Array 1 12302-14588 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAHA01000018.1 Shimwellia blattae DSM 4481 = NBRC 105725, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 12302 29 100.0 32 ............................. TAAATTACGGATTTCTTTACATACAGAGATAC 12363 29 100.0 32 ............................. ATGCTCTTTGATTTCCGGCATCTGGATCGCAA 12424 29 96.6 32 ............................A TTTCCACATCACGACTAAATTTTTCTCTTTCC 12485 29 100.0 32 ............................. GAATTGGTTTCCTGATACAGGATTCTCCATTT 12546 29 100.0 32 ............................. TTTTCTATGGTTGCTTTCATCTCATTGATTTT 12607 29 100.0 32 ............................. TTCACGCACCAATTTAATTTCAGCCTCAGAAC 12668 29 100.0 32 ............................. CAACTGTGATATTATGTTTTCATTCCTAGCTT 12729 29 100.0 32 ............................. GGGCTTTCGCCCCAATTGTTATTCTTCTTCTA 12790 29 100.0 32 ............................. GTGATCACCATGGTCGGCGATGCGGTGCCGTC 12851 29 100.0 32 ............................. CCTGTTTCAGTATGGTTTTATCACCATCATTT 12912 29 100.0 32 ............................. AAATTTGCTAAGACTGTAAAACTGGTTAGCAA 12973 29 100.0 32 ............................. AAAACACAATTGCAGTGACCAGTGCTGCTAAT 13034 29 100.0 32 ............................. GTCCTTAACCGATTTAACGCGGCTGGGCAGGC 13095 29 100.0 32 ............................. CGCTTCCAGATTGTTTTTCATATCAGGGAATT 13156 29 100.0 33 ............................. CGCGTGGAGTCCAAGCATGACAACTGATATCAC 13218 29 100.0 32 ............................. CAACGGCGGAGAACCACGCATAAATCCGGTGC 13279 29 100.0 32 ............................. ATAGACAAGGCGATGATAAATATGATCGCCAG 13340 29 100.0 32 ............................. TGATTGGGATATATCCTAATTCAGCAATTCTT 13401 29 100.0 32 ............................. ATCGTTTAACTTCTCTTGCGGTGTCGTTTCCA 13462 29 100.0 32 ............................. AGAATGAATCTCTGTTTATTGAGCGAGCAACC 13523 29 100.0 32 ............................. TGGCAACGTTAATAGAACCTAATTTATCCAGG 13584 29 93.1 32 ............T...............C TATGATATTAAGAAATTGGCCCTGGAATGTGC 13645 29 100.0 32 ............................. CGTGGTTATTAAATTCACCGGCTGTGTTTGTT 13706 29 100.0 32 ............................. GAAACAAAATGGCTTATCAAACAGGTAAAAAA 13767 29 100.0 32 ............................. ATTATTGATATCGTTAACGCGGGCACGCTGTT 13828 29 100.0 32 ............................. GTCACCATCAGCAGTAGAAAACATAATGGTGT 13889 29 100.0 32 ............................. GTTCAGCAGTGCGAAGAATTTACGGTGAAATG 13950 29 100.0 32 ............................. GTGGCGGCTTCTTTTGCCGTGATCGGTTCTTC 14011 29 96.6 32 ............................C GATCACCCAAACCCATGGGTTAGCCTGCCAGC 14072 29 100.0 32 ............................. TTAAACGAATATGTCCCCTCGTCATTCACCAG 14133 29 100.0 32 ............................. TGCAACAACAGCACTAATAACCGCTACAGGAT 14194 29 100.0 32 ............................. AAATAAAAAACATGAAGAGATTCTCTGCATAT 14255 29 100.0 32 ............................. GTTTACCGCTATTCGTTTGATGTTGACTGGAT 14316 29 100.0 32 ............................. CAGATGGTCCCGCCTATCGTTGTGGCCGTGGC 14377 29 100.0 32 ............................. CTGAATGGCACAGTCGCGCCAGTAAACTGTTT 14438 29 100.0 32 ............................. CAGCGCTTACAGGTTCATTCCCCGCGAGCATT 14499 29 100.0 32 ............................. TGGCATATGGACACGGATGATCAGGTTTATAT 14560 29 75.9 0 A........A.C..C.T........C..C | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGATCGAGGAGATTCTGGCTGCCGGGGAGATCCAGCCACCACCGCCGCCGGAAGATGCCCAGCCGGTGGCTATCCCATTACCGGTTTCCCTGGGGGATGCCGGGCACCGGAGTCACTAACGATGAGTATGCTGGTTGTGGTTACGGAAAATGTTCCGCCGCGTTTGCGCGGGCGGCTTGCTGTCTGGTTACTGGAGGTCCGGGCGGGTGTCTATGTGGGGGATGTGTCGGCACGTATCCGGGCAATGATATGGGAGCAGATCTCGGTACTGGCGGAGGGCGGAAGTGTGGTGATGGCCTGGGCGACAAATACCGAATCCGGGTTTGAGTTTCAGACTTACGGTGAGAACCGCCGTATTCCGGTAGATCTTGATGGTCTGCGACTGGTCTCTTTTCTGCCTGTTATAAATCAGTAAGTTAACGTTCTTTAATAATCTGGAGAATTTGGTAGAATCAGAAACGTTAAAAAAATGCAGTAAATTCAGTTGTCTATATTTAGA # Right flank : CATGTGCCTGGCCCTCCTGCAGCTGTTGCTGTCAGAAATATCCCCGTTAAATGTAATTGTATTGTTAAGTAAATGCCGAATTGATCACAATAATTAAACAATTTGCCCGTTTTATACGCATTATCCAAAAATGTAGATATTTTTAATTTATGGCTACGAAATGAACATCGCCTTGTCTCCCTGATTATCAACAGAGGATAGATCCTGATGAACGCACTGACTGCCGTAAAACCCGCTGTCCAGAGAACCACCGGATTTACCATTGCCCCGAGCGTGCAATCGCCCCGTCTGCTGGAGCTGACCTTTAGCGCTGAAACTGCCCGGCAGTTTCTGGAGCAGGTGGCACAGTGGCCAGTGCAGGCGCTGGAGTACAAATCTTTCCTGCGTTTCAAAGTGGCCCGCGTGCTCGACGATCTGTGCGCGGGGCAGCTTCAGCCGCTGCTGATTCACACCCTGCTAAACCGCGATGAAGGGGCGCTGCTGATTGGTGCTGAGGGCAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //