Array 1 34775-33862 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIQF01000040.1 Enterococcus faecalis strain CG_E ENFAE_contig000040, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 34774 37 100.0 29 ..................................... GTGTTTCCCATAATTAATCATCTCCTTCT 34708 37 100.0 29 ..................................... TTGTACACCTCTTGTTGTTCTAAATGAGT 34642 37 100.0 29 ..................................... CGACCAAAGCGAGCTTCGTGAACGTCTTC 34576 37 100.0 29 ..................................... CCAGAAATAAAAGTTGACGTAAGTATTGA 34510 37 97.3 29 ....................................T AAGGGCAAAACTGAAAACGATACAACGAT 34444 37 100.0 29 ..................................... GGTACAATTTATGGATTGTCACATGTCAT 34378 37 97.3 29 ....................................T TATGCAGAAAAATTAGAGCAGCTGAAAAA 34312 37 100.0 29 ..................................... AACAGCTTCACTAATCATATCAATCGCTT 34246 37 100.0 29 ..................................... TTTACCGCCAAACTTATACCAATGGTGAA 34180 37 97.3 29 ....................................C TCGTTAGAATGCCCTTCACAGCTGTTAAA 34114 37 94.6 29 ..................................T.T CTAATGAGCATTCATTACATATGTAGAAC 34048 35 81.1 114 ......................TT.--.CG......G ATATGATTGATGTAAAAATATCATTGATATGTATAAATATGGTTATTATATAAAAAATATAAGTAACGAATTAAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [34016] 33898 37 70.3 0 A...........C...A....TT.CTT...G..T.G. | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 13 37 95.2 36 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : AGCACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTACTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAAAAAATAATTCTCCGAG # Right flank : GAGTACGATTAGTTAAATATTTAGTTTTACAGCTATGTTGTTATTATATGTGTTGAACGAAGTTATTGATTTTAAAAGTAGTTGTTCCTCCTTTTTTTATATGCTACAATTTTTCTATATTAATCATTAGTTAAATATTTAAGGAGGTGATTATAATAAGAAGGAAAGGATTTAACAAAATAAAAAAAGAAATGGAATATGTTAAAGTAGTTACGAATTTACTAATGGTATCAAAATTTTTTACGCTACAGTCCGATGAAGATTTACATACATTAACTCTGTTTGGAACATTACTTATTTAATATTTATAGACGCTTTGTAATGAATGCGCTTTCTACGAAACTGGATAATAAAAATTGGCATTTTTCAAATGCTACTTTATGTAGTTTACTTTTTTATAGTGGCTATGTATGTTCGCATTTATTTCTTTTGAATAAAAATCACTTATCTATAAATCAAGAATTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTT # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.59, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //