Array 1 57784-59331 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNK010000004.1 Clostridium tyrobutyricum strain 1001713B170207_170306_A1 NODE_4_length_208140_cov_39.8358, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 57784 30 100.0 38 .............................. TGCATATGATCTTGCTTGATAGTTATCCATTTTGGAAA 57852 30 100.0 36 .............................. ATGGTCATTTCGTTTGTACATTGATATTACTATTTA 57918 30 100.0 36 .............................. ACTTGTCACCTGTAGCAGCATCAATAAGATTCAAGG 57984 30 100.0 37 .............................. ATAATTTGCATATTTTAAAAGATAATGTTTACACCAG 58051 30 100.0 36 .............................. TATAAAATTATTAAAATTCCAATTTGAAGTTTTGAC 58117 30 100.0 35 .............................. CAAGATATTGGATTTGTTAAAGGCAGGTTTTACAT 58182 30 100.0 35 .............................. TATCTTTAAATTGCAATGGACAATTGGTTCGTCCT 58247 30 100.0 36 .............................. CATATTTTAAGAGCATGTCCAATTCTTTCTATCGTA 58313 30 100.0 36 .............................. TTAGGCTTATAGGCTGTCTAGGTCTAGCCATGTCAA 58379 30 100.0 37 .............................. AAAAATGTTATGAACAAGGGTATGCTTTTTACTTTGG 58446 30 100.0 35 .............................. CTGCTTATTAAGTCAATACGGAAAGAGCATTCCAA 58511 30 100.0 36 .............................. TAAAATACCAGGTCAACTGGATATGTTTTAGGAGGA 58577 30 100.0 36 .............................. TGGATTGAGTTTGGAAAATCAATTGCATCAAGTCAG 58643 30 100.0 36 .............................. GATAGACAAAATACCACTAAAAGGGGGTGGAAATGG 58709 30 100.0 36 .............................. GCAAAATAAATGGATAAGTATTAAAGATAGATTACC 58775 30 100.0 36 .............................. AGGGTATTTCGCCACCCCCTTATCTTCTTCATCAAC 58841 30 100.0 36 .............................. TTTTAGGTCTACCTGTTGGTTTAGATACTTTGGTAT 58907 30 100.0 36 .............................. AAATAACTGACGCAAGGAGGAAATTATAATGGCTTA 58973 30 100.0 36 .............................. AAGTTTAAAAAAGCCTGTACATGCAAGGAATGCACC 59039 30 100.0 36 .............................. TAAGCTTGGTAGTCTATGTTGCTATTGCTTTCATCT 59105 30 100.0 34 .............................. TTACTAGCCCCACACGTCGGCAATATCAATCATA 59169 30 100.0 37 .............................. TCCTTTAATCAGATATTATTGTCTTATTTTCCCACAA 59236 30 100.0 36 .............................. AAGTCTAAATGCTTTTGATAAAGTAAAAGTATACAA 59302 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAC # Left flank : CATGTACGAGGAGTAGATAACCTATTCTGTGGTGGAGAAAAAAGCGGTTTATTCGTAGGTCATACAGAAGCCATATGTACAGGTTCTCTTGCAGGGCATAATGCAGTAAGATATGCTCTCGGCAGACCTGAGCTGGTACTTCCAACTGAAACTGCCATTGGAGATATACTAAGCTATGCCAATTATAAAATTAAAACTGCAGAGGGTAGAAAAAACAGATACACTTTTGCAGGTGCAGAGTATTTTAACAGAATGAAAGAAAAGGGACTATATACTACAGATAAAAATGAGATAAAAAAGAAAATAGAAAAATTGGGTTTAACAGATATTTTAACAAAGGCTTGATATCAAATTAAAAATTGGTATAGATTTATTCAATATAATTCTATACCAATTTATTTATAATAATTGTCTCTTTAATTAAAATGTTTGATTTTAATATTTTCAAAAATTTTAAGGTCCAACAGGTAATATATGGGCAAGTATAGAGCTTCTATGGG # Right flank : CCTGTGTAAAATAGCCATTCTTTAATTTCATTATAAGCTTTGAAAGCATATAAATAAAGGTTTTCACTGAATTTTTTCCAACCAATTTTTATTATGCATATATTTTATAAGAAATAACGTAACCCATTGATTCTAAATAAATTGAAGTGATTCTAAATAGAAAACAGGTTGGAAAATTCAAAGTATCAAGTTTTCAGTATTTTTATCATTTATACCTAAAGTTTCCTCTTCAAAGCAACTATCATTTATAAGTTTTATGATTGTGACAAAATCCTTATCTGCTACGATCTTATTTAATTCACTTTTTAATTTTATTAATTTAGATGGAGTTATAGATCCTCTAAAAACAGAATTTTGATGATGGTGGAAATACTTTTTACATATTTTAAATATCTTATTTACTCTTTTTTCATTTACATCATAAAATACAAAAGCATAATTAAAATTAAAATTTTTTCCCATTAAAATCCTCCATACTATATCATATTTTTCAAACTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 24899-25849 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNK010000008.1 Clostridium tyrobutyricum strain 1001713B170207_170306_A1 NODE_8_length_127969_cov_39.4101, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 24899 30 100.0 36 .............................. ACCTGCAAGTGCAGTCACAAATATCATCGATCTAGG 24965 30 100.0 37 .............................. ATACTAATAATCTGGATAAGACTCTTGACTATGGCTG 25032 30 100.0 36 .............................. TTAATTTCTTTGATTATATTTAAGAATATTTCTTTT 25098 30 100.0 36 .............................. TCTGCAATACATATAACTTTGTCATTTAGCTTTAAT 25164 30 100.0 36 .............................. GTATCAAATTTCACCTACAGACGAAGAAGGGGAAAG 25230 30 100.0 35 .............................. CTCTACCGCATGAATACAATTGCTAAAATCATAGG 25295 30 100.0 35 .............................. TCTATAACTAATATAGCAATGGTTACAGGTGATAG 25360 30 100.0 36 .............................. TAGTTTTACAGAGTATATAGATGAAGCACAAGCAGA 25426 30 100.0 36 .............................. TATCTTTTATAGCAGCATTAAGTATTCTCTTATAGT 25492 30 100.0 36 .............................. CTACTCAAAAGTAGGAACCCTTCCTACTCAAAAGTC 25558 30 100.0 36 .............................. AAAACACAAGTGTAACTTTCTCCTGTGTCTTCTGTT 25624 30 100.0 36 .............................. CAAGAACCAATGTTCCTGCTGCAAGACAGCTTTCGA 25690 30 100.0 36 .............................. CTATCTTTCTGTAGTGCTTCTTTTTGTTTAAGTAAG 25756 30 100.0 34 .............................. TTTTCAAAGCAGTTCTTTTACTTCTTATACTTTG 25820 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 100.0 36 ATTGAACCTTAACATGAGATGTATTTAAAT # Left flank : GCAAACAGATTATACCTATGCTTGTATTTGCCTTCACCATGAGGTCAGCTGGTCCTTTTGCAGCATTCATCTTTGGTTTGACATGGAAAAATGTTACAAAGCATGCTGGTATACTGTCTATAATTCTTGGAAGTATTGCTGGATTCTGGTGGCAATATCTCAATGAACCTTTTGGAATTATGGCTGTTATTGTGGGATCAGTTGTAAGTGTTATTACTTTTATTATTGTTTTTGAAATAGAAAAGGCCTTAGGCCATCCTTTAATACCATTGCATATTTCACAGAAATAGATATAGTTGAATTTTAATAATATAGATAAATAATTTTTCCAACCTCAATTACTTTTAAATATGCTATAAGACATTGATATAAGTATATTTGTAATCTTTCTTAATTCTAAAGTGAGATAATACAAAATGGTTGGAAAAATTTTATTAGATGGCTTTATTTTCAATGGTTTGGGAGTTATAATGAATTTAGAGAATGGCTCTTTTACTGTG # Right flank : TAACTCTGTAATTGCACTCCGTGCATTGCTATTGGCATTGAAACTAGACAAAAATCAATTGAATAAATATAGTCGTATATTTTTTTGAATTGTTTACATAAAATTTATATTTGTACGAAGTAAAGTATTTCAGATATCTTTTCATTTCAAAACACATTCCACCTGATACCTTTATATATCCTATAGATTGAAGTTCATGATCATCAATTATTTTTCGTAGTCTTTATATATATTTTTTTATATTAAAAGTACAAGAAATCTATTTTTCGGGAAATAATTGAAACTTTTAATCGAATATTGAAAAAGATAGTAAAATTTGAGTATTTCTACCTCAAATCCATTATGCTATAAAAGCTTTTGGCTTCTCCAACTCTCCATGAGGAATAAAGAAAAAATTTATATATATGTATATATAATATTATTTCAATAAGAATGGAGAGCTGAGCTGTTATGAAAAAATCAAAATTGATTAACAGTATTACCCTATTAACTATTATCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //