Array 1 17928-18429 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PZGM01000035.1 Staphylococcus simulans strain SNUC 1336 contig035, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	============================	======================================	==================
     17928	    28	 100.0	    37	............................	AAGCATATATAGCAGCACGCATTGCAAAAGTTTTACT 	
     17993	    28	 100.0	    38	............................	TGTTCTATGTTATGACAATCAATACATAAAGTTTTACT	
     18059	    28	 100.0	    38	............................	TTTCATGTTTTGGGAATGGACTTTGAAGCAGTTTTACT	
     18125	    28	  96.4	     7	...........................G	ATCACAA                               	Deletion [18160]
     18133	    25	  89.3	    37	---.........................	AATTCTAAAACTGGCTTTATGCTAGAGAACAAAACGG 	
     18206	    28	 100.0	    37	............................	ACGACTTCTGCGACTTTTAAAGCAAGCGCGTTTTACT 	
     18271	    28	 100.0	    38	............................	TACACATGATTAATTCCAAAGTCGAGCCTTGTTTTACT	
     18337	    28	 100.0	    37	............................	TTAGAGAATACCGTCTTTAAGCTGGTCCAGTTTTACT 	
     18402	    28	 100.0	     0	............................	|                                     	
==========	======	======	======	============================	======================================	==================
         9	    28	  98.4	    34	TCATTCTAAAAGATCACAATTCTAAAAC	                                      	       

# Left flank :   AAGATTTTCAGTACCTTTGTTATACTCTAGAATTTCATGTGCGATACGTGTTAAAGTCCGCTGCATGCCTGCATCATCTAATACAATACGTTCTGTCATTCCCGCACTCACCTTTCCATAAAAAAATCCCGTATCTCAATTGAGAGACACGGGACACGAAGAACATGCGAGATTTACTATCTCAACTATTTAAATCAGTAACTGTTTTGTCGGTTACTTTACTAAATTTGTATGGCAATCAGGGTTGGTGAATTGCGTGTTCATACAAAATTACCTCTTAATAAAGTGTTTACTTAGTTACTTTCTCTAGTTTCAACATGTAAATTATCTGCCTTCGGAGCATCTCTGTACTCTCAATTAAAGACTTACGATTTCTTTATTAAACTGTACTAAGTTTAACACAGATAGATGAAAAGTCAAAGGTATTTCCTAAACAAATATAAAGATTTTTCAATTCAAACAAGCATGATAAATAGTTAAGTTATACCCGCTTGTTTAAA
# Right flank :  CCTCAAACAACGAGAAATCAAGACTTTAGAGACCTTTATAATGACAGTAAACTAATATTTGTTCATAAATTGAATGAAGAACTCATCATCTAGATATGGATGTTGACAAAATTCATGATAAGCTATCATTTTGCTTGTCTTATCCAAATCAGTTATTGATTCTTTTTCTTTAAACAACAATAACTCTTCTCTTATTTGTTGAGTATTCATCGGTTCTCCATTCATTTTAATAAGCGCTAATGTATCTGACTCGATAATAAAATAAGGATGGCTCGTAACAATAATACTAAACATATTTAGAGTCTGCAGATATTTTTTAAATGCCTTCATATCCGAAAGCCCTAAATGAGCTTCAGGAAATAACAAAACCAACACATTTTCTTTTTCTGTTGATGTTAATGTGTCTATAAATAATTTGCGTTGCTCTATCACATTTAAATCATCTAAATCATTATGAAAGTCTGGTTTAAACATGCCAAGCAACTTTTTCAAAACAATAT

# Questionable array : NO	 Score: 2.88
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.29, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCATTCTAAAAGATCACAATTCTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0,0   Confidence: NA] 

# Array family : NA
//