Array 1 954949-955307 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICW01000002.1 Clostridium neonatale strain NEC32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 954949 30 100.0 36 .............................. TTGGAGAACAGCGTTAAATTTAACGCAAGATGAAGT 955015 30 100.0 34 .............................. CCATCCAATTTGATATAGCTCCTGCTAATATTTG 955079 30 100.0 36 .............................. GAGTTTTATTAGTTTAGCCTTAGAAAATGGATATTC 955145 30 100.0 34 .............................. ATATCGAGAATAGAAAAAAATGAAGTGATTCTAT 955209 30 100.0 39 .............................. CAATGAAAAATAAGACGGGAAGAAGTTAATACGTGTTAA 955278 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 100.0 36 ATTTAAATACATCTCATGTTAATCTTAATC # Left flank : TACGCTTTGAATAATATTCAGGTATCTTATACGAATTGTGACACTCAATAACATTTTTAATTAACTCATCTTCACTTGTATCTTCAATGAATTCTCTTATTTTACCCTCTTCAAATAAAATCTCTACCCCAAGCCTAGCATGATCAATTGACTTAGAATCATTAAATGTTCCATATCTTCTTACCTGTTCAAATCTTCCTATATCATGTAACAGTCCAGTAAACCATGCAATATCAATTTCTTCATTTGTCATCTCTAAGCTTGGTGCTATTTTTTCACATAGTTCACTTACACGATATGTATGATCTATTTTTAATTTTATTTTTTCATTGCTGGTATCATACTTCTCAACATAATCATTAAATACTTTTTTAGATTTAATTTTGTCTATATACATCTTGCAGACTCCTTTATTTTTATAAAAAATCCTTTTGTATTATAAAACCATTAGTTTTATATTTTTAATATTTTACATAATAATTAGAAAGCTATTTAATCAT # Right flank : CCTTAGAAAAATAGCCATTCTAAAAATAAAAGAATTCTTCTATCCAAGAAATAACGCTATTCTTCAAAAAATTTACCAAGTGTTTTCTATTTTTTCATTTTTATTATAATGAACTCAGATAAAGTCACTATTGTTGCAGTGTTTTACCTAATTATAAATTAAAATCGCTTGGTAAATACAATGTATACTTTAATAAAACATCAATGATTATTTCACAAGCTTTTATTTTTATGGGCAATGTTTTGCTTCACATGCTTTATATCCTGCTGCTTGTGCTTTTGATCTGCTCATAGCTGTTGAATTTTTCATTCCATGAGCATTTGCTGTATTATGATATATTCCTTTGCTAGATACATAAACTGTATCTGATGCATTCTTTACAACTACACTTGAAACATCATTATTATCAATAGTTGAGGGTGTATTTACACTAGTATTTTGTATTTGAGCTGGAACACTTGTTGTCCATGCACCATTACTATTTAAATAATATCCTTCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAATCTTAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 1559863-1559570 **** Predicted by CRISPRDetect 2.4 *** >NZ_UICW01000001.1 Clostridium neonatale strain NEC32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1559862 30 100.0 35 .............................. TTCTTTGGAATCTATTTTCTCCCTTTTCCATTGTT 1559797 30 100.0 36 .............................. ATATATAATACAATTGCCTATTTAATTTTAGGTACT 1559731 30 100.0 36 .............................. AAATGCTGAAGAAGTCTCTTTATTAAAAGAATATGC 1559665 30 100.0 36 .............................. TGTGTATATCCCTTATCTATTGGATTATTAGTAGTA 1559599 30 70.0 0 ......T.....T..A..TA.A..AA...C | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 94.0 36 GATTAAGATTAACATGAGATGTATTTAAAT # Left flank : TTTAGATCTGATAAATTTATTTGCGCCAAAAATGCCATTGCTTTTCCCTCATTATCCAAAGGATAATCTTCAATACATTCTAAATATGGACATCCTCCCAATTTACTATCCCAAGGTTTAGTCTCTTCAATTTTAAATGTTATTTCATTACTATACCTAGTATTCTCCATGATAATAGCTTCATGCTCTTTTAAAATCTCAGGAATCTCATATTTAATCATCCCATCAACCCTCCAAATGAATATTTATTTCTATGCTAATTATAACATATCTTGTAAATAAAACATTATCCATAATCTAAATAGACCTGCTCATTTCATTAATTATTTACCAGGCCATTTATTTACTTTTCGGTTTAAATTAGAGTGACAAAGCCACTTTAAGCACTTTCCTCTATTGCTTGCATCAATATATAATTTCGTTGGTAAATTTTTAAAGAATATGCTACTATAGTCATATACAGAGAATTGCTGAATTTAAAAATGGCTTATTTGCGTTGG # Right flank : TTTAGTTAAGTCACCCAAAGTTTTTATTCTACTTATATCCAGGTAAATACGTAATATTTTTGCCACTATCCTCAGATATAGTTAATTTAGACAATTACCAAGTAAAAACACCTAAAAACTAAATAAAACAATAATTAGATAAATCTAGTAATTTTACTTGATTGTATTTCTACAGACTCATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATACAAGTATAGCATTTAAGCAACTAAAGAATAATTGCATTTTAAAAAATTTATCATTAACTATAATAANNTTCTTATCCTTTATTGTGTAAATAACTTTTTTATTAAAATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTACACCACATATAATAAATAG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //