Array 1 239376-238388 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZOW01000012.1 Laribacter hongkongensis strain PW3643 NODE_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 239375 28 100.0 32 ............................ GCCGAGGTCACCGGCCACCGCACCAGCGATGG 239315 28 100.0 32 ............................ CGCTACAGCAGCCGCGACGACAGCGACGAGGA 239255 28 100.0 32 ............................ TGCTGGCAGCGGTGGATCAGGTCGACCTGGGC 239195 28 100.0 32 ............................ GATCAAGCTCGACAATGATGAAAAGCCAAGAC 239135 28 100.0 32 ............................ AATACCGCCACCGGCGTCGGCCAGGTCATTTT 239075 28 100.0 32 ............................ TCGGGTAACTCGCGCGTGATACCGAGCCGCCG 239015 28 100.0 32 ............................ ACGCACCACATGCGCCACATGCGGGTCGCCCG 238955 28 100.0 32 ............................ TGCTGCAAAACCCGGATACGGCCGCCGAGGCC 238895 28 100.0 32 ............................ AGCACGGCATTTGATCTGCCCGCCGAACAGAT 238835 28 100.0 32 ............................ CAGCCACCTGGTCCACGCGGCACGTTCCGCCT 238775 28 100.0 32 ............................ GCTGGATGCGCTGGTGCTGTAGCCAGAGCGTT 238715 28 100.0 32 ............................ GTGATGCGAGAGCCAATCACGGCCAGCGAGCC 238655 28 100.0 32 ............................ ACAGCAGCCGGCAGCGCGGTCGTTACCGTGCC 238595 28 100.0 32 ............................ TGCACGCGGGCGCAGGGAATGAAGGTTGTCAG 238535 28 100.0 32 ............................ AGCGTGGCAATGCGCTGGCCGGTGTAGTCGCG 238475 28 100.0 32 ............................ AAAGTCTCCGGCCAGCATTGCAACGATGCTGT 238415 28 82.1 0 .....................GA..TCT | ========== ====== ====== ====== ============================ ================================ ================== 17 28 98.9 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : CGGAATCTCATGCACCGGACAGGCCCGCACTTCGGCCCGGCCCCAGCCGAGTTCAGCCGCCAGCCGCCGCGCCAGAATCCACCAGGTTTTTTCCGGCAGGCTCGTCAGCGGCAAGGCGAAAAAAGGCGTCTTGCAGGGCGGCGTAGTCGCGCAGGGTGAGGGCACGCAGGTCGGTGTGCGCGCAGTCGCACAGGCGCGAGAGCATCATGATTTCGCGCTCCTCGTTGCTTTTGGCCAGCTGGTTGACGGTGATGCCGTTGAGCTGGACGGGCTTTTTGAGGGTGATGACGATTTCGTTCATGACGGGGCTCCCGGAATGAAAAAACCCGCCGGGTGGGCGGGTTGGAAATGGTTGTTTGAGTGAATCAACGACCCTTTTTCAAGGACATGTTTTCCATCCTTGAAATTCAATGACTTGCAGGGGTTGGGAGAAAAAGGGTAATTGCATGGGTAAGCGGTGACTCGCTTGTTTTTACAAGGAAAAACGCAGAAACTCTGTA # Right flank : GATTCAGTGATCTGGCGGATCTGGTCTGACATCGCGTTGAAGGCTTCTTTGATTACCATGACTTTATTGCCCGGAAAAACCCATCACCAGCAGCATGAATCCATCCTTTGTCATCTGGCATAACGGTTACGGCTTCCCCCTCTCCAGCAAATGGGTGCCCACGGCGGATAGCGTTGCTGGAGGAATTTGGCGCTACCTTTTCGGGTCGCGTTCCCTGGCCGTGGGCGTAAAAAACCCGCGACCGGAATCGCGGGGTATTGCTTACAACCCGATGGCCGCCCGCTCGGCAGCAAGTTCGTCGGTGCCGTTGATGATGCGCACGCAGTTGACCGGGTCTATTTCGTAGATGGCGCGACCGTCGATTTCCAGCTTGTAGTAGCTCAGGCTGGCGGTGTACTTGGTTTCGCCTTTGTCGCCAGGCTTCCAGCTGCCCATGTCGACCTCGGACAGCAGGCCGCGCCAGGTCACTTCGACCTTGATGACGCCGCCTTTCTGGTCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 175653-177063 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZOW01000034.1 Laribacter hongkongensis strain PW3643 NODE_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 175653 28 100.0 32 ............................ GCCAATCCGGACAAGGCAACCGTTGTGGCATA 175713 28 100.0 32 ............................ TACGACCATGCCGCCGGCGCGCTGTCGGCCAC 175773 28 100.0 32 ............................ TTTCATCGCAGGAGAGCACCTGATGCCTGCCA 175833 28 100.0 32 ............................ GCCTCGAAGCCCACCGCGCCGCCATCGGCCGC 175893 28 100.0 32 ............................ CCGGGCTGGCGATCGACCAGTACACGGTGACC 175953 28 100.0 32 ............................ GCTATGACGACCAGTCGATGAGCTTCGGCGTA 176013 28 100.0 32 ............................ ACATTACACCAGTAGCCACCAGATCCGGCCCA 176073 28 100.0 32 ............................ GTTGTGGGCGAGGCACGGCTGGCCAGTGCCGC 176133 28 100.0 32 ............................ TCGACCGACAGCGCCCATGCAAGCCATGGCAG 176193 28 100.0 32 ............................ AAGCGCCTGCAATGTTTTGTCGATGCTTTCAA 176253 28 100.0 32 ............................ TTTGCCCGCCGCTACAACGGCCCGGCGTACCA 176313 28 100.0 32 ............................ TCCTGCAACAGCTCGCCGACCCGTACCAGCTC 176373 28 100.0 32 ............................ TGAACCTACGCGACGACGGGAAATCGGCATTT 176433 28 100.0 32 ............................ TGCATGAAATGGAATTGCTGCAAATCCGCTGT 176493 28 100.0 32 ............................ TCTCCGCGTGAGTAGTATCTCTCCTTCCCCCA 176553 28 100.0 34 ............................ CGCATGGCTGACGCCGGCGATTGCCGCATCAGCG 176615 28 100.0 32 ............................ TGGCAGACCGGCCGGCTGGGGGTGGTGTGGGA 176675 28 100.0 33 ............................ TGCGTCCGCGATCTGGTACACGCGGGTTTCGTT 176736 28 100.0 32 ............................ GTCAAGGCGGTGATCGAGGTCGAGAGCCGGGG 176796 28 100.0 32 ............................ TCCAGCCTGTCCACCGTCAGCAGGGCGCGGGC 176856 28 100.0 32 ............................ AATCGCCGGCATGGGTGGGGGCTCGGCATGGG 176916 28 100.0 32 ............................ GTGCTGGCCAAGCTGGCCGAGACCGGCGGCTT 176976 28 100.0 32 ............................ TCGCCAAATCGCTCGGACAGACCGTCCACCAG 177036 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 24 28 100.0 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : CGGCATGCGCGACCACGTCACACTGGGCCACATCCTGCCAGTACCGGCTGCGGCCAGCCTTGTCCGCGTGCGGCGCAAACAGGTCAAAAGCAACCCGGCCAAGGAACGCAGCCGGCTGATGCGTCGCAAGGGGGTCAGCGAAGCTGAAGCGTTGCGGCTGATCCCCGACGACAAGGCCAAATGGCTGGATCTGCCTTACCTGACACTGAACAGCCAGAGCACCGGCCAACGCTTCTTGCTCTTTATCGCGCAGCAAGCGGCCACTCAGGCGGCCAGTGGCGAATTCAACGCCTATGCCCTGAGCCAGACCGCCACCCTGCCAGCGTTTTAAACGGAGAAAGGGTGCGGCCAGTCTTATCATGCGGGCCGTACCCTTTTCTGGATGGGTAGATGCTGATCTTTAAAAATCATGAATTTACGCATCCGGTCGGGAAAAGGGTTTTGAGCAGTAAAATCGCTCCATGCCTTGACTGACAAGCCATACCGTCGGAATGGCTCTA # Right flank : ACCTTGAAGTTCGCGTGGTTGGTCAACAAGATCAATCCCTTGTCGGTTCGCTGCAAGGACGGAACGGAGCGCCGGGATCCGACGCCATGAACCATGCGTTCACGGCGTTTTTCATCGCCTGTTCCATGAGTGTCAGCGACTGCTGCGGTTAGCTGGGCACAGCTCAGACAGTCATTCTTTATTCTTTTTTGGGATTTAAATTCTGTAATTTGTTCTTTGTTGGAATATATCGTGAGCATCAAAATGGTATCACCCTAATCAGACATCAATAGGTGAGCCAGATGAAATCCCGATCCCTGTTTGCCACGGCTGCACTCCTCCTCTGGTCAGCCACCACCATGGCCGATACAACATTGCTCAATGTGTCGTACGACCCGACGCGGGAGCTTTACAAAGACATCAACAGCGACTTCAGTCGTGACTGGCTTCAGCGCGGTGGCGAAGCGCTGACCATCAAGCAGTCGCATGGTGGCTCGGCCAAGCAGGCCCGTTCGGTGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 154001-154388 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZOW01000067.1 Laribacter hongkongensis strain PW3643 NODE_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 154001 28 100.0 32 ............................ GCGCGATACTCGACTTCGACATTGGCCTGACG 154061 28 100.0 32 ............................ AGCGTGTAGCGGTATTCCCACGACAGCGAGGC 154121 28 100.0 32 ............................ GTCGGCCGCCGGCTTTGCCGGGGCGATGGCTG 154181 28 100.0 32 ............................ AGCCGCATGTCGGCAGCCGGCTGCCGCAGCTC 154241 28 100.0 32 ............................ AGACTGGCGCGTTCCATGCCGGCGATGCGCGT 154301 28 100.0 32 ............................ TTGCCCGACCGGGCCAGCCCGTTGATTGCGGC 154361 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : ATTTTTTTGTTGTGGCGATTTCTTTTTGTTGTCTTCCTTCAATTGCTGCTCTTGTAACAATTGGTCTTCCATTTGCATTGATGCGAAATGGAATAAGCATCTGGCGCAGAGCTTCAATCTGCTTTGATTTGAATTTTCGACCTGTCAATAGCGCTACTTCTTCAGTGGTTAGAAATAGTGGATCTGTGTCAACCATGATTTTTCCTTTTTCTATATTCTGCTTTACGCCGCATGCAAAAAAGAAAGTCGCACGCGGGGGCCATAAACGATGAAGCCCGCTGATGCGGGCTATTGTTGGTGAGGTTGAGTGTCGGTTGTGAATGTTGAGACTGCCATATGACGCAACAGCAGTTATGGCTACCTGGTGCAGGACCCTTTTAAAAATGATCTTTTCACTTCCTTTTAATTCAATGGGTTACATGTATCTGCTGGAAAAGGGTATGTCCATGGTGATGTTCAGATATGCTTGTTTTTGCACAGGAAAACGTAGAATATCTCTA # Right flank : ATGTGTGGTCGGCTTTGTTGACTTCAATTCCGCTACAGCGTTTCGCGCAGGACTTTCTTGATTTGATGGTGCGGGATACGCAGTGCCTTGCTGGCCTCTCATATCTAACGAATCAGCCCGCTGGCTATCAGGGTTCAAGCGGGTTTTTCATTCCACACAACATGACCGATCTAAGTCCGGTCTGTCGGGCCAGCCTGGCGACTTCCTTCCTTTGCTTGTTGTGCTGCCGGGAGAGTTTGCGCCTGGCGATCGATTCAGCGGTGCGGGTATGTTGGACATTGAGCCTGCGGGCCTCTGTCAGCCGGCAACCGCATGATGTAACAGACCCTGCCTGTACGAACGGGGCCGGTTTTTCAACGACGGCGCCACAATCGCACTGGTAGAGCCACGTCCAGCAGTTTGTGCGGCCTTTTCTACCCGTTTTTTCGATACCGACCAGCCGGCCAAAACGCTTTCCTGCATGATCAAGTGCGATGGCTGCCGCCTGGGCCTTGGCCAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //