Array 1 8772-9748 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFIG01000037.1 Legionella pneumophila subsp. fraseri strain ATCC 35251 contig037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8772 37 100.0 35 ..................................... TTTATATCAGTTAATTATTTACTATATGCATAATA 8844 37 100.0 35 ..................................... CCGCGACTAGTGCCAAGATACGTACCTGTGTTAGA 8916 37 100.0 35 ..................................... GCTTTCAATTCTTTGAGCTTGTGAAATGCTTATTT 8988 37 100.0 35 ..................................... GAATTTACCCGTATAAGGCCGAAGAGATAATCAAT 9060 37 100.0 35 ..................................... CGTCTTTTAAGGCTTCTTTGGCATTTTCAACTTGA 9132 37 100.0 35 ..................................... CGTACAACGACAATTAGCGTGTGCGGGTATGTAAG 9204 37 100.0 34 ..................................... TCTTTCGATTTTAAGAGCTTGTCTCTGCTCGCTT 9275 37 100.0 38 ..................................... GTAACAGCCGTAGACTCTTTTGCATTTAGCTGTGTCTG 9350 37 100.0 34 ..................................... CTTTTTGTCGGTGGCCCTGGGTGCGGAAAATCTT 9421 37 100.0 35 ..................................... TCGTAGACTTGCCCTATCTCATGTTTTCCTTTTTC 9493 37 100.0 38 ..................................... TCGTTCGTAAGTGCGAACGTCAATACCCCACTCAAGAC 9568 37 100.0 35 ..................................... TTTGACATTCCCCAGGGTACAGCGTCACATCTTTA 9640 37 100.0 35 ..................................... GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT 9712 37 81.1 0 ....A......C...........TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 98.6 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCTGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACACTGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATAATTGCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //