Array 1 21311-19252 **** Predicted by CRISPRDetect 2.4 *** >NZ_AULT01000023.1 Oceanospirillum beijerinckii DSM 7166 H579DRAFT_scaffold00017.17_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 21310 29 100.0 31 ............................. GGAGGGGTTAGCGCAGATATAAATACAGGTC 21250 29 96.6 31 ............................T ATTTTCTCATTAACGTCTTTTAGGATGTCGC 21190 29 96.6 31 ............................G CCAACAACTGCAGCACCGTATCTGGCTGACA 21130 29 100.0 31 ............................. TGAGCATAGATCACATGAAGGGCAAATTCTA 21070 29 100.0 31 ............................. TCGCCGTGCCTGCCAGGGCTGTGGCGTTGTT 21010 29 100.0 31 ............................. GACAGCTGGCCGCTTCTTTCAGCTTACGAAC 20950 29 96.6 31 ............................T GCAATCAGAATTCCTTTGCTTTGTTCTAATA 20890 29 96.6 31 ............................G GCTAAAGCTCCGCGCAAAGGCGTAAGAGCAA 20830 29 100.0 31 ............................. CACCGCGCAATGTGATCTGTGATGTTATGGA 20770 29 96.6 31 ............................G ATGACATACGTAATGTTAACGAGCGCGTCAA 20710 29 100.0 31 ............................. GGTACCTGCAAGAGTATTGATATCAATCGAT 20650 29 100.0 31 ............................. ATACGCTGCAGCAATCCGAAAACATAAGCGT 20590 29 96.6 31 ............................C TGCACGTTTTGCAGCGCGTCACCGATGGCTT 20530 29 100.0 31 ............................. ACTGGCAATCTAAACCGGAAAGGAGCCACGC 20470 29 96.6 31 ............................G CATGACATCTAACCCGATTTTTTAATAATGC 20410 29 100.0 31 ............................. TTAGAGTACACCCATTACGCCTTCAGTGACG 20350 29 100.0 31 ............................. GTTAATGTGCCCATGTTCAGCATCACATTGA 20290 29 100.0 31 ............................. GTATGTGTTGTGCTTTCTACCGCCAACCCAG 20230 29 100.0 31 ............................. GCTCCCCAGCTTACTCTGATCAATTCAAACA 20170 29 96.6 31 ............................T CTTTGTGCATCTCTAACAAGTAGTCATTAAC 20110 29 100.0 31 ............................. TCAGCATTTCCAACTAAATCAGCATCCCGAT 20050 29 100.0 31 ............................. GGAGTCAAATCGCAACTTATTTGTTGATCAG 19990 29 96.6 31 ............................T GACCGCCACTGGTCGACACAGAGAACGACAC 19930 29 96.6 31 ............................G GCGCGGATCTGGCACAGGATAGCTTAGGCTT 19870 29 100.0 22 ............................. GATACAGAATCAGCCATGGCGC Deletion [19820] 19819 29 100.0 31 ............................. GTTATCCACCAGCCAGCTAAAAAGGCTTAAC 19759 29 96.6 31 ............................T GACAACCGGTATGCCAGGCAAAAGGGCTGTT 19699 29 100.0 31 ............................. GCTGGCGCAGAGCGTTGGTATGGAACACCCT 19639 29 100.0 31 ............................. GCTGGCGCAGAGCGTTGGTATGGAACACCCT 19579 29 100.0 31 ............................. AAGACTTCATCAAAAGCATCAAAGACTTCAA 19519 29 96.6 31 ............................T AGCGGCGGTTTTATGAGCTGATAACATTCCA 19459 29 100.0 31 ............................. TAGCCCGGTTTGCGCTGTCCAGTGTCTTCTC 19399 29 100.0 31 ............................. TAATCAGGAAAGCCAACGGCTATGGCACTAT 19339 29 93.1 31 ...........G................G TTGTTATACAACATTGAGTTGTAGGCACACA 19279 28 75.9 0 ..........ACGC..........-..TC | ========== ====== ====== ====== ============================= =============================== ================== 35 29 97.9 31 GTTCACCGCCGAATAGGCGGCTTAGAAAA # Left flank : CTCAATCGCTTAATGGATGAAAACTGGTTGAAGGGACTACGAGATTACACTGAGGTTTCTAAGGTGAGCTCAATTCCAGATCAGGTACAGCACATTCAAGTTAAACGTAAGCGTCCTAAACTCACGGCTTCTCGTCTACGTCGGGCCGTCAAACGGGGAGCTATTTCAGAGGATCAGGCGGAAGAGTTACTGATGGAAGACAATAAGGAGCAGATCGAAAATCCTTATTTCAGACTGCAAAGTCAGTCGACAAATCAGAACTTCCCCTTGTTTATTGAGCAGAGTCAACCACAGGAAAATTCGGTCAGTGGAAGCTTTAATGCCTACGGTATTAGCCAAACTGCGACTGTACCCTGGTTCCCTTAGTTTTGACCCTTTTTTTGGAGCTATTTTTAGCCCCTTATAAATCAATAAGTTAGCGGTAGACTCAAAAAAGGGTCTAACCGCCGATTTTTCCCCTTGTTCTTTAAAAATCAGAGAGTTACCGTTTTAATGTTCTA # Right flank : GATAGGGCTATTTCTGTTATCTGGAGATCATTTATGCTTTGTGTTCGGCTATCTGCGAGTTTAGGCAAATACAGTTACGGCCGTTGTCTTTTGCCTTGTACAGTGCTTTATCTGCTAAGGCGATGGTGTCTTCAGCATTGTTGAGTGCTTCTGAAAACTGTACGACACCGATGCTAACGGTGACTTTTAATGTACCTTGCTCTGTGACAATCTCGCGGTTACTGGTGTTCTGCCTCAGGCTATCCAGTATGTTAAAGGCTTGTGCTTCCTGTAAATCGGGTAGCAGGAGAACGAATTCTTCTCCGCCCCAACGGGCGGCGATATCGTGTTGGCGTATGCTGGAGCTGACCACTTCGGCAAAGGCTCTGAGCACTTGATCACCGATATCATGACCATAGTCGTCGTTCACGGATTTAAAGTGATCCAGGTCCATAATGGCAACGGTGAAGGGTTGTTTGTCTCTTTGATATTGTTCAATTTGGGCATCAAAGTGCTGCAGA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.99, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGAATAGGCGGCTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //