Array 1 790-15 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUDC01000026.1 Clostridium sp. AM09-51 AM09-51.Scaf26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 789 33 100.0 35 ................................. GCTTATTATTTTTGAGAATCTGTATGTCATTGATT 721 33 100.0 33 ................................. ATCAACAGCAAGTCCAACATTTATGTAATCAAC 655 33 100.0 34 ................................. TTGACTATCCTGTTTTTAAGCTTAATTATGACAC 588 33 100.0 34 ................................. AAAAAAGGTAATAAGCCATAGTTTGCACAATATG 521 33 100.0 33 ................................. CGCAGCAGATAAGAAATTATCACTTACTATTGG 455 33 100.0 38 ................................. TTAAGGGATTTAAAGACCTATCGTAACGAAATGGTCTC 384 33 100.0 34 ................................. GCGTTGAAATACAGCTACGCAAGGAGCGTGCTGT 317 33 100.0 34 ................................. TTACTGGTCGGATAAAGATGAAAAAATGATTACT 250 33 100.0 35 ................................. TCTACCCCTCTGTTAGTACGAGGGGTTCTCGCCTG 182 33 100.0 34 ................................. TATTACACCATCAGGGATATTTATGCTTTCAAGA 115 33 100.0 35 ................................. TTAACTCCTTTTTGTTATATATGTAGATTTTATCA 47 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 12 33 100.0 35 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : TTTATTCTTTTCA # Right flank : TAGTTGATATTGAGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.10,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [16.7-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1949-14 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUDC01000023.1 Clostridium sp. AM09-51 AM09-51.Scaf23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1948 33 100.0 35 ................................. GGAAGTTTATATATGATAATCATATTAGATACTCA 1880 33 100.0 36 ................................. ATCAATACAAATACCGCTATTGATGTATTTAACAGC 1811 33 100.0 35 ................................. TTAAAATAATTGAAGATAATCCTCGAATAAAAGCT 1743 33 100.0 34 ................................. TGCATCAAGGTCTACCTCTGATAGAGACAAGCCT 1676 33 100.0 34 ................................. AAGACTTGAACAGAAGTTAAATGCCGTTACCCCT 1609 33 100.0 33 ................................. TCGATGTTGTTTTGATAAGCTTGTCAAAGTAAT 1543 33 100.0 35 ................................. TTGGGTGTCGGAACATTTGCCCGAGGTGACATCAG 1475 33 100.0 35 ................................. CTACTGCTGGCTTTGATTTTGGTAAAAGTGTTGGT 1407 33 100.0 34 ................................. CCAGCATATCAACTGGCTCTCAGACAGTGATGTG 1340 33 100.0 37 ................................. AATTATTTTAAAAAAGTTTTCATGCTGAGTGTGTAGG 1270 33 100.0 35 ................................. TATGTCACAAGTTATATCAATAAACTGTGATACAT 1202 33 100.0 33 ................................. TACGGATAATCAGCTTGCGAGGATTTATAAAAC 1136 33 100.0 36 ................................. TTACTTTTAAAACGACTATTTCTCGCTACATATTGC 1067 33 100.0 35 ................................. AAATAATAAAGATAATAAATATGAGCTTGCAAATG 999 33 100.0 33 ................................. ATAACAAGCTCCTTTATTGTTTATTCTTTTCAG 933 33 100.0 34 ................................. TGAACGGTCGTGTAACTGCTCTAATACAGTTTTA 866 33 100.0 34 ................................. AGTACCTCAATGGCTTTGAGAAGTCAATATATTG 799 33 100.0 33 ................................. GTATCAGTGGTTGGATTAAGTCTACGACGGCTT 733 33 100.0 37 ................................. AAATTTTATCCCACTTTTTAAAGCAAGATTTAAAATA 663 33 100.0 35 ................................. TGCCGCTCGCTGTAATGCTTTTGTCGCTTTATCAT 595 33 100.0 34 ................................. ATACTTTTTAACCCACCCCCTACCTCCTGCGATT 528 33 100.0 37 ................................. GCAAATTTGGGGACAAGCAGGGTTTACCGCTCAAGAG 458 33 100.0 35 ................................. TAAAAATGTTAAAACAAACAAAAACACATTAATTG 390 33 100.0 36 ................................. TGTACTTGCCTGGCTCCCAGCATATCAGCTGGCTTT 321 33 100.0 37 ................................. TTACTTTTGCGAAGTTTTGCAAGTTTTGATTCTGTGT 251 33 100.0 35 ................................. CTCTTGTGCGTTTGGAGGTAACTCAACATCTATTG 183 33 100.0 34 ................................. ATTATGAGCGAAAATACGATAATATGCAAAAACA 116 33 100.0 37 ................................. CGCAAAAAATGACATAAAGGAAAGTAAAGGAAAGGAA 46 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 29 33 100.0 35 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : | # Right flank : TGGAAGTTTATATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.10,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [16.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 109843-110686 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUDC01000007.1 Clostridium sp. AM09-51 AM09-51.Scaf7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 109843 33 100.0 37 ................................. AATACCATATAGAGAGCAAAGAGTATAGAGTGCTCCG 109913 33 100.0 35 ................................. ATATCTTTTGTTAAATCTTGTTGAAGATTTAGATG 109981 33 100.0 36 ................................. TCGGTATTGATAGAGATAATTTTATTGATTTACATC 110050 33 100.0 34 ................................. TGCCATAGCAATTTATTATGGCTATCAAGTTATT 110117 33 100.0 33 ................................. TAAAATTGATGATGAGCATACTATTATCCGCTT 110183 33 100.0 33 ................................. CACCAATTCAATGCTTTGCCGACAAGATAACCT 110249 33 100.0 34 ................................. CATATCAGTATTATTTTGAACAAGTAAATTAACA 110316 33 100.0 36 ................................. CGTTTTAGCTGCTTGGATAGCAGCCGTAGCCATATA 110385 33 100.0 35 ................................. CCTAATTATACAAAATAAGGATTTTGATAACTAAT 110453 33 100.0 34 ................................. AACCTTTAAGTAACATAGACGCTTCGGGATTGAA 110520 33 100.0 33 ................................. ACTATGGCTATCAAGTCATCTTGCGTTGGATAA 110586 33 100.0 35 ................................. AAACTTGCAATTTTGTCACAATATGATATATTACA 110654 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 13 33 100.0 35 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : GATCTTGATGGTTATCCGCCCTTTATGTGGAAGTAGGTGTAATTTATATGCTTGTGCTTATTACCTATGATGTAAATACTGAAACTACTGACGGCAAAAAACGCTTGCGTAAGGTTGCTAAAGAATGTGTTAACTATGGAAAAAGAGTTCAAAACTCGGTTTTCGAGTGTGTTATGGATGCAGCAACATGCAGGCTAGTCAAAGAAAAACTAATAAATATAATAGATGAGAAATTTGATAGCATAAGATTCTATTACCTTGGAAATAACTATAAAACTAAAGTGGAACATTATGGTATAGATAATACATTCGATGTGGAGGGAGTGTTGCTATTTTAGTGCGAATAGTAAGCTTACATAAATTTACAAGGATATTCGCACCATAAAAATATAATTTTGCAAATCTAATATTAAATCTGCTTTTATATACCTAACTATAATTTTGTGAAAAAGTGCAGATACATAGTTGATTTAAGAGTAAATATTATGTTGGATTTTGCT # Right flank : GGAAGTTTATATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1-6427 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUDC01000006.1 Clostridium sp. AM09-51 AM09-51.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================================================== ================== 1 33 100.0 34 ................................. AATAGAACAATAGTGTTCTAAAAGAAATTATACC 68 33 100.0 36 ................................. TGATTTTTTGAGTGTGTCACCTTATAGTTATCTTAA 137 33 100.0 35 ................................. GATTTTTTGAGTGTGTCACCTTATAGTTATCTTAA 205 33 100.0 35 ................................. GCAAGGGGGCAGGTACAAACTACAACATAATTACC 273 33 100.0 35 ................................. ATCTCTATCAACAAAGTAATAACAATCGTCAATGC 341 33 100.0 33 ................................. TCCGACATACGCTGAAATACATCCGCACCCCAT 407 33 100.0 36 ................................. CAGCATTAACAGTAGCTATTGTTCTGCGTTCATTTA 476 33 100.0 37 ................................. ATCACTGAAAAATACATTATTTGCAAGTGTTGCTGGC 546 33 100.0 35 ................................. CTTACCATAAGCGTAAAGACGGGTAGCAAAATTAC 614 33 100.0 34 ................................. ATTTATGCTCTTGATATTGTAATAAGTACCATCA 681 33 100.0 34 ................................. GCGAAGTGCTGGATTTTGCTGAAATCAATCATTT 748 33 100.0 35 ................................. TGATGGTAGCAAACTTAAAGTACACGATATTTTTA 816 33 100.0 36 ................................. TGGGACTACCCCAAGCACTTGGCTCAACAGTATGCC 885 33 97.0 34 ............G.................... AACAAAAACAAAATTTTTGAGTAGATACTCTCTG 952 33 97.0 36 ............G.................... GTATCGCTGGTACTGTCGAAGGGTTACTCCGATGAG 1021 33 97.0 33 ............G.................... CTCTGGTCGTTGGTGCTACTGTTGCGTATCTTC 1087 33 97.0 67 ............G.................... TAAGTAAAAGTATAACTGAAAGGGGGTGAAAATGTCGCTGTTTAAGTATAATAAGAGGTTTTCATCT 1187 33 97.0 37 ............G.................... CCTAAATCAGAAACAGTCAACGGTAATGAAGCCGAAG 1257 33 97.0 34 ............G.................... TATGCAAAATTGTATAGTTTCTATTTCGTCGCTG 1324 33 97.0 34 ............G.................... CAGCAATATGGGATAGAAACTCAATATTTGCGGT 1391 33 97.0 34 ............G.................... TTTAAGCTGTTGTCAAGTAAATATCAAAATATAG 1458 33 97.0 37 ............G.................... CTTTCCTCCTCGGGTGCCAAGAAGCCAGTCTACACTT 1528 33 97.0 35 ............G.................... TCTCAACTGTCAATAGTTTTCTTTAAAAAATTTGA 1596 33 97.0 36 ............G.................... TGACAAAAAATCATCCACTACGTGTCTGTAGTGCGT 1665 33 97.0 35 ............G.................... GCTTTTGTCATAAACGCTCCAAGTCATTGCGTCAC 1733 33 97.0 35 ............G.................... ATCAAGTTATCCCCCTTTTGCACGAGCGAGCGTTT 1801 33 97.0 35 ............G.................... ATTTGTCTTACTTAGTCTAAATTTTTAGGGGATTG 1869 33 97.0 36 ............G.................... CTTTTGACATATACAAAAATACTCATAGCTACGCCG 1938 33 97.0 33 ............G.................... GGCATTGCTCTCGTTAATCTTCGCCGTAACCTG 2004 33 97.0 35 ............G.................... AATTTTAGCACATTTGCAATAAAATTATACTTCAA 2072 33 97.0 35 ............G.................... AAAATGCAGAAGGTCAAGATGTTAAGTATGGTCAT 2140 33 97.0 34 ............G.................... TCGCCTGCGGTAGCTCAAAAACGCAACCGCAGGC 2207 33 97.0 35 ............G.................... AAGAAGAAAGATACAGCCTTGCGAATACCGAAAAA 2275 33 97.0 35 ............G.................... TCTTAATCTTGTAACATACATTATTAATACCTCCT 2343 33 97.0 34 ............G.................... ATAAAAACACCTGTTACATTACAATGCTTTGTTA 2410 33 97.0 34 ............G.................... ATTTTATTTTTAAGCTGATTCGCAATCTTAAAAG 2477 33 97.0 36 ............G.................... AAACGCTATCTCAACAACAATTATGTAGCTCGTCAA 2546 33 97.0 36 ............G.................... ATAAAAACACCTGTTACATTACAATGCTTTGTTACA 2615 33 97.0 36 ............G.................... CGGGTATTGTCGCATATTATCAAGCCAACTATAAAA 2684 33 97.0 36 ............G.................... GCACTGGCTGGCACAGTGTTTGCAGGCGGCGTAAAC 2753 33 97.0 36 ............G.................... AAAATAGAGAGAAGATTTATAACCATTGAAACCTTT 2822 33 97.0 35 ............G.................... AAGAAAGGGGAAGAAATGTTTTCTTATATGTTTGG 2890 33 97.0 35 ............G.................... TCTTAAATCTCTTAATCTCTTGTAATAGTAACCCA 2958 33 100.0 34 ................................. TGTGCATATAAAAGCCGAAAAACTTTGTGAATTA 3025 33 100.0 35 ................................. CACTTGCGTGTTTTTGTTATATAATTTTTAGCACG 3093 33 100.0 35 ................................. TCCTTTACTAATCAGCGTTTTGGCACTGGTAGTTT 3161 33 100.0 37 ................................. ACAAATTTGATAAGAAAAAAGCGTCTTGTTATGACAC 3231 33 100.0 32 ................................. TAGCTTCTTTCTCCCCCTGCTCAGGCGGACAG 3296 33 100.0 34 ................................. AATGAATGATTTGAAATGTATTCATACCAATTCT 3363 33 100.0 34 ................................. AAGACTTGATTATCATAGTGCTACAAGTCAAGAT 3430 33 100.0 36 ................................. AAAATGATGTTTGATGCGGAGACTTGGAAAATTATA 3499 33 100.0 34 ................................. ACAGATAAAGCGACAGGACAAATGAAGTCATACG 3566 33 100.0 35 ................................. CGTGGGATAAAACAAAACAAACAATCCGAGACAAA 3634 33 100.0 36 ................................. ATCGCTACTTGATATTTAAAGACTATCTACAAGCTG 3703 33 100.0 35 ................................. CGAAAAAAGACTTGCCCATTCCACAACATCAGACA 3771 33 100.0 36 ................................. GTGTAATCTCAAGCGGTGACACTGTACAATTAAATT 3840 33 100.0 35 ................................. TTAGGCACTGTAAGATAAGTGCTTTCAACAACAAG 3908 33 100.0 35 ................................. ATACAAATACACGCTCAGTAACAATGAGCCGCCCG 3976 33 100.0 34 ................................. AAACTCCCAGTCAAGCCGTCCGAACTGAATATCA 4043 33 100.0 33 ................................. AGCTCGATTATATGGACGAAGAAAATATAATCG 4109 33 100.0 34 ................................. TTTGCTGTATCGATATTCTTTGTTTTATTACAAG 4176 33 100.0 34 ................................. TGTAAATCCCTCCATTGATTGGCTGTACGACTGA 4243 33 100.0 34 ................................. AGCTGGCTTATGGGGTAAGTCCGGAAACATCTGG 4310 33 100.0 35 ................................. ACCTGTTTTTTGTGAGTGCTGAGTATCCCAGACAT 4378 33 100.0 34 ................................. ATGGTCACCACCACTCTTAAAATAAAATAACAAC 4445 33 100.0 35 ................................. CATAATTGCAAATCAATCCTCCGCTGACACGCTCG 4513 33 100.0 34 ................................. CTGGTATCTTCGCTGCACAGATGTCGCAGTTATA 4580 33 100.0 34 ................................. TTTGCAACTGCAAAGCTCCCTGGAGATTACATAG 4647 33 100.0 34 ................................. ATCACTTTTCACCTTTGTGTCAATACCCCTTTTA 4714 33 100.0 34 ................................. TTGGCTAACTTTTTGCGTGTTGTATCGTCTACAG 4781 33 100.0 34 ................................. AATTATGTTATCCATTTTTCGTACCTCCGTTATT 4848 33 100.0 36 ................................. GGTGTTAAAGAAAATGCAGAAAACAGCGATTATAAC 4917 33 100.0 34 ................................. AAATCTCACTAATGTCACTCTTGGTAGCGGATTT 4984 33 100.0 35 ................................. AGAACTTAAAGATTTTATGATATTGTTGGATTTCA 5052 33 100.0 34 ................................. AGCAATAGTCAGAAATATAAAGGCTTGTCTCTAT 5119 33 100.0 32 ................................. TTCGGATTAATTAATTGAAAGGGGGTGTAAAT 5184 33 100.0 35 ................................. ATCATCACACTTAGAAACGAATGAAAAATAGTCAA 5252 33 100.0 36 ................................. GTTGAGTATGAATATAAACATCGAGCTTTAAAAAAT 5321 33 100.0 34 ................................. TATCTCTGACAGTTTGCGTCGCTTTGTCCCACGG 5388 33 100.0 33 ................................. TGCACTTGCGTCACTAACAGCAGGAGTTGTTAC 5454 33 97.0 35 ............G.................... CATATATAAGGCTCCCACTTTTACTTTTGAGAGCT 5522 33 97.0 37 ............G.................... AGTAAATTTTAACCCGCATAGGGAAAGGAGTAATTTT 5592 33 97.0 33 ............G.................... ATAATTATTGTGTCCTTTAATATGTTTTCCTTG 5658 33 97.0 33 ............G.................... TTTAATACTTGCGACATCGCCTTGCTTTGCGTT 5724 33 97.0 32 ............G.................... AACATTAAGGCTCACACTAATATTGCTATGTA 5789 33 97.0 33 ............G.................... ATACTTGCAAAGGGTATTGCAGGGTGCAGTAAG 5855 33 97.0 34 ............G.................... TGCGAATGTACTTAATTATATCGCTATGCTGTTA 5922 33 97.0 34 ............G.................... TTAGAGCTACAGTTGCACAGGTACGCCTAAATCT 5989 33 97.0 33 ............G.................... TATTATATTTACTTTAGAATAGAAGTGTGCTAT 6055 33 97.0 34 ............G.................... TTACCATTATAGAGTGCATCACCGATAGTATTAC 6122 33 100.0 36 ................................. TTTTAAATGATGTGCGAAGCCTCCCTTATCTTGCTT 6191 33 100.0 36 ................................. GTGTTTTACGATTTTGAAAATGTGGATAATGATTGT 6260 33 97.0 35 ............G.................... TTGGTATAAAAAGCGATAACCAATATGTAAATCTT 6328 33 97.0 34 ................................C TTTAAGTCTATGGCTAATAAGGCAGGCTAATCAA 6395 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================================================== ================== 95 33 98.7 35 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : | # Right flank : TTTATGTTTTTGTGACACTCACAATTAAAAATTGTGGTAGGACTGTGAAGAAATTTCTTTTGACATGTATAGTCAAAAGATGTATCAACATCTACATATCCTGTTCGTACAAAGTGGTTGTTTATGAAGGTTTTGTTGTCAAGATACATATAGCACATAAGATTATTTTCTGCATCATATTTTACAGTATCATACCTCAAGAATATCTTTCGTTTACGAAATTTCTCCTGTAAAAACCTGATGGCTTTTCCTTGATATAGTGGGTTAGACTTGATACCTAACAGACGAACTACAAGTCCATTGCTAAATTCGATTTTATCAGATGCAATTACTTGCTTTACGCTAAAGAGTTCATTGCGTTTTGTTTTTGTCTTAGCAATCTTTGAACCAAATTGAAGTTTTTTCATATCAACTTTCTTATCCATTCTATAAGGAAGCTGATTAAAAGATGAAATGTTTCCAATTTCGTCTTCTATAAAAATACCTTTGTGTCATCGTCT # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.84, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : GTCGCTCTCCTCGCGGAGAGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //