCGGGGGAAAGGGGGTGGGCGCGGCCCGCGGAGGTTTTGGCGGCGTCGGAGGATCCGGTGGTTGCCGTGGCCTG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 78875-78602 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOXS01000021.1 Elstera cyanobacteriorum strain TH019 C539, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 78874 29 100.0 32 ............................. CCTAAACCGCCCCCGATAAGCGCCGCGATTAG 78813 29 100.0 32 ............................. CTCAGATGCGCCCGGAGCGATTCCACGTCATG 78752 29 100.0 32 ............................. GCGAACGGCTTTGCGATATGGCGGCGGAAGAA 78691 29 100.0 32 ............................. GATCGGTTATCCTCGCGTACCGGCACGCGCAC 78630 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : CAACGGCAATCTGCTCGATCCGCTGGCGGGCTATAGTCTCGGCAATAAGCCCTGGTCGAAGGAAGCGGATATCTCCACCCGCTTAACCCAGGAAACCAGCCGCGTCCGCCTTATGCGCTGGCAGGCGGGGGCCTTGCAGCCCTGGGCTGCGGCGGCAGACCCCGCCCACGCCTGGGCGCTGTCGGAACTGCGCGTTTCCCGCACCCGCCTCGCCGCCGCCCCGCCGCCGCCGGAGGTGCCCGCGGCGGCCCTGGCCGACCTGCGCGCCCGCTGGGGCCGCTATGATGCCGACTGCCTGCCGCTCCTCCTCTCCCCCAGCCCCGAAGCAGGCTTGTTCACCGCTACCGTCGCCGACGCACGCGGCCGCCTCGGCACCGCCTCCTACACCCCCACCCTCGGGTTGATCCTCCCCCGCGCTTGACTCGCGCAGAAAGGGTGTTAACCTCGGTAAATTCTTTGACATCGTAAAACCAAAGGAATTACAGAGAGTTCTAGGAAGA # Right flank : CGACGGAGCGAGGTCGACATCCAGCTCGAGACGTGATGTCGTGGACGACCCCTGCAGCAGCGTAGCTATGCAATGATGTGGTCGTTGAGCCACGTCTAGGAGTCGATCCATGCAGCAGGATATCGTGACCGTCGGTGTCGATCTGGCGAAGACTGTGTTTCAGATCCATGCGATCAGCGCTGAAGGGAAGGTTTTGGTCCGTCGGCAACTGCGGCGGGCCGAGGTTCTGAAGTTTTTCGCCGCTTTGCCTCCTTGCTTAGTCGGGATGGAAGCCTGTGCATCGGCCCATCATTGGGGCCGGGAAATACGCGCCCTCGGCCACGAAGTGCGGTTGATGCCGCCCGCTTATGTGAAACCATATGTGAAGCGTGGAAAGACAGATGCCGCTGACGCGGAGGCGATTTGCGAAGCGGTAACTCGGCCCACGATGCGCTTTGTGGCAATAAAGAGTGTTGAGCAACAGGCGGTGCTGATGCTGCACAAAACGCGCGATCTGCTCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //