Array 1 17494-17995 **** Predicted by CRISPRDetect 2.4 *** >NZ_SELH01000024.1 Apibacter muscae strain AL1 NODE_14_length_28150_cov_197.372564, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 17494 46 100.0 30 .............................................. GTGAAATCGGTTGGATAGCTAAAGTAGAAA 17570 46 100.0 30 .............................................. ATGAAGATGGAACGAATTTAAGTTTTTATG 17646 46 100.0 30 .............................................. TATTTTTTATAACTTAAAATTTCATTTGGT 17722 46 100.0 30 .............................................. GGTGAAGTATCTTTAAAAAATTCAAAATAT 17798 46 100.0 30 .............................................. TATTAGATCGTTGGATATTGGACGGAATGA 17874 46 100.0 30 .............................................. GCGGGCTTGTTCAATTTGATTTTTAGCCTC 17950 46 97.8 0 ...........A.................................. | ========== ====== ====== ====== ============================================== ============================== ================== 7 46 99.7 30 GTTGTAACAACTGCTGTAAAGATACAAAATGAAAGGAACTCACAAC # Left flank : AGATGATTGGTTGTTTATCAATAAAATATATTTAAATGTAAATGGAAAAAATGTATGGAGCGGTGAAGCCAATTTTGATAGAGATAATTCAGGAGGGAGAATTTGGGAGTGGGCAGATTTAAAAATTGAGTCATCTTTTATTCCTGCATTAGTATTATTGTCAGAAGCAAAAACAGTTAAAATAAGATACGAAGGAGATAAGTATCATGATGATAGAGTTCTTACAGATAAAGAAAAAAAAATCATATCGAATACTTTAAATACTTATTTATTACTAAATGGACTTAACCGTGAATCGATTAAGAAATCGCATTTAGAAAATAATAATTGAATGAGTAAATTCAATTACTAAAATATTACTAATTAATTATAGATTTATTGAAAAATATTAGAAATAAAAAAACCGAATAAAAAATAATTTTTTATTCGGTTTTTTAGTTTTTTTTAATCCTAATTTAGTTTCTAAATATTTACCTATCAACTATTTATAGGATTAAAGG # Right flank : CACTAATTCTTGCATGGTATTGGGGTTTTAAAGTTTTATTAATTGTAATGAATGTCTTTGGTTGACCATCCTTGCAAATTGTTTGTTAATGTTTCTATTTGTTTTATATCTTTAATATTTATTACCTCTGTTGCGTTATTATCATTGACTAGTACTATTACATCCTCCCCTATAAAATCTACATAACCTATGTTACCATTAATATTGAGTCTTTGTTCGTAGGATATACTTATTGTTTTCATGGCTTTATTTTTTTAGGTTTATATCAGATTAAGTTTTTTAAAACATCTGTATTCTTGCTTTTCTGTGTCAAAATAAACTTGTACAAATTCATTTTTCTTTCTTTTGTCAATACCTGAAATTACAGGCAGGAATTTTTCATTTAAAGTACCCCAAGCCTCTCTTACTTCTCCATTTACTTTTGTGAAGTAAAATTTTACGATACCTTTTTTCATAGCTTGAACAAGTTTAAAATTTCTCCAAGCTTGTTTTAAACATTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACAACTGCTGTAAAGATACAAAATGAAAGGAACTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 45148-44494 **** Predicted by CRISPRDetect 2.4 *** >NZ_SELH01000025.1 Apibacter muscae strain AL1 NODE_1_length_435509_cov_189.679870, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 45147 46 100.0 30 .............................................. AGACTTTGAGTTAGGGTATGCTCCGGGAAT 45071 46 100.0 30 .............................................. AGTCGCACCGTATATTGCATCTTTTTGAAT 44995 46 100.0 30 .............................................. TATCTAAAATTAATTTCATATCTAAAATAT 44919 46 100.0 30 .............................................. AGTAGCATCATTAGGTCTTGTAATATCTCC 44843 46 100.0 30 .............................................. TGCTTTTTTTTATAACATTATCTAATGAAG 44767 46 97.8 30 .....................................G........ ATGTAGTTCATTCTTTACTTTCTTGTACTT 44691 46 97.8 30 ............G................................. ATACGATGACGGGCAACCTTTACCAGGCGC 44615 46 93.5 30 ............G........................G.......A GAATGATAATAATGTCAAAAACTTGTTATT 44539 46 84.8 0 A....T..................T...TG......G........A | ========== ====== ====== ====== ============================================== ============================== ================== 9 46 97.1 30 GTTGTAACAACTACTGTAAAGATACAAAATGAAAGGAACTCACAAC # Left flank : AAATGTATAATCGGAGAAAACCGAATCATTCGGTATCCTGAATTTGTATGAGCTTTAGTCGTTACAATGCATATAGAATCATGTGGGTATTAGTATTGTTTGATTTACCAACCGAAACCAAAAAGCAAAGAAGTCAAGCCTCTAAATTTAGAAGGGATTTGTTGGACGATGGGTTTACTATGTTTCAATTTTCTATTTATTTACGCAATTGCCCCAGTAAAGAAAATGCCGATGTGCATATAAAAAGAGTTAAAAATAAACTGCCCCAGTACGGAAAAGTAGGAATTATTAGTATCACTGACAAGCAATTTTCCCAAATGGAAATATTCTTTTCCAAACAAGCCTCCAATTTACCTTTAACTCCCCAACAATTAGAAATGTTTTAGTTTAGGAAATTAAAAAGCCATAAGAAAAAGTTTTTTTCTTATGGCTTTTAATTCTTTTTTTAATCCTATTTGAGTTTCTAAATAATTATCTATCAACCCTTTGTAGGATTAGAG # Right flank : CCTTTATAGTTATAAAAATATCCTTGTTTAAACTTTTACAAAGGTATAAAATTTAATTTATCAAACAAGGCATATCATGATAGTTTAATATATTATATTATTAACCTAATTTTTAAAAAGTTTCATTTTCAATACTTCAATACTAGATATAAACTAAAAAGATCGTGGTATGCTTTATAAAACAAGAATATTTTAAAATCACCACTATACCTTGTTTTCAGAGCTTAATTTATATTGAAGTTATTAAATAATTAAATAGAAAAAGCATCCGTATTGATACGGATGCTTTTTTATAGGTTGATATTTTTCAATTATTAATTCATTTTGAAACCCCTTCTATAAAATCTACCGTAAGGATCTACGTATTTTACAGAAACAGTACCGTTGTAATTTTTTAATAATCTTTCAATGTCTTTGTCACTATTTACAGGTTTATCATTGATTTCCATAATAATGAAACCTTCGTTTATTCCAATGGATCTAAGTTTTCCGTTGGCATC # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACAACTACTGTAAAGATACAAAATGAAAGGAACTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.39%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //