Array 1 55249-56055 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JGYS01000008.1 Bifidobacterium callitrichos DSM 23973 Contig08, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	====================================	=============================	==================
     55249	    36	 100.0	    28	....................................	ACGAAACTGCTGTTCGCTTCGGACTCGG 	
     55313	    36	 100.0	    28	....................................	CGGTCCGGGTTCCTCATGGTGGGCCGCT 	
     55377	    36	 100.0	    28	....................................	GAAACGAGCGTGGTGTCGTGGCCCGCGT 	
     55441	    36	 100.0	    29	....................................	CTTTCACACAGCAAGCCGGACTCCGCGTC	
     55506	    36	 100.0	    28	....................................	CTCGTGGAGCGGTGGACCTACCGGCAGG 	
     55570	    36	 100.0	    29	....................................	TCAACGCCCACGTGGTCTTATGACCAATA	
     55635	    36	 100.0	    28	....................................	TCGTGCGTCGCCGGGACTTGCACCCGGC 	
     55699	    36	 100.0	    28	....................................	AGGTGGTCGAGTAGGTGGTCGGTGAAGT 	
     55763	    36	 100.0	    28	....................................	CCGACGAGGCGCAAACGTTCGGCGGCAT 	
     55827	    36	 100.0	    29	....................................	GAAGCACTCGGGTACTGTTCGTGACGTTT	
     55892	    36	 100.0	    28	....................................	GAGTCCCGAGGATATTCGCGAGGATACG 	
     55956	    36	 100.0	    28	....................................	GCGTGTTTGTGTGTATCGCGCGTAGGTA 	
     56020	    36	  94.4	     0	......................C.......T.....	|                            	
==========	======	======	======	====================================	=============================	==================
        13	    36	  99.6	    28	CAAGTCTATCAAGAAGGGTGAATGCTAATTCCCAAC	                             	       

# Left flank :   ACTCAACGGGACCGGATTGACGATTCCCAGTTCGCTGAATGACTTCGCACAACAATATGGCTTGTACTGTGAAGGGCGTGTCGACCGACTCGCGGTGCCCGAATATGCGGGCATCGTATGAAAAGGGATGAGGACAGTGGCGGCATGTGGTGTTTGGTGATGTTTGACCTACCGGTCAAAACCAAGCAACAGCGTCGTGCTGCTACAGAATTCAGGAACATGCTGTTGGATATGGGCTACAGCATGGTGCAGTATTCGGTTTACGCCAGATACACTCCCACGCAGGCGGGAAACCGTTCGACGGTTCAGGCGATCAAAGCGGCTTTACCGGCACACGGATATGTGCGCGTGTTGCACATCAGCGATCACCAGTGGTCTTCGGCACTACGATTCTCCAACTCCGAACAGGACCTGGAAGAGGAGACTCCGCAGCTGTTCACGCTTTTCTGAATGAAGAAAGTGCTACAAACCGCAGAAAATGGCCCTTCTTGAGAGGCTAT
# Right flank :  CCCGTATCCTGCGTGAATTCATTGCTGAATTGACTGTCTCTTAGACCCGTTTCGTGGCCGGCTGTATTGCGATTATGGACGCGCTGCGTGCGCGTCATGCCGGCCCGCCTGTCGGCTTGCACGTTGCCTACAAGCAGCTCCGCCGCTTGCTTCACGGCAACGCCCCGACAAGAGGAACCCTGACAAGAGGAGTCAGGATGAGACCAACGAATTTTCCGGCGCGAGATGTTAGACGCTCGGCCGCGCCATCATGAACCGACTCAATTGCGCCGCTCTCCCGCACCACTTCAGCCATGCCGCCCGGTTGCGCCCCTGTCTGTGCCCCCGGCGGTGCCGCTCAACGCAATTTTCGTCGATTTTGGCGTTGAGCGGCACGACGATACGTCGTTACTGCCTCGCCGTCGTTTTGACATGTTGTCAAAACGGCTATTTTCCAACGATTCTGCAATAGCCAGTATTCCAAAAACTGCCTCTGCCGCCGCCTTGTCTGCCGTTCAACG

# Questionable array : NO	 Score: 3.24
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAAGTCTATCAAGAAGGGTGAATGCTAATTCCCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.10,-0.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//