Array 1 19241-16712 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFSL01000003.1 Klebsiella sp. 02-911 contig_0003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 19240 28 100.0 33 ............................ TCATTAAATCTATCGAGCAGCGCATTGATCTGG 19179 28 100.0 33 ............................ TTAAAAAAGAGATGACGCTAAAATGAGAGATAT 19118 28 100.0 33 ............................ TATTACTGGCAGGAGATCATCCCGTTTGGCATG 19057 28 100.0 33 ............................ TCATCGTGGATTTTTTGGATTTGTATCATTGCG 18996 28 100.0 33 ............................ CCCATCCGCCCTCTTCCGCCAGATGAACAAGAG 18935 28 100.0 33 ............................ TAACGATGGTTTTTTCTTTTTTGATAACGGGAA 18874 28 100.0 33 ............................ CTTATCTTGAGATATCATCTTTAATTTGCCATC 18813 28 100.0 33 ............................ TTTTTAGGTGATGAAAATGACTTTTAAACTTAG 18752 28 100.0 33 ............................ CATGCATGAAGCATGGCGATTTCAAGCAGACTC 18691 28 100.0 33 ............................ TCTTGAAGCGCTGACTTGTGCTTCAGCCTGAGC 18630 28 100.0 33 ............................ TCATCAGTACGGCATCCGCAATCCTGGCATACT 18569 28 100.0 33 ............................ TCGGCTTAACTTTTTTGGCTTTGAGCGTTTTAG 18508 28 100.0 33 ............................ TCAGTGTTTTTTGGTATGACCATTAATAGCTGG 18447 28 100.0 33 ............................ CTTTAAAATTCCTTCCCTGCTCAGGTTACTCAT 18386 28 100.0 33 ............................ TGCAGCAGCAGCTGCTTGCGTAGCCGCATTCTG 18325 28 100.0 33 ............................ TCCGCAAAGAAGACCAGAAGGGATGGCTCAAGT 18264 28 100.0 33 ............................ CGGGGTAATGTATGGCCGCCAAAATGCGAGGTA 18203 28 100.0 33 ............................ TATTTTTACGCCTGTTTTTACCGTTGCGCTTTC 18142 28 100.0 33 ............................ TGGTTTACAATGGATGTTGATCTTGGGGGTAGT 18081 28 100.0 33 ............................ TATTTCAAAAGTTAACTACCGATGTTGCAGTAA 18020 28 100.0 33 ............................ TATCAGATATAGCAGCATCAAGACAGCAATTGA 17959 28 100.0 33 ............................ CATCGGTCAGTGCATCATCAACCTGCGCCTCCA 17898 28 100.0 33 ............................ CGAGCGCGTCAAGATACTGCTCGCAGGCGTAGC 17837 28 100.0 33 ............................ TGGCATCGCGTGGTTATCTTCGGAAAGCTGGCA 17776 28 100.0 33 ............................ TGGTTGTAAATTACTATATTGCACAAGGAGGTG 17715 28 100.0 33 ............................ CGTGGCAAAACTTTATGACATCACAGAATTCCC 17654 28 100.0 33 ............................ TACTTCTTATCCTTCCTGCACCCAGTTGCAAGT 17593 28 100.0 33 ............................ TTCGCTCACCAATGGACTTATCCTCATCGTCAA 17532 28 100.0 33 ............................ CATCAAGGAGACAAAAGCAAAAGCGCTTGATGT 17471 28 100.0 33 ............................ TAAGCAAGCTCGAAGCCGCCGAATAAGCGCCTT 17410 28 100.0 33 ............................ CGCGACGACCTCGTCATCCTCCCCGCTGCGGCT 17349 28 100.0 33 ............................ TACACCCAGCTCTTTGACGCAAAGGCTCAGGAG 17288 28 100.0 33 ............................ TCCTTGGTTCGTTTCTTCTGATGTTTGCAAGGC 17227 28 100.0 33 ............................ TTCCTCTTCTTCCTGACAATCAGCGCAGCGCTG 17166 28 100.0 33 ............................ TGCGGGTGGATGACAATAACGCCTGGCGCGCCG 17105 28 100.0 33 ............................ CCTGTTAAGGATGACGCGGGGAAATGGGTTATC 17044 28 100.0 33 ............................ TCGATGGCGAGCTGCTGGTGAAAAAGTCGATAC 16983 28 100.0 33 ............................ TCCAGGCCAGATCTGTTTGGGTTGGTGTCGAAG 16922 28 100.0 33 ............................ TGAAGGTGAGCGCCAAAAGGAGTGGAAGCATGC 16861 28 100.0 33 ............................ CGGCTGCGTTATCCGGCAGCACGAACTGGACCT 16800 28 100.0 33 ............................ TGACCTTAGAGGCTTCACTCAGTGCCACTTTTT 16739 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 42 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATAAATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCTTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGTTACAAATTGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 28327-27994 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFSL01000003.1 Klebsiella sp. 02-911 contig_0003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28326 28 96.4 33 .............A.............. CGGCTCTTTTTTATCTCCTTCATCCTTCGCTAT 28265 28 100.0 33 ............................ TGATCGGCGTGCCGTTTGTTGGACCCGAAATAG 28204 28 100.0 33 ............................ CGTCATCAGCGCCTTGTTCCAGCGGCGACCACC 28143 28 100.0 33 ............................ CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG 28082 28 92.9 33 ............T.T............. TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 28021 28 89.3 0 ............T......A.......T | ========== ====== ====== ====== ============================ ================================= ================== 6 28 96.4 33 GTCTTCCCCACACGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : CGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGACATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATGT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //