Array 1 182131-178994 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWNQ01000004.1 Klebsiella pneumoniae strain VRCO0195, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 182130 29 100.0 32 ............................. GCGATCATGCCGTAGTCTTCGATCACGTAATC 182069 29 100.0 32 ............................. TTTGCCTTCCTGTCTGCAGAGGCGCGGACAGG 182008 29 100.0 32 ............................. CGTAGCTAAAATTAACTGCATTCGGCGCACCT 181947 29 100.0 32 ............................. CCAGCTCAATTTCCGCCTGTCCCGCCAGCGCC 181886 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181825 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181764 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181703 29 100.0 32 ............................. ATTAAATTTTTCGGGTAAAGAGAAATTGCGAA 181642 29 100.0 32 ............................. CTGCGAGCTACCCTGAATTTCAGCGACAGGGG 181581 29 100.0 32 ............................. TAGTGCCATATATTATCCTCTGCGGTATGACT 181520 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181459 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181398 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181337 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181276 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTACAGGTAATACGT 181215 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181154 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181093 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181032 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180971 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 180910 29 96.6 32 .G........................... TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 180849 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 180788 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 180727 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 180666 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 180605 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 180544 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 180483 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 180422 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 180361 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 180300 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 180239 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 180178 29 100.0 32 ............................. GATCCCCCGGAGGAGACTGATCAAACCACTCG 180117 29 96.6 32 ............................C CGCTGGTTAATGGGCTTCCCGGAAGGGTGGGC 180056 29 100.0 32 ............................. TCTATCGCAACCACCGCTGAGGCGCTGATTGA 179995 29 100.0 32 ............................. CCGCTCCACGGTGAGCGGCTGTTCAATGTAGT 179934 29 100.0 32 ............................. CATCACGCGCTGGCCAATGTGTTAAACCAAAT 179873 29 100.0 32 ............................. GGCATCATTCTCTTCGCTACTCCCGCCGATCA 179812 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 179751 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 179690 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 179629 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 179568 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 179507 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 179446 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 179385 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 179324 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 179263 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 179202 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 179141 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179080 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179022 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 52 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCACGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //