Array 1 233879-236655 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT964761.1 [Lactobacillus] timonensis strain Marseille-P3825, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 233879 28 100.0 33 ............................ TCCCAGCTAGGAGCACCGTGGGCCGTCTTTAAA 233940 28 100.0 33 ............................ GATAATAAATATGTTTGCCAACTCGCTTAGTCG 234001 28 100.0 34 ............................ CTCCTCTCACATTGGATACTGCTTGGCATAGGAA 234063 28 100.0 33 ............................ ACCCAGACGTTTCTGATGAAGAGCGTGAAGCCA 234124 28 100.0 33 ............................ TGGTAGACACTGTGCAGAATGTCGGAACAACTA 234185 28 100.0 33 ............................ GTACGGACGCCAATATGGTACCGCACCGTCACA 234246 28 100.0 33 ............................ TAACATCAGGTTCATCGCTACCTGCGGGCCAGA 234307 28 100.0 33 ............................ TCGTTTTAAACAACGTGTTTGGCGGAAAGCAAG 234368 28 100.0 33 ............................ TCACTGGCAGTCCAACTGCAAGGGGTCAAGGCA 234429 28 100.0 33 ............................ CTTAATAATCAAGGATTTGTACAACAGGAATAG 234490 28 100.0 33 ............................ TCACGATCAAAGATTTTTTCAGCCAGCGAGTTG 234551 28 100.0 33 ............................ TGTAGCAACTAAAAGAGTCGGCAAACATATTTA 234612 28 100.0 33 ............................ ATCACGAAAGTGTCTGCCGCACTCCTAAAGCCG 234673 28 100.0 33 ............................ ACAGCAGTTTCAAATGTTGTGCCCTTTGGGACA 234734 28 100.0 34 ............................ TACTGGTAGCCAGTCGCTGGACAATTGTCTGAAA 234796 28 100.0 33 ............................ CATTGCTGCATCGTGACTATGATCGTGAAAAAG 234857 28 100.0 33 ............................ TTAGCGACATATTCCCGAGTGGCCACGTCTTGA 234918 28 100.0 33 ............................ GATTACATTAATTCCTACCAGTTTCAATTATCG 234979 28 100.0 33 ............................ AGGACGGAATCGAAATGAGGACAGATCATAGCA 235040 28 100.0 33 ............................ CCGCTTAGTCAGTTGACCCATCTTCTGCAGCTG 235101 28 100.0 33 ............................ AGAAGGCAGCCCGGACGATTATCAGGGAGCTGA 235162 28 100.0 33 ............................ AGCCTGAACCAACCTTTCACGAATACAAACATA 235223 28 100.0 33 ............................ CTGACTATGCTACTAAAGAAGACCTTAAGGCTA 235284 28 100.0 33 ............................ TCACTCCTTTCTTGATTTTTTATCTATACATAG 235345 28 100.0 33 ............................ ACATCTTTCATACCTATAACGATCCAGCCACCG 235406 28 100.0 33 ............................ TCAGCATAGATAATCCAGGCACCACTAGTCGTA 235467 28 100.0 33 ............................ GCAGGCTATCACCAGGTGTTGTGTCATCAATGG 235528 28 100.0 33 ............................ TTGTCACTAACATATTTCTGATCAAGTCGACCA 235589 28 100.0 33 ............................ ACTTGCGCTGGCGTTTGTCCAGCGTTGACACCA 235650 28 100.0 33 ............................ GGGGTTTCACCAGCGTTGCCGACACCGAAGCCG 235711 28 100.0 33 ............................ ATGTATCGACGCTAGGGATCGATCGTAGTCACA 235772 28 100.0 33 ............................ GTGTCCGTAATACCTTGATGGGACTATGTGATA 235833 28 100.0 33 ............................ TTCAATTGAACGGCCATCTGAACGATGTCAACA 235894 28 100.0 33 ............................ AAACGCCGTACTGTTAGTTAGTCGGTAAATCCG 235955 28 100.0 33 ............................ CCAATTTATTCATGAGGTCAATGACTTGGTCAA 236016 28 100.0 33 ............................ CGTGTACCAAACGGCTCAGCGTACTATTTAATG 236077 28 100.0 33 ............................ ATACCTGCCATGATACTGACGTTGTGATCACAA 236138 28 100.0 33 ............................ ACTCAAGTAGTATACCCGAGCGCCAGTCGTTTA 236199 28 100.0 33 ............................ CCATTGACCACCCGGACAACGAAGTGCACGCAA 236260 28 100.0 33 ............................ CACCTGAAGCTCGGTGATGACCAGTACCCGCAG 236321 28 100.0 33 ............................ TTGAGCCGGTGGCCAGCCCACAGGACAAGGCTA 236382 28 100.0 33 ............................ GTATCCTTATCCTTTAAGTAGCCAAATGGAATG 236443 28 100.0 34 ............................ CATCTGCTCTGGAAAACGATACGTAACTTGGCCA 236505 28 100.0 34 ............................ TGGTCCGGTTCGATGTTGCAACAGGATTTAAGTG 236567 28 100.0 33 ............................ ATTCTTGAACGTAAATCAAGGGCCAGACGTTGG 236628 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 46 28 100.0 33 GGATCACCTCCACACCTGTGGAGAATAC # Left flank : ACAAAAGCAAGTGTTTTTTCCCAGTATGTACCCTGTTGTTTTTAAGCATGGCAACCTTTGTAATCTATGAAGTTATGAACGTTTTTCATTTATTGGTCGCCATATTAGTCGTTGTCCTATTTGCCCTCGTTATTAAATTATTAGCCATAATACTCGGAGCTGTATTGTCTATCTTTAAATGAATATTGCTTAAGCCGATCAGTTAGACCGGCTTTTTGCATATGCAGGATGAGTTATGATCATCTCTACCTGTCCGTCGCAAAAATAATAGTTAGTTGTGTAAGCGGATCGCATCCATCTACATGGGGAATACGTTTTCGTCAACGTACGTCAACAATAGCCGGTAGGATCACCCCCCATCTACATGGGGAATACCCGTAGCAGTTATGTTCTTTGTGGCCATAAATAGGATCACCCCCATCTACATGGGGAATACTCATCAGACTTTTCGTTAGTAACTAATTTGTCATTAGCCTTTTCTTCATCAGACTTTTCATTAG # Right flank : CACTAAAAGATCCCTAAGCTGGCGCGGTTTTCAAAACGACAGAGCCCCTATTTTAATGAGTTTGATCGCCAACTGATACTCGGCTCGAGCGTCCGCCAATGCGTTGTGCGGCCGCTTATTTTCTATCTTATATTTTTGTAAAACCGTCGGTAATTGGTAGTTATCCAAAAAGAGGTCATGCTGTTTAACAGCCCTCATCAAGTCGATAAAGTCATTATCCAACCGCAAACACTCAACCTCATCACAAGCTTGTTGCAAGAAGTGCCGATCAAAGCTGGCATTATAGCTAATCACCGCTAGCGACCCGATAAAGTCCTTTAAAGCCGCCAAAACACTCTTCAATGATTCACCATGTTCGGCTAATAATTCATTACTAATCCCTGTTAACTGGCTAATCTTATCTGGTATTGACTGCTTAATCCGGATTAACCGATAGAATTCCTCCTGGTGACCGCCAACATTTTTCACAGCACAAATTGAAATGATTTCGTCTTTTTCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCTCCACACCTGTGGAGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //