Array 1 2054517-2061910 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033236.1 Saccharolobus solfataricus strain SARC-H chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2054517 25 100.0 37 ......................... TCACATCCCTCACAATCCATAATGAAAATGTCGGCAT 2054579 25 100.0 38 ......................... ATTTTAGCAATGCAATAGATCAACAATTGAAAGAAACT 2054642 25 100.0 39 ......................... ATTTTCATCTCTTGGATTGAAAATAAATGAATTTTCTTC 2054706 25 100.0 41 ......................... TGTTTCACAAATTTCAAACTTGCAAACGCAACAATTAAATA 2054772 25 100.0 40 ......................... GTTTTTGGTCAAATATTTGGACAACACTTACAAGAATTGG 2054837 25 100.0 38 ......................... TAGTCAACGACAAAGTGCTTAAAACCCGTGTTATACTC 2054900 25 100.0 39 ......................... GCTGTAATAGTCGCAATAGCAAAAGCCGAAACAATGAGT 2054964 25 100.0 41 ......................... CAATAGAATTTTTCTTAGTTGGCATTGACAAGTATAATTCT 2055030 25 100.0 40 ......................... CAAAATTCCAAACTTTGGGAATTTCTAGTTTCCAAATTTC 2055095 25 100.0 39 ......................... TTTAAACGCCTTGCAATGGTAGAAACATCAGTAGAAGAC 2055159 25 100.0 41 ......................... CGCTTTCGACTGCGACAACTGTCGTTTGGCTCATTTGTTGC 2055225 25 100.0 38 ......................... TTATTTCAAATACTATTATCTCCGCCATATGTTTACAT 2055288 25 100.0 38 ......................... ATTATCTGCAATTTTAGCAACTGAGAGGGCAATAATTT 2055351 25 100.0 40 ......................... TTTTTTCTTTAAAAGCTCTAGGCAGTTCATTTCTATTTCA 2055416 25 100.0 39 ......................... CATGCCAAATTTGTAATCCCTAGCTTGCTGAACAAAATA 2055480 25 100.0 44 ......................... AGTACTGATAATCTGAAGGTATTGGACTAGAACCCATGAAGTTC 2055549 25 100.0 37 ......................... GCTTTAACTTGGTACGCACTTTACGCCATGATAAACG 2055611 25 100.0 39 ......................... GAATTTTGTGTTACTGCAACGCCAAGATTTTCAAATGTT 2055675 25 100.0 36 ......................... GTTGAATTTTTGCAACTGGTATGTTGTATTTTTGCA 2055736 25 100.0 42 ......................... AATTTGTTACACGGCTAGGATTTTTTTTCCTAGATGTACAAT 2055803 25 100.0 38 ......................... TTCTAATCTTTTGCCCATTACTGCATCATATCTACTAG 2055866 25 100.0 38 ......................... ATCTTTACCTTTATATAAATCTTGTTCGTAACAAATAA 2055929 25 100.0 37 ......................... ACAAAACGAGGAGTTTATAGTAAAATCAACTATGAAA 2055991 25 100.0 35 ......................... ATTATTTGAAGAGAGGGTGAGAGAAGCATGAAAAG 2056051 25 100.0 36 ......................... AACTACAACGAGGTGAGAAACGATGACTAAACGTTT 2056112 25 100.0 38 ......................... TTTAACCAGCATAACAGCATCTAAAAGAATGGGAATTG 2056175 25 100.0 36 ......................... TAGATATATGGCGATGAATTGCATTAGTCAGTGGTG 2056236 25 100.0 39 ......................... ATTTTTAACGCTATGACGCTAGCCCTCATGTTAGCTTTT 2056300 25 100.0 37 ......................... AAAGTTTGTTCTTCTGTTTCGTTTTGTTGTTCTGACT 2056362 25 100.0 38 ......................... CCCCTTTTGCCGTCTTTTTAGTTACCACAATGCACCAA 2056425 25 100.0 39 ......................... CCGTATCCAGAAATAATTAACCAATCGCTTGTTTGTGAC 2056489 25 100.0 37 ......................... AAATTAACGTAAAGAGGGAATTTCTCGCACCTATCAA 2056551 25 100.0 42 ......................... GAATAAACATTGGTACTGTACTTTGTAGTACTGCATACGGTG 2056618 25 100.0 39 ......................... GCATCTGTCGGCAACCTCACTTATTCACGTGGGGGTGCG 2056682 25 100.0 37 ......................... TCTCTCAGAAACTCCCAACAAATTTGCTATTTGTTGA 2056744 25 100.0 39 ......................... TGCAATTTGTTGAATTGAATAACCTTTTCTAATTAGTTG 2056808 25 100.0 42 ......................... TTGAACTTGTAGAAATTGTTCATATGAAACAGCATAATTTTC 2056875 25 100.0 40 ......................... TTTACAGTTAATGGAATTCCTTTTTGTGCATACAATAACG 2056940 25 100.0 36 ......................... CTCATTATTTCATCATAAAGATTATCCACTGCAATT 2057001 25 100.0 39 ......................... ATGCATTCCACCTCTGTTTCTTCCTCTTTACGCATTTCT 2057065 25 100.0 36 ......................... CTCTATATTCTACTATCCTCCCTCTCTGCTCTGGCG 2057126 25 100.0 39 ......................... ATCTCTGATTTCTCAGTTCTCTAATTCCGAATACTACAT 2057190 25 100.0 41 ......................... TAAAACTGCTCAAAAATGCTAGAATTATAATTATGGCTATG 2057256 25 100.0 41 ......................... ATTTTGAATGTTACGACTCTCGTCATTTTTCCACCTCTTCT 2057322 25 100.0 36 ......................... GGAGTAATCTTTCCAGTCAAAAGACTTTCAGCCCTC 2057383 25 100.0 36 ......................... TTTATAAGCTTCAATAGAGCTTTATCTTGAGCAATC 2057444 25 100.0 39 ......................... ATAAATGGTACGTCTTCAGGCGGAAAGCCTTCCATTTGT 2057508 25 100.0 34 ......................... ATATTACCTTGCTGGATAAAGTTAATGATTTCAT 2057567 25 100.0 38 ......................... ATCTTTAATAAATCCTCCTTTATTCTCATGTAATGCAT 2057630 25 100.0 40 ......................... TTATATTACGATAAAAGTGCCAGATATGGTTGTTGGCATT 2057695 25 100.0 40 ......................... CCCACCAGAAAAAAAGAAGGGTGGGGGGCAAGGGCCCCGG 2057760 25 100.0 40 ......................... GCATATATTATTGGCTGAGGTAAGGTCGGCATATCTGTCG 2057825 25 100.0 39 ......................... CCATCCAAGCCTTGATTTGATATTCCTTTTAATGTCTGC 2057889 25 100.0 40 ......................... TTCATTATCCTCAATTTTTTCTATACCCTTGTTGTTCATT 2057954 25 100.0 39 ......................... CCCCACTGGAATGCACCATTTCTTGCAAGTAATACATTT 2058018 25 100.0 40 ......................... ATGCAGTTTGGCCTAAAGGAATATATACGTTAATGTCTGC 2058083 25 100.0 38 ......................... CCATTATTCGGCACTGCATTTAATTGAAGCACTATACT 2058146 25 100.0 39 ......................... AATATTTTGAATATTTGTACACCCATATGAAAAACGCAG 2058210 25 100.0 37 ......................... TATCTCTTATTCGTAAGGGTTAAAACAAAATTATCTT 2058272 25 100.0 35 ......................... TTTTTATTTAAGAACACTGATGGAAAGATCTATAG 2058332 25 100.0 37 ......................... ACCCATATTGAAGAGTTTGAGCATAAAAATGATTCTA 2058394 25 100.0 38 ......................... TGATTGCGTTACGTCACCATGGGGCTATTCGTTCTGAT 2058457 25 100.0 39 ......................... TTAATGTGAAGAAAATTGTTAAACGCGTTTTGCGACATT 2058521 25 100.0 40 ......................... CACTACATCTATTGTTTTTCCTTTTGTAAGACATTCCTCA 2058586 25 100.0 40 ......................... CTGTTATTACGTCTCTAATTGCCACGGGCTTAAAAAGCGG 2058651 25 100.0 39 ......................... ATCAATTTACGCCTTTTAGAAATCCAATTTCAATTATTC 2058715 25 100.0 42 ......................... GAAGCAATAGCCAACCCACAAAGCTGACACTATTCATTCGTC 2058782 25 100.0 38 ......................... GTATTCAAAAGAGAACTGGGGGATTCAAGGTAATACCT 2058845 25 100.0 36 ......................... CTCCGTAAGGCCCCCATACAGTAAAGTAGCAGTTTT 2058906 25 100.0 37 ......................... ATAGAAATATAAATCTCAGCAATTCTTGATATATTGT 2058968 25 100.0 36 ......................... TCCGTTATCATGTTGACTGGAAATGCGTTTAATAGT 2059029 25 100.0 39 ......................... ACCCACAGCACATTGCCATATCCACTAAAATTATACTGA 2059093 25 100.0 38 ......................... ATAAATATGTTAACGAATGTTGTAAATTGGTATTCGTT 2059156 25 100.0 38 ......................... AAAGGAATAATAAGCATGAACCGGGGAGTTCACGCTTT 2059219 25 100.0 38 ......................... TCAAACTCATGAAGCTACTGTAATCCATTTCACATAAA 2059282 25 100.0 38 ......................... ATCATTTCGTGAAATTTTCGCAACAAACGAAAAAAATT 2059345 25 100.0 40 ......................... ATTATATTGATAAATTGATAAGAATGCCCGAAAATGATTT 2059410 25 100.0 42 ......................... AAAAACTTTTCACATTCGACATTAAAAAATAAAATAATTTTG 2059477 25 96.0 39 ...............A......... AATTCGTATACCTTAGTAGTATTATCATCAATATTGTAT 2059541 25 100.0 39 ......................... TTCTCAATTGCCTTTCCCACGATAACCTCAATCCAGTAG 2059605 25 100.0 37 ......................... TCTACGTTGTTAAATTCATATACAGCTTGGCTCATAT 2059667 25 100.0 38 ......................... ACGTATTTAAATTTTTTGGTAGTACTTTCCTTGTGTAT 2059730 25 100.0 41 ......................... AGTATACAACAATGCAATAAGTGTTGATAGCTTTGCATCTT 2059796 25 100.0 40 ......................... CGCTTCTCCGTCTTTTCAGTTATAATGCGTAAAAGCTTAC 2059861 25 100.0 37 ......................... CAGCAAGAAGTTCACTCTCTACATCTTATGATTTCGG 2059923 25 100.0 36 ......................... CGTTTTCGTCTGGATTATTTATTATCTCTAAGCCCT 2059984 25 100.0 36 ......................... ACCTTTATTTTAAGTCCTAGCCTCTTCCCTATCCAT 2060045 25 100.0 38 ......................... TTGTTTCACCTCCTTATTAAAAGCGACAGACGGTCGAC 2060108 25 100.0 37 ......................... TCATTTCACTGTGTAGAGGTTGAACACCTAATTTTTT 2060170 25 100.0 40 ......................... CTTTGATTGTCCGCTCTCGTTCTTTTCCACACTGAAGATG 2060235 25 100.0 38 ......................... AGCTTTATGACACTCATTATCATATACTCAAAATTATA 2060298 25 100.0 40 ......................... TCGATTTTTTTCGAGGATGGATTTGTTTCATGAAAGAGCC 2060363 25 100.0 39 ......................... CAGCTCGACGATGACGAATACAAGATGCTGTATAATGCG 2060427 25 100.0 40 ......................... TTTCTCAACTGATCCACGGCTTCAGAGAAGATGTTTGGAT 2060492 25 100.0 39 ......................... GAACGAACATGGTAAGCCCTGAGGACCTTGAAAACGATG 2060556 25 100.0 40 ......................... CTCAGCAGATTTAAACTAACGATATTAATTGTACACACTG 2060621 25 100.0 39 ......................... TTAAGTTGTTTTGCTCTATTTAAAACAAAAATAATCCAA 2060685 25 100.0 39 ......................... CAAGTGCAATAGCAAACTACTACTAAATATAACATATAT 2060749 25 100.0 38 ......................... CTATATGGGGTCAGGGTGGAACTAAAATCGTGGCTTTA 2060812 25 100.0 39 ......................... CTTACTTAAGCCTAATATCTCCGCAACTTCATCAATAGT 2060876 25 100.0 41 ......................... GAACTCTCTATTGCTGACGAACTAAGAGAAAATTGTTTCAA 2060942 25 100.0 38 ......................... TCTAACAATGAATCTGTCATAAAGTGCCCGCAACTCTT 2061005 25 100.0 36 ......................... AGATTATCAATCAAGTGATAGAGATATTGCAATTTT 2061066 25 100.0 39 ......................... TGTTAGATACGGCAAGGCAAAGATTACAAACAAGGATGT 2061130 25 100.0 39 ......................... AAAATGGTGCTTATCGCTATTAGGTAGTCGGCGTTGTTT 2061194 25 100.0 36 ......................... ACTACTCTTACTTTTTGCATTCCTTTTGGAGTAGGC 2061255 25 100.0 39 ......................... TATTTACGTGCATAAAGAACATACCTCCAGCGCCTCCTC 2061319 25 100.0 37 ......................... TCGTAAACTTGAAACTGACCCGTATATCCGAATTTAC 2061381 25 100.0 39 ......................... GTATTATTCTCATAATAGGAACCGCCCTAGTGTATGCTA 2061445 25 100.0 37 ......................... CGTGATTACATGGAACATTACTTTTCCACCGAATATT 2061507 25 100.0 39 ......................... TTTATGTTTTCGAGTTCTTCTGGTCTTAACATCACTCTA 2061571 25 100.0 36 ......................... GTCAGTTATACGCTACATATGAAAAGATAAATGAAG 2061632 25 100.0 38 ......................... ATCTCTCTTAGTTTTGTCAAAGCTTCTGACCCGCTCCT 2061695 25 100.0 40 ......................... TCTATCTTTATTGTTACAACTTTTGCATACGACATAATTT 2061760 25 100.0 39 ......................... TCCTCTATCATCTCCTTTAAGCACTGTGTAATCTCACTT 2061824 25 100.0 37 ......................... TAATACTGCAGTAACGGTACAAGTCATTGACAGCGCT 2061886 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================ ================== 117 25 100.0 39 GATTAATCCCAAAAGGAATTGAAAG # Left flank : GGTAAGAGCTGATGTATATAATCTTTTTGTATTTATGCATATATGATAAAACTTATTCTTAATTCTCAGATAAACGATTTTCATTATATTGGCGGTTATTAATTGGGAAAACAAACGTGCTTAAAAAGCTGTTTAAAAAGATAATGGTGCCTTAAAATGAAAAATTTATAATTGAAGTCGGAATAGTAGTAAACGATTATTTACGTGATGTAACGGTTTTATGAAAGTAAAGAGATAAAGAGAAAACCGGTTAAGTTCGTTTTCATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATAGGGTGTATTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAAGAGAAAGAAAGATAGGAAGTATAAAAACACAACA # Right flank : GATATGGTATTCAGTAAATTCATGCTATAGTCAATTTCTTAGTAAGTGCGAAGAGAAATAGCTTTTGTCTATACAAAGAATACCAGTTAAATCCCTTAACCCACTTATTTCCAACATTCCCCATTTAATAGCCCTTTTTATTTCTTTGCAATTATTACGAAAAAGACTATATTTGCAAGTGCTCAAATGTTTCACGTCAAGAATCCGCAACTAACCCGTTCCCTAAGAACTAAGTATATTTTACACTTCTTTAAACTAATGGCTTACCATTGTTTGATGATGTGCATATCAAGTTATGATAAATCTTATAATGAGAATTCCAGCAAATTAAAAGAAGGCATTACATGCCTCGCCTCTAACAGACCTGAGTTCGCAACTGTAGGAAGGAATTTTGAGGGAAGTGAGGATATGGAAACAATATGTTTCCTTTTTGGCTACGTTACGATGAGAGTTACTTGAGATAAAAGAGTTATTAGTTTGCATTGTCTATCTATATAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCCAAAAGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: F [matched GATTAATCCCAAAAGGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.30,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2080896-2076433 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033236.1 Saccharolobus solfataricus strain SARC-H chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2080895 25 96.0 40 .........C............... CCATATTATTTGAAGATTGGGGATTTACTTTTTGGGATTG 2080830 25 96.0 38 .........C............... TAATATTCTTCCACTGAATCATCTTTAAACAAAAAATT 2080767 25 96.0 37 .........C............... TTTGCTAATGATTCACCTTCAATTTTCACCATATTAT 2080705 25 96.0 38 .........C............... GTACTTATGTGTTGATGCAAACTCTGCGAATAGATCTA 2080642 25 96.0 36 .........C............... ATCTTAGAGAATTCTGGAGTACCTTCATAATGTGGT 2080581 25 96.0 40 .........C............... GGAATGAGTTTAGATAGCTCTTCATCTATTTTCAAATCAT 2080516 25 96.0 36 .........C............... ATGCTAACAATGCTCCGATAATACCTCCAACTCCTG 2080455 25 96.0 40 .........C............... TACATTATTGTTAGTCGGTACAGCATTTATTTGGACAACA 2080390 25 96.0 41 .........C............... TATTATCCATATTTTCATTATACATTGCACTCAGAATTTTT 2080324 25 96.0 38 .........C............... AAGTCTCCCTCAATGAAAAACTGCGCACAAATTGAGTA 2080261 25 96.0 38 .........C............... CATTTCTTCCTCATTTAGTTCGTCTTTTTCCTGTAATT 2080198 25 96.0 38 .........C............... TGTGACACCTAAGAGTACGTACAGCGTTGGGAAGAAGC 2080135 25 96.0 35 .........C............... ATAATTATTCAAGATGCGATATTGTTTCAAATTTT 2080075 25 96.0 34 .........C............... CTCTAAATGGAATTTGAGAATTTAATATTTTATC 2080016 25 96.0 37 .........C............... AAACAACGCAGCAAAAACGAAGAAGATAACGACATAA 2079954 25 96.0 37 .........C............... GCAAGGGGTAGACCCGCGACCTGTGGGGCACGCACCC 2079892 25 96.0 39 .........C............... ATGTGTCCGTTCGGTGCGATGTATATTTGTACGTCTTTT 2079828 25 96.0 36 .........C............... GCGTTTCTCTCAGTGGAACTCAAGGGCAGACAATTA 2079767 25 96.0 39 .........C............... CCCGAATCCATTAGGTGTAGTTGGAACGAAATATATTAT 2079703 25 96.0 43 .........C............... TTAACCAAAATACACGTTTACCCAGATGGCACGCTGGCTAATT 2079635 25 96.0 36 .........C............... TTGATAGTCACAGCACCTGGGTCTCCATGATATAAT 2079574 25 96.0 39 .........C............... GTTCTAGGCCCTCCACTTTTCACGAGAAAATAAATATCA 2079510 25 96.0 40 .........C............... AATAAACTCTTTGCTTTGAACGGCCACTTTGTGGATTTAT 2079445 25 96.0 38 .........C............... ACATAGAAGATGTTAGCCTTTGAAATGGTTTAGCTAAT 2079382 25 100.0 40 ......................... AATGATATTGCATGGTTCAATAACTATAGAGAAACGGCGT 2079317 25 100.0 40 ......................... CTTTGTGTAAGTGATCGCTTGTACTCGCAATCTTAGCTTG 2079252 25 100.0 39 ......................... TTACTTCTGATGGCATCCTCAAATCTCGCAATTAGTGCT 2079188 25 100.0 34 ......................... ATAAATACTTAAAGACAATATACAGACCATTACC 2079129 25 100.0 41 ......................... AGAACCACACTATATCACTAGCCGAACCGGCAATATTAACA 2079063 25 100.0 39 ......................... GAACATTTCCATGATTTTATCACTAAACTCTTCCAAGTT 2078999 25 100.0 36 ......................... AATCCAACTGTAGCTAGCACGATTCTTGCTAATGTG 2078938 25 100.0 36 ......................... AGCTTCAAACATTTTTATAACTTCATCAACTTGAAG 2078877 25 100.0 38 ......................... CACACCAAGGAACTTCAGCCAAAGATATGCCAAGTGGA 2078814 25 100.0 44 ......................... TGATAAATATGAAGTATTTACTTCCGCAATACTTGATAGAATTC 2078745 25 100.0 37 ......................... GGTTTTAAACATCTCAAGAAGTCTGAGCGGTGGTAAA 2078683 25 100.0 36 ......................... ATCTTCTTTAGAGGTGAAACATTAACAAGTACTTCA 2078622 25 100.0 38 ......................... TCTTCGTCGCTATAAGTTTTTACCCATATTCTAATGCC 2078559 25 100.0 40 ......................... CTAATTTTTTCAGTTAGTTCGTCCAACAATTCAGTGACTT 2078494 25 100.0 38 ......................... ATTTTCTTCTGTGCGAGCTTGTTTACGTCGTTCAGCGT 2078431 25 100.0 39 ......................... AAGATGAAGAAACGCTTAAGATCTTCAACTTGCTGAAGG 2078367 25 100.0 41 ......................... GAGACCAATTAGCAGCAGCAGCCGAAAGCAGCGGTTATGCC 2078301 25 100.0 40 ......................... AGTTAAACGAAGCGAGCAAAAGCGGAAAGAGAGGAAGGGA 2078236 25 100.0 40 ......................... TTGGGATGCGCTGCTAAATGTCCAAACGTCCCCGTAACCG 2078171 25 100.0 35 ......................... TTTACCTCGTCAATTGTGTTACCTTTGCAGAATTT 2078111 25 100.0 40 ......................... CTACTTATTCAGGCCACTACTACTACACTACTCACACTAC 2078046 25 100.0 38 ......................... AGTTGCTGTACCCCCTGTAGTTCGCCTCTAAAGATGTG 2077983 25 100.0 37 ......................... GTAACCTTCATTGTCTCACCCTCCTCCCGTTTCCATG 2077921 25 100.0 36 ......................... AGATAAAAACATGACTGTTACTGTATCTGATCACGG 2077860 25 100.0 38 ......................... CCGTTCTCTGTTCTCTATTCTCTATTCTCTGTATATTC 2077797 25 100.0 42 ......................... ATATATCTAATATTGCATCATTCTTATCGCTCATAATCATAT 2077730 25 100.0 40 ......................... AGTATCACCCTTATCGTAAGTACATTATTGCTTGCGGTTT 2077665 25 100.0 37 ......................... TTACATTCAAATGTTCCATCACTGGTGAAGTTTTGTT 2077603 25 100.0 39 ......................... CTTACCGTAATATCAGTGTTAATGATCATGGTCTCACTC 2077539 25 100.0 40 ......................... TTTATTTTCGTTATTACCAAATCACTAATATTTAATATTG 2077474 25 100.0 38 ......................... TGTAATACTTGAAATCTCCTGCAAACTTTTTCCCTCTG 2077411 25 100.0 40 ......................... TCACCATACACCTCTTCTAACACTTCCTCGAATGGATTTG 2077346 25 100.0 37 ......................... ATCCATGCTGAGTTCAACTACGATGAACTGATGCATG 2077284 25 100.0 37 ......................... TTCTCATCGTAAGGCTTGAAATATATTTTAACACTAG 2077222 25 100.0 39 ......................... TATCTTCCCTTATAACGTATGTGGCGTTGGGGATTTTAC 2077158 25 100.0 39 ......................... TTAGAACTTGCTGATATGGGCATGCTTTCTATTACCCTT 2077094 25 100.0 41 ......................... ATATTATCGAAATCAACTACTCCACCAATATTAAACATTTT 2077028 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2076964 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2076900 25 100.0 35 ......................... CGCCTACAACAACAACAACTACCACCACTACCACG 2076840 25 100.0 40 ......................... TGTACGGGTTGGAAGAGACTCTGAATGAGTTTCTATTACT 2076775 25 100.0 38 ......................... ATTCTGTCAAAGTATATTACCAGCTTTATTGAAGAATC 2076712 25 100.0 37 ......................... ATATCTTTTTGGTTATATATTCCAAGTTTCACTTGGT 2076650 25 100.0 39 ......................... TCAACTTATGCGCAATATGACAATGGAGAAAACGTATTT 2076586 25 100.0 41 ......................... TTGACAAATATGATATCATAATAGACGCAAGAGGTGTAGAC 2076520 25 100.0 38 ......................... TTTTGTGTCATCAAAAGTTCATTTAACTCTATCTTCAA 2076457 25 96.0 0 ........................T | ========== ====== ====== ====== ========================= ============================================ ================== 71 25 98.6 38 GATTAATCCTAAAAGGAATTGAAAG # Left flank : CCTTTTATATATAATTTATCCTCATAATTATCTATATACCGTACGTTAATAAAAAGTAATTCTGACGTTAAAAAGATTTTACTTTATCAGCCTTAGTGAAATTAGGAAATATTACGTATTTAAAAGTAAGTTTAAAAAGATAATTATACGTTGCAATGAAAGAAAGATGAAAGGAGAGCGATAAGAGATAAAAAATATTTTTCGATATGATACGAAATCAGTGAAACATTATTATCAAATAGAGAACTTCAAACTTCGTTTTTATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATACCCAATGTTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAGGAGAAAAGAAAAATAGGAAGTATAAAAACACAACA # Right flank : TACGCAATAGAGTCTAAGTAAAATAATCCTCATTAGAGTGAGAAAATAGCGTTTCATTAACCATTAAGTGATTTTACTTCTACCTCTCCAAAGCCAATGTTCCTACTCTTTCCCACGCCGAAGTAATTTACGTAATCCAATAGCCTCCTAATGTTCTCCCTTATCTTACTGCCTTTTCTAGCACTCAACTCAAACACAACCCATCCCACAAACCCCTTATTGGGTATGTTTCCGTAATAAGCAGTCATAGGTCTTATCCTATAGTTCACCTCTCTAAAGTAGTATAACGTCTTACTACCAGTAACTCCAACGATCTTCTTATCCATATATCTATTCCAGTGGGAGGCTATAGAGTAGAAGAGGAGTGGAACGTAAGGGAATAACACGTATCTGTTCTCTTTTCTTTTCATCCTAGGCCTAGGGGGTTGTAAAAGCGTAGGCGTCTTGAAGTGAACTCTGTAAAATCTGGCGTCCTCTGCCATGACGTTTTCCTTTACTGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCTAAAAGGAATTGAAAG # Alternate repeat : GATTAATCCCAAAAGGAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: R [matched GATTAATCCCAAAAGGAATTGAAAG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 2092271-2100245 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033236.1 Saccharolobus solfataricus strain SARC-H chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2092271 24 100.0 38 ........................ TTTGTAAAACGTATAAGTCCCGTTAATGAGAAGACGGC 2092333 24 100.0 40 ........................ CAACGCCAACTCCGCCAATTTCCGCATTGATGTTCGCTGG 2092397 24 100.0 42 ........................ TCTTCAAACTTCCCACGGCACAACGGAGGCATGCAAATTATT 2092463 24 100.0 40 ........................ GTAGTAAGCTTTCCTTCTTTATCCTCTAGACCGCTGTAGT 2092527 24 100.0 38 ........................ AGCAATGTACGAACCACCACCTGCTCCAGTACTGTTCA 2092589 24 100.0 39 ........................ GAACTGTCGTGGTGTTCATGAAATATGGGTATGCATATT 2092652 24 100.0 39 ........................ GCAAAGAGTCCATTCAATAACACATATTTTGCACATAAG 2092715 24 100.0 39 ........................ AACATCCTGATCTATACTACCCCTAATCTTTCTGTAGCT 2092778 24 100.0 39 ........................ ATCTGGATGAGCTGTTGATCGGAGACATTAGTTAGGTCT 2092841 24 100.0 40 ........................ CAGTCTGACTCTGAGTTGGCGAATTATTATGAGAAGCTAA 2092905 24 100.0 39 ........................ CTATCCCCAAATCATTCTGCCTAATGCGTCAGGAGGGAG 2092968 24 100.0 39 ........................ ACCACGAGCACGACCTCAAATATAACACCGCCAAAAATC 2093031 24 100.0 40 ........................ TATCTTCCAGATGTCTCAGAAACGCCTTAAAATTATTGAT 2093095 24 100.0 38 ........................ TACATTAGACCCTAGTTGGTTTATCGCTGGTAACGTCG 2093157 24 100.0 40 ........................ ACACTTAGCGACATAAAAACCGCACTGACTTACAATTACC 2093221 24 100.0 40 ........................ CGACATACATATATATGCATTTCCGTGGGAGTGTTACAAA 2093285 24 100.0 37 ........................ ACATATGGTTGGTCTCCAACATTTGGTGAGTATATCT 2093346 24 100.0 38 ........................ GCTTCTACCACGATCGTATAGTATTTCTTCCCTATCTT 2093408 24 100.0 39 ........................ ACTTAAGACATTAAACGTTGCCCTAGGTGAACTAGGCAA 2093471 24 100.0 38 ........................ AAACAAACGAGGTTAATTATTCTTAACTGTATCGTGAA 2093533 24 100.0 38 ........................ CCTGGGACAAGTTCTGTTGTAGCTGAGGAGAAACGTAT 2093595 24 100.0 41 ........................ TCTGATAGCACCAGACAAGTAAAAGCGTATATCCTAGTCAA 2093660 24 100.0 39 ........................ AACATATTCTGGTACGGGTTCGCCATCTGGTACACCATT 2093723 24 100.0 39 ........................ TTTCTGTATTTTCTCGCCCTTCTAGCTAAATTTTCTAAA 2093786 24 100.0 37 ........................ AGACGCTGATGATAAGCTGTCTAAGAAGGTTTCAAGG 2093847 24 100.0 38 ........................ CATCCATTTCCGGTACACGATCCCACGTTTGTGTAGTC 2093909 24 100.0 40 ........................ ACATCGCAAGCGATCTATTGTTCAGTCTATTCCTGGCGGC 2093973 24 100.0 38 ........................ AACTCCTTTGCAATCCTATATCTAGTGTAGCCGTCTAA 2094035 24 100.0 37 ........................ CTGCTCCATCAAACGGCCCCGTGAGGGATACTATGAA 2094096 24 100.0 40 ........................ AATTTGAACATAATTCGGCCTCGTCAGTTTTCCACAGATA 2094160 24 100.0 39 ........................ TCCCTAACTTAGGTTGGGGTAAAGAAATAGAACATAGAT 2094223 24 100.0 38 ........................ TTTACTGACAACGCCATCATACTTACTAGCCCAACTAA 2094285 24 100.0 40 ........................ GTCCATTCTCCATTTATCTCAACCTTATCACAAATTTGGA 2094349 24 100.0 41 ........................ TCAGTTCTAGAAAGAATTATTAGCATTAGATCTTCTAGACT 2094414 24 100.0 37 ........................ CTCTCTATCCCAGATGGAATTCCAAAGGATCAAGCAG 2094475 24 100.0 39 ........................ ATCTGAATTTCCTCAGCTTCCATTGCATAATTTATTCTA 2094538 24 100.0 40 ........................ TATTTACCTTAATATTATGTATAATAGATAAGAGCTCCCT 2094602 24 100.0 38 ........................ ACTATGGACCTACTACAGGGCCTATCTGACTTTCTGTC 2094664 24 100.0 38 ........................ TTATTGTCAGAAAAAGAAATTATACTCCGATTAATAGC 2094726 24 100.0 40 ........................ GTCAAAATTGCCCAACCGAACGTTAGCAAAAATGCAGCAC 2094790 24 100.0 41 ........................ TCCCTTTCAGATTTGCAATATGTTAGAGCGAGCTTCGCAAA 2094855 24 100.0 39 ........................ GCTGAATTGTAAAATTACGTTTATTACTTTCAGTCAACC 2094918 24 100.0 39 ........................ GTTTTATTTATAAACGGCGGGTCTAGATAAAATACAGTT 2094981 24 100.0 40 ........................ TCACTCTTTCAGTCATCATTCTCTTTGCTGAGATTGCTCT 2095045 24 100.0 35 ........................ GCGAAAACAATAGCAGGCGAAATAGAAGATAAAAT 2095104 24 100.0 39 ........................ GCAATAGACAATATAAGGAAGAGCTTACCACCTAGAGGC 2095167 24 100.0 36 ........................ CCTAGAGGCGTAGCGGGCTCACAAGAAAACATTAAT 2095227 24 100.0 38 ........................ AATGCCTGAAGCAATAACGCCCAAGTTACATGCTCTTG 2095289 24 100.0 38 ........................ ATCCCGCTACGGCAATCCCTACGAATAGATCGGCATTA 2095351 24 100.0 38 ........................ GTGTATAAGCACATTAGTAGGATTAGGCACGGTACAAG 2095413 24 100.0 41 ........................ AATCACGAAAGCGATACTAAGGGCAATACAATACAAACATG 2095478 24 100.0 39 ........................ CTTATTTTGGTGTCAATAATCTGTATGTTGCCGTATTGC 2095541 24 100.0 40 ........................ AGATTGTTTTATTAATACCAAGTAGACAATTATATATTTT 2095605 24 100.0 39 ........................ CCAAAACATGTCACATGTGCCGATATTGATATTTACAAA 2095668 24 100.0 38 ........................ AAATCTACCGATCAACGGACGAGGGGGAACGCTAAGAA 2095730 24 100.0 44 ........................ GGGAGTTCCCATTCGATTTTGGGAACCCTCAAGCACAGTCTGTG 2095798 24 100.0 41 ........................ TTGTGCGCCTAGAGTTGCTACGCCTTGTTTCCACACCTCAT 2095863 24 100.0 38 ........................ CTAACTTGTTAAAGTTCTGTTGTAGCTCGTTAAGTTGT 2095925 24 100.0 36 ........................ GTTCCAGCTAAGATGTTCTTTCCTGCAGTCTTTGTT 2095985 24 100.0 39 ........................ AACTAAGCCTTCACTAGGTGAGATAAAGAGCATAGCTAT 2096048 24 100.0 38 ........................ ATCCGTTCTCCGTCCCGATCCGTACCGTTCTCTGTACT 2096110 24 100.0 37 ........................ AGCATAACTTCATCTTCTTCTACAACTTCGACAGCTT 2096171 24 100.0 42 ........................ TTAATTTATTGTCATCAAATCTATTTAGATACGCTAGTATTA 2096237 24 100.0 39 ........................ ATATTTCTTCGAATGGGTTTTCTGTATCACCTTCTTCAT 2096300 24 100.0 40 ........................ CATTTGTTATCAACTGTCCGGGTCCAGCGCTAGATGCGGT 2096364 24 100.0 37 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATA 2096425 24 100.0 38 ........................ ACGTAGCCTAGACTTGCTATAACTCCGTTGTATTGCCC 2096487 24 100.0 39 ........................ ATACCAACAGCAACAACAAACTTATTCTTCGCTCATACA 2096550 24 100.0 40 ........................ ACGAACACACCCCTTAAAACTCTTTTTCCAACATTCACCT 2096614 24 100.0 40 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATAGAG 2096678 24 100.0 39 ........................ TCTTAGCGAACTTGCAAAATATTCCGACCAAAGCTAATA 2096741 24 100.0 40 ........................ TCAGGTGAGGAAGATGGTCTCCAAAACTACTGTTATTGGT 2096805 24 100.0 43 ........................ GAGAGCTACAAACACGCTACCTAATAAAATTTCCAGATTGTAG 2096872 24 100.0 37 ........................ ATACAGATTTCGTTATCCATATCCTACATGACTTTCC 2096933 24 100.0 39 ........................ ATACATCGATCTTGTAATTAGATATCCATTGACTGTTAT 2096996 24 100.0 40 ........................ ATGGAATAGGCTCTCAACAGCAGTATAATTGGCAAGTATT 2097060 24 100.0 40 ........................ TCTACTCTTATAATTCCGTTACTTATCTTAACAGAGAACG 2097124 24 100.0 38 ........................ CGTTTCTATTGCAAGGTCTGAGATTTTTGGCCTGAGTA 2097186 24 100.0 40 ........................ GTATTGAAACGCTTAAGGTCAGCTCTAATTCTGTACGGAT 2097250 24 100.0 44 ........................ ATGTTACTAAGTAAGTTTAATAATATATTATAAAATGCCATATA 2097318 24 100.0 38 ........................ CTAAGCAGTGACTCACAGTTTAGACATTCACAAGTATC 2097380 24 100.0 41 ........................ TTCTAAGCGTGTAAAGATCTATCTGACAACACGAAACTATG 2097445 24 100.0 40 ........................ TTGAATATTGTACAAAGGAACGTTTAACCCTATAATAGAC 2097509 24 100.0 37 ........................ CAATCCCATTCGTTTTACTCACTTCTAAGAACCTCGC 2097570 24 100.0 40 ........................ AGTCTCTGCATCATGATCCCTGCCCCAGCTAAGACGTTCT 2097634 24 100.0 40 ........................ ACGATTTTCGGTGTGAATAATGTAAATTTGCAAGTATCTG 2097698 24 100.0 39 ........................ GTCTTTATGGCCCTCTGGGTCTTTCCACCATTGAGAGGA 2097761 24 100.0 40 ........................ TTATCCTCATTCTATCGGTGAGTGGAACAAATTGGGTAGC 2097825 24 100.0 40 ........................ ATCGTTATGCTGTAAACTTCCCCGGTTCTCAATCCCGTTT 2097889 24 100.0 40 ........................ AGTTAACAATACTTTATTGTCAAAGAAGCAAGGATATGCG 2097953 24 100.0 41 ........................ TTCAAACTAGATCTAGAAGATTTCTATCGGCATCTTTACAT 2098018 24 100.0 40 ........................ ACGATATGAAAGTTGCCAGAGCCTTAAACAGAATTGGTTC 2098082 24 100.0 39 ........................ GCTTCTTGTCCCTGAACTCCTTCTTGAAATGGATTTATT 2098145 24 100.0 37 ........................ TTTCGTATAAGGACCAGAACGGCAATACCCAAACTGT 2098206 24 100.0 37 ........................ CTACTACATCATCCTCTACCACGCCAAGCCAACAACC 2098267 24 100.0 38 ........................ ATCTAGCGTTGTCTCTGCCGTTATATATTTGAAAGTGT 2098329 24 100.0 41 ........................ ATCGCTGATCCAGAACCACGTGGCGAATACAGGAAGAACTA 2098394 24 100.0 39 ........................ ATCAAAAGTCCGCTATGGTCTAACGGTGTAAATAATTCT 2098457 24 100.0 37 ........................ AATTGGATCCCTACGGTTGACGGATCACCGAAAGTGT 2098518 24 100.0 39 ........................ ATCATATTTTGAATTCTCTTATACAGAAATCTTTGATAT 2098581 24 100.0 41 ........................ ATAGCTATATATGGAAATGTTCCAGACGCGGAATATGTTGC 2098646 24 100.0 39 ........................ AAGCCTACACAGGATAGGATACTCAAATTATATGAAAAT 2098709 24 100.0 42 ........................ TTTGCGCATTTACTTTTGTATGAGCTAGGCTATTTACATCAT 2098775 24 100.0 37 ........................ CTGAAATATCCTTCAAATTGATTTGCCAATAAATTAA 2098836 24 100.0 37 ........................ TGTTCTGTCGTTACTGTCGTAAAGCACGTCCTATTAT 2098897 24 100.0 38 ........................ ACAGTGCAGAAGTCTAATCCAAATTATTCTACTTTAGC 2098959 24 100.0 39 ........................ TCCTTGGAGATGTTGATGTTTTATACGGTATTATGTGAA 2099022 24 100.0 38 ........................ GCACAATTCGCCAACGATTTCGGTTCGCTTTATACCTT 2099084 24 100.0 41 ........................ CAAATTTCGGCGAAAATTGTACCGAATTTCGGCATTGCTGG 2099149 24 100.0 40 ........................ AAGATCATGGTATTGATATTCAAAAACATTATTCAGAGTG 2099213 24 100.0 42 ........................ ATTAGAAAAGTTTAAGATTACGCATGCAAATATGTTTTTGAT 2099279 24 100.0 39 ........................ TTCTGTTTCGAAGAAAACCCGCCTCAGATTCATTATGGG 2099342 24 100.0 39 ........................ AAATCAAACGGAAACTCCCCGGATATTATCATGTCTAAA 2099405 24 100.0 37 ........................ CCTCATCGTAAACATGCAATCTTGCATATTCAGTGTA 2099466 24 100.0 39 ........................ GCGATATATGTTATAAGAGGAGAAGGGACTTTACCCCCT 2099529 24 100.0 41 ........................ ATATACATCGCCGGTTTTATAGCAACTGCACAGCAACAAAT 2099594 24 100.0 38 ........................ GAAGTTGCAAAAATTGCCAATGTTTTTTTCAAACGCGT 2099656 24 100.0 39 ........................ ATTTATGATGAAAATAGGAAATTTTTCAGAAGAATTATA 2099719 24 100.0 37 ........................ AAAAGTTTAAATACCCGAAGCCACAAAGGTAAAAATA 2099780 24 100.0 40 ........................ CGTTCTAGAGCTAAACGATGCATACGCGGTGGTACAACTA 2099844 24 100.0 41 ........................ ATTCGGGGAAAACTTATGCATTATAAGAAGAAGAGATATTT 2099909 24 100.0 40 ........................ TCAAATAAGGAACAACTCTGGGTAAGCCCACAATACGCAA 2099973 24 100.0 38 ........................ CTTAGCGTCTCAACCTGAACCAAACTTCCTAGATCAAC 2100035 24 100.0 38 ........................ TAAACTAGATCCTTATATTTCACGTAAATGTAAAGGGG 2100097 24 100.0 38 ........................ TAAGGAGTAAGCTAGCACTAGCAATAGCGGTTGCAATA 2100159 24 100.0 39 ........................ GTTCATCAGTTCTACCTTTTGGTCCAAAGGCTGATCCAA 2100222 24 95.8 0 ..G..................... | ========== ====== ====== ====== ======================== ============================================ ================== 127 24 100.0 39 GATAATCTCTTATAGAATTGAAAG # Left flank : GCTTTATCGGAGGCATATAATAGTTCCACCCCCGAAGCTCCTCCTCAATAGGGTCTGAGGCCCTATATGAGTGGAGTCTTCGTAGCTGTCTAACTATCTGCGACCTCACAATATAATAGCAGTTGAAAAATCTAAAAACCGTTTTAAGGAGGGGGGTAAAAGAATTCCCGAATTTACTAGGGATTAACCTAGAATTAAGAAGATCATCTCTATATAAAGATTAATAATTAAACTAGGGAAAAAACTTACTTCATCGTTAAGAGAATAGTCTAGTAATTTTGTATTTTTTGTCCCGTTTTTGTAAGTGGGGGTCGTTTGATGTTAGTTTCTTAGGAGGTAGGGCGTTATCCTCAAATCATTACCTCCATGAAGAATACCTTATCCTCCCGGGCTTAGTAGGGATTGAAAAAACTATAAAAAAATTGAAAACACAAACCAGAGAAAAGCTTATAAATAACTAAGGAGAAAATAAGAAATAGTAAGAGATTAATAAACCCTCA # Right flank : GATCTTGATGATATTCAATGAAGTCCATTAGTACTTCCCCCCAAGGAGGTTGGAGAGAGGGAGAAAAAGAGTCGTTTGAGAGGTTGATAAATAGGATTATGAGGTTGGGAAGGGTTAGAGGGATGAGAGTGATTTTTGCAACGTATAAACCCCAAGATTTAAATGATTTAATGTTAACGTTAACTAACTTAAAGATTGCATTGAGGGTTAAAGAAGACGCTTTAGATAGGATTAACATGAAGGAATAAGCTAAGTTGTTGCAAGCTTCACCACCAGGGTATGGAGCGTTGAGGACTTTCTCGTTAAAGGTGAGAGATCTGATATTCAGAAATGAGAAGTATCAAGATTCATGAAGATTAGATAGATCTTAGTAGTGTTTAGAAGGTAGTATTATTTCTAGTTAAAGTGCCAAGCACTGCCTTAGGTGTAAAATCCCTTCCATCATAGGTCCACACGCTATTTAAACTGTAAGCGTATTCTAAAAACCTCCTTAACAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTCTTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], // Array 4 2499490-2499902 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033236.1 Saccharolobus solfataricus strain SARC-H chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2499490 24 100.0 39 ........................ ATACTGCAAGCGAATTGGCGGAAAATTGGCAGCGACGTG 2499553 24 100.0 42 ........................ TTATCTAATTTTAATAATCAAGGAAATTCATTAACTCAAATA 2499619 24 100.0 39 ........................ CCCATTCATCTCTTTCTTTGCAGCTTTGTTCTAGCATTA 2499682 24 100.0 41 ........................ TGGTAAATAGCTCTGTTAGGCCCAGTTATTCCATATTCTGA 2499747 24 100.0 44 ........................ ATTTTCTAATATATCTAATTCACTCTGCGTATCATTATGGATAA 2499815 24 100.0 40 ........................ CCCGCCCAGCCAGACTGTTTTCAGCCCAAACCGGCTAATT 2499879 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================================ ================== 7 24 100.0 41 GATAATCTACTATAGAATTGAAAG # Left flank : TCCATCATATGTATACATATTTAATAAAAAATTAAAGAAAAATTATAATATTCCACACTTTTTATAATGAATTCCACGTTAGACTGAAAATTGCTATAATTTATTAAGATTAAATTAATAAAATTATTATTTATATTGAAAATTCATATAAGATATTTTATATTTACTAAAAGATTTTTATCATTTGTATTTTCTTATGCTAAAACTATCCCTTTAAAATCCAGTAAAAATACGATTATTAAGAATAGACGAAAATCTTGTAAATGATTACATTTCTCTTAAAGAAAATATAGGGAAAGAGTTCCCCCGTATACAATCGTTGTTTTCCTTATTCGCTAATTCGTTTTGGGCTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCGTTAAAATCCCGGGAAAACCCGGGAATAGTAAAAAAGAGAACAAAAATAATAATAATACTAATGAAAGAAGGGAGAAGAAAAGATAAAATAGAGGGTTTAAAATCCTAA # Right flank : GAAATTTATCAAGTCGAAGATTGCACTAGAGTCAAAAGGTATCATTTCTTTCTTTCCTTCATTTCTTTAACTCTCCGACTACTTCATCAGTATTGATTTTTACTATCTCTTTAGATGCTAAATCCAATAATCTTCTTGCTTGCTCTTCTTCCTTCTTTCTAACTTCTTCTTCCAAATCCTTTCTTAAAACCTCACTTACATTAATCTTATATTCTTTTGCTTTTTCTAACATTTCTCTCCTAACCTTTGTCGAGGCAGCAACCCGTTCGCCTATAATGACCTTCTTGAATTATAAGGTAATAAATATTCTGTAGTAGAATGTTTTCTACCTTATGCTTTCTAGGCTTAAAATTTAAATTCTTTAGGATGATAGATATTAATTGTGGAATGATTTCGAGGCTTAGACTAACCATAAAAGAAACCTCATAATCTTTGTACATAACGTTTGTTAAACTGTATTTAGCCTTTACATTTCTAGGTTTTTCTGCATGAGTATCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], //