Array 1 50774-51173 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBER010000003.1 Scopulibacillus daqui strain DSM 28236 Ga0454060_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 50774 37 100.0 35 ..................................... TAAAAAATCCCATATTCTTTCGTTCCCCTTTTTTA 50846 37 100.0 36 ..................................... TTGTGCAATGATTAAAGATGCTAAAATATTATAATT 50919 37 100.0 36 ..................................... CAAGGGGCAGCAGGTGCAAATGGTTTTCCTTCTGAA 50992 37 100.0 35 ..................................... TCACATGTTTTATCTGATCCAAGTGATATTTTTAT 51064 37 100.0 36 ..................................... ATCGAAAAAATACTTGCTTAAAACAAACGATAGCTT 51137 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 6 37 100.0 36 GTAACAAAGATAATGACTCATATTTGAGGATTGAAAC # Left flank : ATAGTAAGAAGAATTACTTCATTATATTATGTTCATCATAATGGAGAGAAACAGTCAGAAAACTGGGCTTTACTTTTCGAAACTGCGGAAAATATTAAGTTGATCAAAAGCGCGGTACGCTGGTATGATTGGGAGAGATACTCAAATCGTCAACATCAGCGTATGAAAATGGGGGGGATTGTTGGACAAGCAACTTATGTAGGAGATCTTCAACTATTTATCCCATGGTTGATTCTTGGAGAATATGTGAATTTAGGGAAAAATGCAACATTTGGATTAGGGAAAATAAAAATAATATTAAAACATTAAAAAGAGAGTGGTAATGAGGTATTATTTAAATAGAGGATTGACAATAACAGTAACGGATTTTTTACTTAATTTCGAAGCTTACCCCAAGTTTGCCACAAAAATGAGATCTTCGAAATTAATTCAAATTTTTAAAACCAGTGATATTTAGAAATCCTTATTATTACGGGCAAACTGACACATAATAAAATGCG # Right flank : CAAAAAAACGATTTTTATCAACTTCCGACAGAATACCGCTTATTTTAACCGTAACGAAGCGACAGCAGGTGAAGGTTAAGGAGGGGATAAATGTCGGCTAGGCGACAGCCTAAAGTGACTCTCTCGTAAGAACCTTTTCAGCGGCTTCGCTTTAACATTTACTTTAATAAATACTCATTTAACAAACATCGTTTTAAAAATGAGACACTTGGCAAAAATGAATAATAGATTAGGAGGTGACTTTGAATGATGTTAAAAGAGATTATTGTTGATGACTACGGTATTAGTTTGTCGAAAAAGAGTGAAAGAATGGTTCTAAGGAAAAATGGTAAGGTTATTGCAGAATATGCAATTAAGGAGCTCAATGATTTGGTAATAAGTTCCAAATGTGGAGCGGTTTCGATTTCCTTACTAGAAGAGCTGATCCAAAATGGCACTCAAATTCATTTTGTAGATTACCGTGAGGAACCATTTGTTACGATATATACACCGGCCCACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAAAGATAATGACTCATATTTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 53593-54807 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBER010000003.1 Scopulibacillus daqui strain DSM 28236 Ga0454060_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 53593 37 100.0 37 ..................................... TTCAAAACTTGATTGCTTAGTAGCAAGAACACTAGGC 53667 37 100.0 36 ..................................... CTTGAAAAGACCGTCCATAAATTTGAGCATGACTTT 53740 37 100.0 36 ..................................... ATTGTACATTAATAACATCTTCTAGCATGTGTTCCT 53813 37 100.0 36 ..................................... GAACGTTGTGAAAAATGTGATTACTGTCGGTCTACA 53886 37 100.0 36 ..................................... CATTCTTACCCTTGCCGCAGCTAATGTCATTTTTAG 53959 37 100.0 38 ..................................... TAATGAAAAACAAAAACAGATTAAGAGAAATCGGGATA 54034 37 100.0 36 ..................................... GAACACGGGCACTTATAACAACAGGTGGTTCATATG 54107 37 100.0 36 ..................................... TTTTTATAAAACAGATATAAAAGGGTCATAATCTTG 54180 37 100.0 40 ..................................... ATATCGATTACGCCCGGTCTTGCATCTATTGTTTCAGTAA 54257 37 100.0 39 ..................................... CATTCAACCGTCAAACCACCCGCCACAAAGACACATTCC 54333 37 100.0 36 ..................................... TTCATACTCTTGTTCATTCAAAAAAATGGCGCCTCT 54406 37 100.0 36 ..................................... ATTGCAAACTTAGCATTTTTACCATAACCACGTTTT 54479 37 100.0 37 ..................................... TATTAAATGCACCTAAAATGCTCGGTGATGGTGGCTA 54553 37 100.0 36 ..................................... TCCAGTTTTTAATCTTGAATTCATCAAGTTCAAACG 54626 37 100.0 36 ..................................... TCTTAATTTGGAACGGTATTAAAAGGTTTATGAAAT 54699 37 100.0 36 ..................................... TCGAGAATTTGAAAACGGTGGATATGTCCATGTTAG 54772 36 97.3 0 ........................-............ | ========== ====== ====== ====== ===================================== ======================================== ================== 17 37 99.8 37 GTTACAAAGATCTAGACTCAGATTAGAGGATTGAAAC # Left flank : AAATGACAGGTACGAGAGTAAATAAAGGATTTATTTATAATATCAATGAGGGGAAAGCGTACCCGATAGAAATTACTAAAGAACAAAGAGACTTTGTAAGAAAAATGATATCCATGATTAAAAAAATAGTTTATGAAGAGTATTTTCCCGAACCGCGATCACGAAAACGATGTTTCGATTGTGAATTTAGAAGGTACTGTAATGATTTGGATATAGAAAGTGATAATAAGGTAAGGAAACAAAATTTTAAAAAAGTGCAAGAACTTTTTAACTTAAAAAAGCCCGCTCCCTGAAAAAGTTATGAAGAAAGGGCTAAAAATATTAATAACTTTTAAAAATATCATAATCAAATGTGTTATATTATGGGTATAGATAATATTCGAAGCAGACCCTTATTTTTGCACAAAAAATGAATCTTCGATTAATTAATCGGTTTTTTAAAATCTTTGTATTAGATAAACCTAAACTGCTAAAGAGTTCTTTGCTCTGTATAAATTGCG # Right flank : CAGCAACGAAAAAACAAAAGTCGCGTTTGGGCAGACCTGTCGAACTTAATGATGCGGCAATGATTTACTTCTTAGTGGCAAGGATTACCTAACGAATTCCATTTATTAAAGACTTAGTCAAGCGATTAAAAAACGACATTTATTAAAGGGTATTCATGAACGTGTTCCACTTACCACTTTGCGCTATGAAGTAATGGATGCCGGGTTCGAATTCTGCAGGTCTGTTTTTCTTTTAACAATAGAATTATGAAATTGATTCAAATAAAAAGAATCAAGATCGCATTTGTTTAAATGTCATCTTGGTTCTTTTTCATTGCAAATACTTTGTCATGTTTCTTAAAAACATTCGGCATGTTATCGGGCATGAGACGCATTTTGTCCAATGTGAACCTCTCTTGGCAGCCGTTTGGAAACGCTGGGGATTTTTCGCGGTACAGTCTTTGTCATTTCGGAGGAGTATATGGTGACGATCATACTGCCTCGATGTGCTTTGGCCTTTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAAAGATCTAGACTCAGATTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.30,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //