Array 1 44-2653 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWG01000021.1 Vibrio sp. V29_P1S30P107 scaffold320_size2869, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 44 28 100.0 32 ............................ CTTTGTCCCATTCTTTGACCGTTCTCACACTT 104 28 100.0 32 ............................ TTTTTTTAATTACATGCTGGTTATATATTTAT 164 28 100.0 32 ............................ GGTTCCGGCTGTGTCGTTGGTTTTGAGTTTTT 224 28 100.0 33 ............................ CCGTATTACTACACGGGGATGCATTGCTATGCA 285 28 100.0 32 ............................ TTTGTGGGCGGTGCCGATTGATGAAAGCGCCG 345 28 100.0 32 ............................ TCACGGGCCAAGGCATTGGCCACGGTGTCCTT 405 28 100.0 32 ............................ GTATAGTAATACGGGGTGAAAGTCCCCACCCC 465 28 100.0 32 ............................ GACTAGATAAATTAACGGCATCGTGAGAATCC 525 28 100.0 32 ............................ AGTAATGCTAGTTGCTCATTTTTACGAATTAC 585 28 100.0 32 ............................ TAAGTCATGAGCAATTTGTTTGTATTGAACAT 645 28 100.0 32 ............................ CATCATCATCAGTACGTGTAGTATGACCAGTG 705 28 100.0 32 ............................ TCGCTAAAAGCAGAGCATCAACAATAGTATTT 765 28 100.0 32 ............................ AGGCACTGGAAAATCATTGAATGCAATAAAAT 825 28 100.0 32 ............................ GAGACGTCGAAGAACTACCACCGCCCTCAAAC 885 28 100.0 32 ............................ GTGATGCTTAGGAAAGAGAATCGCTTAACAAG 945 28 100.0 32 ............................ GCCGGCACCATTGACGGCTGGGAAAAATTGTC 1005 28 100.0 32 ............................ CGATGGCGGCGATGTTCAGCTCTTTATCGAGC 1065 28 100.0 33 ............................ TTTGGACGTTCTTCTAAATTCTGATTCTTATTT 1126 28 100.0 32 ............................ TAGCAATGGATAAAGCGAAAAGCTACGAAGCG 1186 28 100.0 32 ............................ TCCAAATCAACATGACAATTGTCATAGTAAGC 1246 28 100.0 32 ............................ TTGTTCGGCATCACGCATTAGCGTAGCTAAAC 1306 28 100.0 32 ............................ GCTGTGCTTGTAAATGCCGTAGGGCCGCGAAC 1366 28 100.0 32 ............................ ATAATGGTTAGCCGTTCATTACACGGATAATT 1426 28 100.0 32 ............................ GTGCCGACTCAGGTGGAGCTGTTGGAGTCGGA 1486 28 100.0 32 ............................ GCATCATGCAGCAATGCCGCCCAGCGGTGTTT 1546 28 100.0 32 ............................ CTGCGCGGTGCGTTTGAGCAGGATGGGGAAAC 1606 28 100.0 32 ............................ GCCTGAGTTATGCTCGACCGCTTTGCGATAGC 1666 28 100.0 32 ............................ TTTTGAGCGCATACCGCAAAAAATACCCGCAA 1726 28 100.0 32 ............................ GTGACGGACAATATCTTTGGCAGCATTTTTTT 1786 28 100.0 32 ............................ CCGCCTTTGTTCAGCACATACTTGAGTGATCT 1846 28 100.0 32 ............................ TGTTGCTCCTTGTCTCGCCTGGTTAACAACAA 1906 28 100.0 32 ............................ AATTTTAGGTACTTTATCTAACGCTTTACGTA 1966 28 100.0 32 ............................ ATCGAAGAACCTTCCCATCGCCCACCTTGAAC 2026 28 100.0 32 ............................ TTTTTTATCAGGCACAGCGGCTTTTGGGATTT 2086 28 100.0 32 ............................ TGGTACTGGCTCGCTGCCGTTCGGCGTCAGAC 2146 28 100.0 32 ............................ TATCAGGAATCCCGGTTCCGCCGGGGCGGTGC 2206 28 100.0 32 ............................ AATTGTTAAGCTTAATACGTACAAAATACTCG 2266 28 100.0 32 ............................ TTTTCCACCTTCTGACCGTCCTATTTCGTCTG 2326 28 100.0 32 ............................ TTCACATGCGCGTTCATCGGTATTTGGATCAC 2386 28 100.0 32 ............................ GTATTTTGAACCATCCCAAGAAATAGACCCCA 2446 28 100.0 32 ............................ GTTCCTTGGTGTTGATGCGAGCGATAGGGATA 2506 28 100.0 32 ............................ TTGCAAATAATCAGGTACTTTAATCACTTTTG 2566 28 100.0 32 ............................ TCGATGATCTCTCAAGGTTGGACTGATGAAAC 2626 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 44 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATTG # Right flank : TAACGGTAAGATTTACGGGATACCTTCCAACTGTTCACTGCTGTCACCGATCATGCAAAACTGATCCACTAACGATCATCGAAAACTGATCCACTTGGTATCATCCGTTTATTTTTTATACGGGTGATTTATGTTAACCAAGGAGACATTTGTGGATATTCATGTTCGCTTTGCACAAGGCCAAAGCATTCGTAACATTGCCCGTCAATTAGGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3327-468 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWG01000273.1 Vibrio sp. V29_P1S30P107 scaffold298_size3327, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3326 32 100.0 34 ................................ CAATACCAACTATAAAGCCGTCGAAGTGCTTGTA 3260 32 100.0 33 ................................ ATCTAAGCGTAGGAGCATAGACGATGAATGACC 3195 32 100.0 33 ................................ AGTATCAAGAATCAGCAAATCCAGCGTGATTTT 3130 32 100.0 33 ................................ GCGCTAGGCACGCGCCCAATACCATCGTGCGCC 3065 32 100.0 35 ................................ ATCATCGATTTGATAGACAGTTTCATCCGCTCCAT 2998 32 100.0 33 ................................ TTTGTAACGACGCGCCGCTTGATGAGCGTCATC 2933 32 100.0 35 ................................ ACATGTGCCTAGATCGGCAGGGTGAATAATAAAAT 2866 32 100.0 33 ................................ AAAGAAATGATGCGCTTTTGTTGAAAGGGTTTC 2801 32 100.0 33 ................................ TAGCTCGTTGAAGCTGTAAATTCTGAGGCCACC 2736 32 100.0 34 ................................ TAAAACCAATATAAGGCGTCAGCAAACACCTAAG 2670 32 100.0 34 ................................ CTTTAAACCTAGCCAACCTTTGCCCCTGTTGTAT 2604 32 100.0 33 ................................ CAGCAGTAAGGCTAATAAGGAAATAAGCATGTG 2539 32 100.0 34 ................................ AGCTTGAAAGCCGGAACTCGCTTTGTTGAATCCA 2473 32 100.0 33 ................................ AACAAACTCAAACGCAAGGTGACGCTAAATCAC 2408 32 100.0 34 ................................ AAAACCTTGAGGTTTACTGCTCCGCTTACGATCA 2342 32 100.0 34 ................................ GAATTTGCTGGCCAACATTCACTTTAGGATACAG 2276 32 100.0 34 ................................ TGTTTAAGACGCTGAATTGCAGAAAGTCCATTTA 2210 32 100.0 33 ................................ CCAAGATGCTGGCTGTACAAGCGAGTTCATTTC 2145 32 100.0 34 ................................ TCAAACAACGCAAGAGTCCAAGTTCGTTTAGCAT 2079 32 100.0 33 ................................ TTCAGATCACGCTCAAGATAGTAATCGCACTCA 2014 32 100.0 34 ................................ AATCGTGACCACATAACGCCACTGCTTGTCTGGG 1948 32 100.0 35 ................................ AAACCCCAAGAACCGGTACAAGACTGGTGCAAATT 1881 32 100.0 34 ................................ CCAAATGGTTATAAACAAGGGTATTAAAGTCAAC 1815 32 100.0 34 ................................ CTGTTATTTTCTCTTGGTTCACTTTAAAAAAAGG 1749 32 100.0 33 ................................ GCTTGCAGTTGTTCAACTTTTTCAGAAAGCGGC 1684 32 100.0 35 ................................ TAGAGAGTCGTAACAAGCCAAGGCTTGCACGATAA 1617 32 100.0 34 ................................ AAATTATATATTAGGAGGCCCATAATGGGTTGTA 1551 32 100.0 34 ................................ TGCAGGTTCTATTTTGGTATAGACGTGGAATTCA 1485 32 100.0 34 ................................ AAGGCCAAGTTTGCGCGCCGCGTTTTCAACGCGT 1419 32 100.0 33 ................................ CTTTGACTAGGTTGGTTAGTAGCCCTTCGGTAG 1354 32 100.0 33 ................................ TCTAGCGCTTCGCCACTGAAATAGTACGTTGCG 1289 32 100.0 34 ................................ ACTTGCTCGCCATTCGATGTCCACACCTGGAATC 1223 32 100.0 34 ................................ TAATAATGCCGTTGAATTGCTTGAAATAAAACTC 1157 32 100.0 34 ................................ TCGACTATTAAGTTGATTATAAAAGAGATAATTA 1091 32 100.0 33 ................................ TTGCAGCAATTTACCCGTTTCTGCCTGAGCTTT 1026 32 100.0 33 ................................ ACAGGATCGAGCGGCAGTATCAGAGTTAGCGCA 961 32 100.0 33 ................................ CATCTGGCTCTCCGGAGCAGGGATTGCGTGTGA 896 32 100.0 36 ................................ ACGCTCTCTAGCTCGCTCTAAACGCCAGCCCAGTAA 828 32 100.0 34 ................................ TCGACTTGCAGCTGGCGAATAGTCCAGTAGCCCC 762 32 100.0 34 ................................ TCAACACGAGCACGTTTTGAAGATGAATGGAATC 696 32 100.0 33 ................................ AGCAGAGCCAGGCAACGCGAGAGCAAGAAAGCA 631 32 100.0 34 ................................ ACCCCAACCGCGCTGCTAACCAGCTTTTGCTGCC 565 32 100.0 34 ................................ ATCCTCAGCGACGGTCAGGCCGTCAGTGTGGTGT 499 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 44 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : | # Right flank : CGCGCTTTATTGTCAACTTGCAGATCAACCAAACTGTCAACGATCACCGAAAACTGATCCACTTTTAGCTTAAAAACGATCAATCAAAATTGATCCACCCTTTTACTCAGGTATTGCTCCTGAGCGTCGTTTATCTTTCAATCGATAACTATCACCACTTAACTGCAAAACATGCGAGTGGTGAAGCAGTCGATCTAACATCGCTGCCGTTAATGTCGCATCATCGGCAAATGCGCTAGGCCATTGGCCAAACGATAAATTGCTGGTCAAAATAATACTGCCATACTCATAGCGCTTAGCGATCACATTAAAAAATAGGTTGGCTTCTTCTCGCCCAAACGGCAGGTAACCGATTTCATCAATGATCAATAACCTTGGAGCCATCACAGAGCGAGAGAGGTATTGCTTCAGCTTGTTTTGTCGCTTAGCGGTCGATAATTGCAGCATCAAATCAGCGGCGGTGATAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 180-737 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWG01000317.1 Vibrio sp. V29_P1S30P107 scaffold74_size12911, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 180 32 100.0 33 ................................ TGTAAGTGGACTGGCGATTTAGGAGATAAAATG 245 32 100.0 34 ................................ TGGTGCAAGCGATGGGCAAAAAGCCGTTGATAAG 311 32 96.9 34 ............T................... CTTCAACCCAATGCCTCCTCTATCATTTTGATTG 377 32 100.0 35 ................................ CTCTGCAGAAACATCCCAAGCCACAGACATTTTTG 444 32 100.0 34 ................................ CCCAAACTGATGCAAGACCTTGACGGCGGAGTGA 510 32 100.0 34 ................................ AATTGTCTGTTGTATTAGCCTGCCGTTTTCGTAG 576 32 100.0 33 ................................ AATTGTGGGCTGTGAACTATCCCACTTGAATCC 641 32 100.0 33 ................................ GCATACTCACTGATTTGCCATTTTCCGTTTCTG 706 32 96.9 0 ...............................T | ========== ====== ====== ====== ================================ =================================== ================== 9 32 99.3 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATGCCTAATTGACGGGCAATGTTACGAATGCTTTGGCCTTGTGCAAAGCGAACATGAATATCCACAAATGTCTCCTTGGTTAACATAAATCACCCGTATAAAAAATAAACGGATGATACCAAGTGGATCAGTTTTCGATGATCGTTAGTGGATCAGTTTTGCATGATCGGTGACAAACTG # Right flank : TCCGCTCCGCGGGGGTAACTGGAATAATGGCTCGGGTCGCGCCTCCTACAGGTGTAAGATTTGATCGATGACGTGGCGGTTTTCCTCATGGCAATTTTGTGATGAGCGATTTTTTTGTCAATATAGTCACTTAAATCATGTTTTTATCGACTATATTAGAATTGGTTGTTATCCTGTAACGCTTCACATGGCGGTTAATATCATTAGGTGTGGGGCGATGGGATCACTGTTGGAAGTGAAGCAACTGGGTACGTATAGCCAACAAGGTTGGCAAGCATTAGTTACTGCGTCGTTTGAGGTTGATAAAAATGAATGTATCGCAGTTATTGGGCCGAACGGCAGTGGTAAATCGAGCTTACTTAAGTCGATTACTGGTGAATATTTGGCTGTTCAGGGTGAGTTACGTATTGATGGCCATAAACTGAGCGACTTATCTCTCCAACAAAAATCCAAATTAATTGCTGTAGTCGCACAAAATGATTACGTCGATCCTCGTTTAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //