Array 1 30755-27615 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSGM01000026.1 Vibrio cholerae strain N2752 NODE_132, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30754 28 100.0 33 ............................ GCTTTATACCAAACGCTGAAAGAGCATGGTAAT 30693 28 100.0 33 ............................ CGAATTGCTCAATCAGCGCCAGCGTTTGGCTGC 30632 28 100.0 33 ............................ TCCATAGAAAAAAACCTAGAGCCTCTAAAGGCA 30571 28 100.0 33 ............................ CGGGTAAAACGCTTGGAAAAACCAAGCCTCTAA 30510 28 100.0 33 ............................ CTACAAACAATATCTGGACAGCATTGCTGTTGA 30449 28 100.0 33 ............................ CACTGAAGCACTTTAACAAGCGCTTAATTTGCT 30388 28 100.0 33 ............................ CAACTGTCGTCACGTTAGCGCGAGAAGGTGTGT 30327 28 100.0 33 ............................ TTCGTTCTCATCGATATTTCCATCCGCATCGGC 30266 28 100.0 33 ............................ TTTAGCCAACTCTTGTTGTGAGGACCCAAGTTT 30205 28 100.0 33 ............................ CGACGATCATTCCGTCACTGTCTTTGCCTATTT 30144 28 100.0 33 ............................ TTACCCACTGGAATTTTTTATAAAGCTCATCTT 30083 28 100.0 33 ............................ CGAGTACAGGATCGCCAGATACTTGAATGCCAA 30022 28 100.0 33 ............................ TCAAAACGTGCTGCCAACCTTGGCGCTTGGCGA 29961 28 100.0 33 ............................ TAGTTGTTGATGTAAGCAGTTACCGCCATCCCA 29900 28 100.0 33 ............................ CAAACCAGAGTTGTTTTTTATTGCCTATACCTT 29839 28 100.0 33 ............................ TGGTTACTCGCTACGTAAAGCGCGATTCACTTC 29778 28 100.0 33 ............................ TCATGTAATGAGAAGTAGGAACGCCATTCGCCT 29717 28 100.0 33 ............................ CTATTTAACGAGTCAAGGTGTTTTTATCGGTTT 29656 28 100.0 33 ............................ TATGACTTAAGAGCGAGTGCGGGCGCAGGTTGT 29595 28 100.0 33 ............................ CTTGTTTGTTAATTTGCTCGGTGTAATACGTGT 29534 28 100.0 33 ............................ CTGTTACACGCCTAAAATTTGGCGCTAGATAGT 29473 28 100.0 33 ............................ TCGCTGAAAAGGACAAAGCAGGCTTTATCAAAA 29412 28 100.0 33 ............................ CAATACTGTTGCTGATGTTTATGATGACGGTCA 29351 28 100.0 33 ............................ CTGCCATTTGGGGTCATCACTGCAGCTTAAGTT 29290 28 100.0 33 ............................ TGGAGAAGATTACACCATCAAAACCGGATGCGG 29229 28 100.0 33 ............................ TGTAGTTGCACCGTCACCAGTTCCCCAATGACC 29168 28 100.0 33 ............................ TACCCGCAGTTTGGTCCAACCCTGTTAGGTGCC 29107 28 100.0 33 ............................ CTGTACGGCGTGGCGCGATTTGCCAAATCAAGC 29046 28 100.0 33 ............................ TATACCCGCAGAGCTTTATGATAGCGGTCCTAT 28985 28 100.0 33 ............................ CCGTTCGGTTAGCCAAGAGGGACATAAGCTCAT 28924 28 100.0 33 ............................ CCAAAACCTCACCAAAACGCACAGGAAGCATTT 28863 28 100.0 33 ............................ TCGCACCTTTCGCGATGCTTATATCAGCATTCA 28802 28 100.0 33 ............................ TTTGGATGAGCAGCACAATCATGCAGAAGATAA 28741 28 100.0 33 ............................ CTACGGGCACACCGCATTCATTCAAGGCTTTGA 28680 28 100.0 33 ............................ TGCCAGTTTGGAACCAATAATCGATCTGTCTGT 28619 28 100.0 33 ............................ CAAATCTTTATCGCCACCTTAGGGGGTAACTCA 28558 28 100.0 33 ............................ TTAGTAAAATGGTGCATAATGGTCGTAAGAACC 28497 28 100.0 33 ............................ TTTATCGAGGTAACCTCGCGGATCCCCGTTGAG 28436 28 100.0 33 ............................ CAAGATGACAGAATACGGACGCGGTATATATCG 28375 28 100.0 33 ............................ CGCGAAAGCGCCGTAGAGTGGGATGTTTGCACG 28314 28 100.0 33 ............................ TATTTCCCACTGGTACTAGTGACCATTATCACC 28253 28 100.0 33 ............................ CACCGGACGGCGCAGCGTGACCGCCTGTTAACG 28192 28 100.0 33 ............................ TCACAGTGAACGAAATCCAAATAACGCAGGTGT 28131 28 100.0 33 ............................ TCCATTTTACGTCTGGAGTTTCTTCCAGCTCCT 28070 28 100.0 33 ............................ CGGGCTAGTGAGACAAAGCAAGAAAAAAGGCAC 28009 28 100.0 33 ............................ TGACCAAAGCGCAAGCGGCAAAGCTGCAAGCGG 27948 28 100.0 33 ............................ TCATTTAGTTGTTCAAAACTTTGCGCTGCAAAA 27887 28 100.0 33 ............................ TCCATTCGGAAAGTATTTCGCTTTGATGTCATC 27826 28 100.0 33 ............................ CGCCCGAAAGGGCTAGCAACCGAAAGGACAGTA 27765 28 100.0 33 ............................ TCGTTATTTTGTTCGCTGTTTGGGTCGATCTCG 27704 28 100.0 33 ............................ CTCTTTAATCGAATTCCATAACGGTGACGTTAA T [27683] 27642 28 71.4 0 .................T..AT.ACAGA | ========== ====== ====== ====== ============================ ================================= ================== 52 28 99.4 33 GTCTTCCCCACGCAGGTGGGGGTGTTTC # Left flank : CTTTACAAAGAACACCTTTGTATTGATTTAGCTTTCTCACTTACACGAGATATGGCAGGTCACTATGACAAACACAAGGTCTCTGATGCGTTTCGAAAACGGGTTATCAGCATGGATCTGTTACAACAAGTCTCCTCGGATATCAATGAGTTGATGGGAGGGGGAAATGCTCGTCGTACTAGCAAATGATTTACCCCCGGCAGTCAGAGGGCGTATGAAGCTATGGTTTGTTGAACCCAGAGCCAATGTGTTTGTTTCTGGCGTAAAAGATTCCGTTGCAGTGACGGTTGTCGACTACTTAATGCAGCATTGCCCAGCAGAATCGGGCTTGATGTTATTTCGCAGTATTCCAGATCCCCCTGGTTATGAGATTCGTTACAAAGGTGAAGTGCGCAAACCCGTGATTCAGCTCTCTGGATTACAGTTGATTGTCGAAACCCTTATTTTGTCAAAATAGCAATATATGGGTTTATTACTGTGCTCTTTAACAATATATTGGT # Right flank : GTTTTATATAGGCTTAATCTTTGAGTTATCAGTGAGCCGGATATGGAAATGACGGATAAGTTAGGAAAGTTATTGCGAATTAAATGTTGAATTTACTGAATAGAGGGGCGATATGATGATTCTACTACAGGGTTATTTGCTTGGGGCTGCGCTGGTGGCGTGCGGCTTGCTGTGGGTGATGGTCAGGCACTTGGATAAGCATGATTGGCAGTGGGACAAAGGCGACATCTGGTTTCATTTTGTGTTTATGGTGTTGTTCTGGCCTTTAATGCTGTTTGGTTGGGTAAAACAGGGCAGGCCTAATTGGGCTGATTGGCTGAAACCTACGGCTAATCGTGCCGATTATTACCGAGAAATGGAACGTGCCTATCGAGAACTGAAAACCTGTGGCGCTTATGTTAGCTATAAACCTAAACCAGAGGGGATTTGTGACAACAGCTACGGTGAGTTTATTTTTCCTAGCGCTTTGCTTGAGAAGCAGTTAATTGAGCGACTGCGTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCAGGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.40,-12.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //