Array 1 69046-69928 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414692.1 Synergistes sp. 3_1_syn1 supercont1.3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 69046 32 100.0 34 ................................ GATCCCCCAAGGGCGGGAGCTGTGGGAGAGCCTG 69112 32 100.0 33 ................................ ACGTCCCGGTGAAGTAGCGGAGGCTGTGTGGGC 69177 32 100.0 34 ................................ GCCGACGCGGGAATCAAACGCGACCCGGTAAAAG 69243 32 100.0 33 ................................ TTTTCCTGCGATGGTTCCGCGCTGGCAGTGCGT 69308 32 100.0 33 ................................ GAAACATACATCTAAAATAAACGGCACCGTCAC 69373 32 100.0 35 ................................ GGAAGAGATAACGGGAGACGGCAATGTCGCCGACC 69440 32 100.0 33 ................................ GGCGGCTGCGCCGTACTGCTGCATTCGTTTATT 69505 32 100.0 33 ................................ TGGCCCTCTATGCTAGTACCATTTACCTGTGGC 69570 32 100.0 33 ................................ ACCAAGGCGGGTTCTGCGACCACAGCCGACAAA 69635 32 96.9 33 ..............G................. AACTTCGACGACATATCCGTCTTATTCGCGCCC 69700 32 96.9 33 ..............G................. CATCCAGCGAGGCCGCCTACACACTCTAGCCCG 69765 32 93.8 34 .T............G................. TGTATATGCCTTTGCCCATGTTGAGGCCATGCAC 69831 32 93.8 34 .T............G................. GCGTCCACGCAAACGTGCTCCGTGTGCGGGCACA 69897 32 68.8 0 .T............G........CTA.CGGCG | ========== ====== ====== ====== ================================ =================================== ================== 14 32 96.4 34 GCCGCACCCCTCGCAGGTGCGCTAGTTGAAAC # Left flank : GGATTTGGAACCATGAAATATGCGAATATTTTATAGTTCGCGCAATAAAGGAAAAATATGGCTAGTATTATTGCTCAAAATTGTTATTCCGCCGCACCCCTCGCAGGTGCGCTAGTTGAAACAGCATGAAGCTTCTTCTTACTAGTGCGCTTCCTGCCGCACCCCTCGCAGGTGCGCTAGTTGAAACTCCATCCCCATATGTAGCACCAATAACTGCGAAAGCCGCACCCCTCGCAGGTGCGCTAGTTGAAACACATGGTGACATGCTTGATGCAGAGAGCGGTCTTTACGCGCCGCACCCCTCGCAGGTGCGCTAGTTGAAACACATGGGCTACTACCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGCAGGTGCGCTAGTTGAAACTTGTCGAGCTGCTTCGTCGCGGGGATCTCCACCC # Right flank : GGTATTCGCGGTATTATATTATAATTACCTTGAAGCTGGGGAGACTATTCTGATTTGAAGGGGGGCGGCTGCATGCTTGATCTTACCATCCTTACCGACAACAATACGATCATCGACCGGTATTATCTGGGGGAGCCGGGGCTCTCTTTTTGGCTTGAGTGCGGCTGTAAAAAATTTCTGTTTGACACGGGTTATTCCGATGTTTTTATCCGCAACGCGGCGCTGATGGGCATCGACCTGACGCGGATGGACGGGCTTATCTATTCTCACGGGCACAACGACCACACCTGGGGTACGCATTCGCTCGTCGCGCTCTTTGACCGTCTGGCGGTTGAGCGCCGGCCGCTGCTTGTCGCGCACCCGCTGGCGTTTGAGAACAAGGTGCACGGACGGCTTACCATTGGGGCGATGATGGGGGCGGAGGCGCTGGGCAATTATTTTGAGCTTGCGCTTTCCGCCGAGCCGCGCGAGCTTGCGCCCCGGCTTTGGTGGCTGGGGGA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCACCCCTCGCAGGTGCGCTAGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 91341-91704 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414697.1 Synergistes sp. 3_1_syn1 supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 91341 32 100.0 33 ................................ GATTGCTACGCCGGCGTTAATTAGTGCCCTTAG 91406 32 100.0 35 ................................ CATGCGGCGTCCGGCTCTTCACCAAGCTCTTTTAT 91473 32 100.0 35 ................................ GAGTAGTTCCCGCCGTTGTTGCTCTGCCCACCCAT 91540 32 100.0 34 ................................ GTGTTCTGCCAGGAACTTTTTGTGAGTTTCAAGC 91606 32 96.9 35 ............A................... CTCAGCCAGTTGATCAAGCGTAATAAGGTTACGCA 91673 32 90.6 0 ...........................C.GG. | ========== ====== ====== ====== ================================ =================================== ================== 6 32 97.9 35 ATTTCAACTCACCCCCGCGAGGGGACGAAAAC # Left flank : ATTTCAACTCACCGCGAGGGGACGAAAACTTCCTTGATGACCGATATTTCAACATCAAGATTTCAACTCACCCGCGAGGGGACGAAAACTACCTTGCTTACTCAGCCGGAAACCTCATTAATATTTCAACTCTTGATGTCTTCAAAATTATACGCGAGGATGCTCATTTCAACTCACCCCCGCGAGGGGACGAAAACCGCATTGCCATTGTTTTTTATGTACGCTCTAAATGATTTCAACTCACCCCCGCGAGGGGACGAAAACACAGCCACACTACCCGTAATATAAGTAATATCTATTTCAACTCACCCCCGCGAGGGGACGAAAACTGACCAGCGTTTCCAGCATGGAGACCGTTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAACTTGATGTCTTCAAAATTATACGCGAGGATGCTC # Right flank : CGTGTCGTATGGCGTATTGAAGTGATTGGGATAGTTGTTTCAATACGCCTCGCCCGCGACACCGGCGTCGAAGATCCCTACATGAAAGAGGCCTCCGGCTTCCTCGACCGCCTCAAAGCCAGGACCCCGGGACTCTCCGCCGATCTGCCGACCCAATACTCATGGCTCACGGGAGAGGCCAGGACCTTCGGAGACTACAGCCTTGTCAACTTCGTCCCTTACAAAGAGAGCACAGACGACCAGATACACGCCGAACTCCTCTCCTACGGCGCGAAACTCGGAGGCCCGTCGAGGACCCAAAACGGCGTCCGTCTATCCGACGAACAATACAGCCGCCTCTGCGAACTCCACGGCACGTTGAAAATCGGAGGCCTCACGCTCATGCAGGCCCTCGAACGTGAAGCCCGCTCCGCAGCCTACCGGAAAGTGCCCGAAGGCGACGCACGCATGAAAGAACTCAACTCCGTAATCGGCAAATATCGCATGGAAGCCAGAAACCG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAACTCACCCCCGCGAGGGGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 2 671499-672390 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414697.1 Synergistes sp. 3_1_syn1 supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 671499 32 100.0 35 ................................ ACGTAAAAGCAAGTGCACGCGACCGCAAAGAGGGT 671566 32 100.0 34 ................................ GCGTTATGGCGGCGGCTCGCATCTGCAATGGAAC 671632 32 100.0 33 ................................ CGGTGCAACGGCGGCGGGGGATTCTGTTTATTC 671697 32 100.0 34 ................................ CGCGGCAGAACAGACCTCGGCCTCGCTGGACCGT 671763 32 100.0 34 ................................ CAGACCCTTGTGAGCGAAAGCAACATGGGTTATG 671829 32 100.0 34 ................................ GCCATTTCGGTGCGTATCTACCGCCGCTTCAAAT 671895 32 100.0 34 ................................ TACATCACAGAAAGGGGCCTATAACCCATGTGCA 671961 32 100.0 34 ................................ AGCGCGCAATCTCCCGTTGCACGCTGATAGCAGC 672027 32 100.0 35 ................................ CCACCGCGAGAGTGAAACTCAGCACGCTCTTGCCG 672094 32 100.0 33 ................................ GATGCGCAGCGCTGCCTCTGCCGCGGCATAGGC 672159 32 100.0 34 ................................ CCCACGCGAACGGCGGGCGCTCTTTGAAGAGCCA 672225 32 100.0 36 ................................ CAGGTGGCGGCCATACCCGAGCCGCTCAGCCAAATT 672293 32 96.9 34 ........................T....... TTCCATTCACCGGCGATGCCTGGGCAAAAGCTTG 672359 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 99.8 34 ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Left flank : ACCACGCGCGGAAGGATTTTAATCCACACGAGCGTGAAGCTCGTGACAACGTAAAAAGCAAGTGCAGCACCGCAAAGAGGGTATTTTAATCCACACGAGCGTGAAGCTCGTGACCAAGCATATCGCTTTCCGCCAGAATTTCTAGGGAATTTTAATCCACACGAGCGTGAAGCTCGTGACGCATGCGGCGATGGCTGGAAAAGGACGTTTACAGCTATTTTAATCCACACGAGCGTGAAGCTCGTGACTTTATATTACACATACATAGTCATGTTGTAAATTAATTTTAATCCACACGAGCGTGAAGCTCGTGACCCTTCTTCGGCTACTTCCTTGTCTGGCTTATATGTATTTTAATCCACACGAGCGTGAAGCTCGTGACCACGTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTATATGT # Right flank : CAGGATGCTGGACGACGGCCGAGTGCTGGACATCAAATTTTAATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCGTGACTATTACGCCACGACTATTACTACCATACCGGAACATTTTAATCCACACGAGCGTGAAGCTCGTGACGGGCGTGCCGTGCGTGGTGGCTGCGATGGCTATGGCATTTTTAATCCACACGAGCGTGAAGCTCGTGACTGCACCCAAAAGTCCGCTCTCGCAGCAGCGGATATTTTAATCCACACGAGCGTGAAGCTCGTGACTTGGAAGAGGCGCTATTCCAATACCAGCGCCTAATTTTAATCCACACGAGCGTGAAGCTCGTGACAAACCTGTTTCCTATGCGCGACGACCACAGATAAATTTTAATCCACACGAGCGTGAAGCTCGTGACGTCCCTCAGAACAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [11.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 672579-673998 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414697.1 Synergistes sp. 3_1_syn1 supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 672579 32 100.0 37 ................................ GGGCGTGCCGTGCGTGGTGGCTGCGATGGCTATGGCA 672648 32 96.9 33 T............................... TGCACCCAAAAGTCCGCTCTCGCAGCAGCGGAT 672713 32 100.0 33 ................................ TTGGAAGAGGCGCTATTCCAATACCAGCGCCTA 672778 32 100.0 34 ................................ AAACCTGTTTCCTATGCGCGACGACCACAGATAA 672844 32 100.0 34 ................................ GTCCCTCAGAACAGGCGAGGAGGTTGTCGTCAAG 672910 32 100.0 34 ................................ TCAATGCAGGCGGTAGCTTGCATCGTTGGGGAAA 672976 32 100.0 34 ................................ AAGCAAAGCGAAACAAATTAATATGCTTTGTGTG 673042 32 100.0 34 ................................ ATGGGCCAACTGCTCCATTCGCCGGCGATGCCTG 673108 32 100.0 34 ................................ GCAGGAGGCGGAGGCTCTGGCCAAGGAACATTTT 673174 32 100.0 36 ................................ CAAATTCCCGCCAGTCAAACTTTTCGTTGCGGTGCA 673242 32 100.0 35 ................................ TGGCGTCCGCCACCCTCATAACACGCTGTTTCGCC 673309 32 100.0 35 ................................ ACCCCACTAAAACATTTCGCTCCACATCTCTCACA 673376 32 100.0 34 ................................ GCTCCTTCACCACATACAGGGATACGCCGCGCAT 673442 32 100.0 34 ................................ TGTTGCGAAGCGGTATGTACATACCGCCCGCGAC 673508 32 100.0 35 ................................ GCGGCGCTCACCGCGTTTATACCCTGCTCAAAGTC 673575 32 100.0 33 ................................ TTTATCATCGCAATCAAGAACTGCGAGCTCCAT 673640 32 100.0 34 ................................ GTTTTCGCAAACACCAAGAGTGCTACCAACTATT 673706 32 100.0 33 ................................ CGAGCCGGCTGTGATGCGCATGTCGCGCATTAC 673771 32 100.0 33 ................................ ACACAACCCTTTTTAAGATACAAACCAGGAACA 673836 32 100.0 34 ................................ GATCTCTTCCTTGAGCATCTTCACGGCAAGCGGC 673902 32 100.0 33 ................................ CTCAATCTCGCCACGCACCCACCGCGACACGGT 673967 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 22 32 99.9 34 ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Left flank : AGCACGCTCTTGCCGATTTTAATCCACACGAGCGTGAAGCTCGTGACGATGCGCAGCGCTGCCTCTGCCGCGGCATAGGCATTTTAATCCACACGAGCGTGAAGCTCGTGACCCCACGCGAACGGCGGGCGCTCTTTGAAGAGCCAATTTTAATCCACACGAGCGTGAAGCTCGTGACCAGGTGGCGGCCATACCCGAGCCGCTCAGCCAAATTATTTTAATCCACACGAGCGTGAAGTTCGTGACTTCCATTCACCGGCGATGCCTGGGCAAAAGCTTGATTTTAATCCACACGAGCGTGAAGCTCGTGACAGGATGCTGGACGACGGCCGAGTGCTGGACATCAAATTTTAATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCGTGACTATTACGCCACGACTATTACTACCATACCGGAAC # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCACACGAGCGTGAAGCTCGTGACATAGAGTATTCCGCTTCTTGTTCTCAAATAAATTATTTTAATCCACACGAGCGTGAAGCTCGTGACCCGTGCCTACGCGCTGCCCTTCGAGGAGGAAGATATTTTAATCCACACGAGCGTGAAGCTCGTGACGCTCAATCTCGCCACGCACCCACCGCGACACGGTATTTTAATCCACACGAGCGTGAAGCTCGTGACCCTGCTTTTTGCTTTCTAAGAGCTGTAATGTGTTATTTTAATCCACACGAGCGTGAAGCTCGTGACGCTACACCCGCAGAAGCACAGGAAGCCCTAAAAATTTTAATCCACACGAGCGTGAAGCTCGTGACCGCGCTTAATCACGGGCCGATGATGTTTACAATATTTTAATCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 4 674160-674852 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414697.1 Synergistes sp. 3_1_syn1 supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 674160 32 100.0 34 ................................ CCGTGCCTACGCGCTGCCCTTCGAGGAGGAAGAT 674226 32 100.0 34 ................................ GCTCAATCTCGCCACGCACCCACCGCGACACGGT 674292 32 100.0 34 ................................ CCTGCTTTTTGCTTTCTAAGAGCTGTAATGTGTT 674358 32 100.0 33 ................................ GCTACACCCGCAGAAGCACAGGAAGCCCTAAAA 674423 32 100.0 33 ................................ CGCGCTTAATCACGGGCCGATGATGTTTACAAT 674488 32 100.0 37 ................................ GCGCTGCGGAGGGCTTTTCAGCCTGTTTCTGTTGTAC 674557 32 100.0 33 ................................ CTCGCTTTCAATAAACTCGCCGCCGTGCTTGCC 674622 32 100.0 33 ................................ AAGGTATTTACGTTATATGAAGCGGAGATGCCG 674687 32 100.0 34 ................................ TGACGCATTGTTATTAGTAGAAAGCATGGGAGAG 674753 32 100.0 36 ................................ GCTGCGGCGTTTTTACAGTAACACATGTCCGCGTTT 674821 32 96.9 0 ...............................N | ========== ====== ====== ====== ================================ ===================================== ================== 11 32 99.7 34 ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Left flank : GAAGCTCGTGACGTTTTCGCAAACACCAAGAGTGCTACCAACTATTATTTTAATCCACACGAGCGTGAAGCTCGTGACCGAGCCGGCTGTGATGCGCATGTCGCGCATTACATTTTAATCCACACGAGCGTGAAGCTCGTGACACACAACCCTTTTTAAGATACAAACCAGGAACAATTTTAATCCACACGAGCGTGAAGCTCGTGACGATCTCTTCCTTGAGCATCTTCACGGCAAGCGGCATTTTAATCCACACGAGCGTGAAGCTCGTGACCTCAATCTCGCCACGCACCCACCGCGACACGGTATTTTAATCCACACGAGCGTGAAGCTCGTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCACACGAGCGTGAAGCTCGTGACATAGAGTATTCCGCTTCTTGTTCTCAAATAAATT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGAGCGTGAAGCTCGTGACCCATGCGCTTTTATCGCTTCGTTGGGAAGATATTATTTTAATCCACACGAGCGTGAAGCTCGTGACCTCAAACCCAGCGGAAGCCGCCCGCGCGTGGGCCATTTTAATCCACACGAGCGTGAAGCTCGTGACCATTCGATATGTTCATCCTCGCATCACCCACCCATTTTAATCCACACGAGCGTGAAGCTCGTGACGATTGGCGGACCGGCTACGGGCGAGCGTGGACACATTTTAATCCACACGAGCGTGAAGCTCGTGACACGTGATCAACGAACTAGAGGGGGTGTGCAGGTGATTTAATCCACACGAGCGTGAAGCTCGTGACTGTGGTATCGATCATGAGTGTAGTTAGATGTGCGTATTTTAATCCACACGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 5 675739-677024 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414697.1 Synergistes sp. 3_1_syn1 supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 675739 32 100.0 34 ................................ CGGGCATAGAGGAGGGGCTAAAATGAAAATAATC 675805 32 100.0 34 ................................ TTGGCTTTTCCGCATACACTGGAGCACCAACATC 675871 32 100.0 36 ................................ CGCGGCGATCTTGGCCTCGTAGTCGGCTAAGAAATC 675939 32 100.0 33 ................................ CAGTACAAAGAAAAAGCGTTTCAGCGAGCAAGA 676004 32 100.0 33 ................................ ATCAAAATATCCCCAAAAATTATCACGGCGTGC 676069 32 100.0 32 ................................ GTTCATCGAGATTCATACGGTGGAAGAGCTGC 676133 32 100.0 35 ................................ TCATAGATAGTTACCACTTCGGCATCAGATTTATA 676200 32 100.0 34 ................................ AAAACCCGCCCATGCTGTCCCAATTTTCGTATAT 676266 32 100.0 33 ................................ CAGGAAAAAGAGAATCTCGAAGAATACGCGAAC 676331 32 100.0 35 ................................ TCAAGCCAAGAGGGCCCAGAGCCATGAGATAAAGC 676398 32 100.0 34 ................................ GGGCGGCAACACGATCAATATGCCGTTCTTCGGC 676464 32 100.0 34 ................................ GCATTTCAGGCAAAAAATACCGTCCTTTTGTTCG 676530 32 100.0 35 ................................ CGAAATGCTGGAGGAGGGCAAATCAGCGTGGAGGC 676597 32 93.8 35 TA.............................. CAACCGCCACATATTTCAATTTAGATGCCAAACTG 676664 32 100.0 34 ................................ ACGGGTGCTGTATGAAGCTATTTCCCCAAAGATA 676730 32 100.0 33 ................................ ATGTTAGATAATACAGTAATAGCAACGGTAAAT 676795 32 100.0 34 ................................ GCAGCGTTTCTACGACGACGACAAACAGGTGATG 676861 32 100.0 34 ................................ GTGCGCCTCGCAGCCTGCGCGCTGTTCGGCTACT 676927 32 100.0 34 ................................ CATGGATAAACTTGTAGATTTTATCAAACGCATC 676993 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 99.7 34 ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Left flank : TGATCAACGAACTAGAGGGGGTGTGCAGGTGATTTAATCCACACGAGCGTGAAGCTCGTGACTGTGGTATCGATCATGAGTGTAGTTAGATGTGCGTATTTTAATCCACACGAGCGTGAAGCTCGTGACGAGGCCCGTTGACTCCAACCAAGCAAGCCGCCTTTATTTTAATCCACACGAGCGTGAAGCTCGTGACGCCACGAATCAGCCTCTGCGCACTAAAAGGCGATTTTAATCCACACGAGCGTGAAGCTCGTGACCTGCAGCGGCATGTTGAGCGCATGGATGCCGACGCAATTTTAATCCACACGAGCGTGAAGCTCGTGACTATGTCGCCATATTGGATCCTGGCAAAATATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGACGACTCCATGACGGCGCTCATCCGCGCATTCCGT # Right flank : CGCGCTGTTCCGGCTTCAGGAGCGCGAAGCTGCGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCGTGACGCGCGCGCGGTGGTGCGGCAGGGCGAGGAAATACATTTTAATCCACACGAGCGTGAAGCTCGTGACATGATCGATGGCGGTAGGGCCGGAGGCAGCAGCATTTTTAATCCACACGAGCGTGAAGCTCGTGACGCACCAATCGAAAAATACATGTCGGCAAACAAAATTTTAATCCACACGAGCGTGAAGCTCGTGACGCTCCTTCACCACATACAGGGATACGCCGCGCATATTTTAATCCACACGAGCGTGAAGCTCGTGACTGATCTGTACGCAAGTTACAAACCTCGGTACGATATTTTAATCCACACGAGCGTGAAGCTCGTGACGCACCCTGCGTCCCTGCCCCGCGCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCCACACGAGCGTGAAGCTCGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 6 678688-677204 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH414697.1 Synergistes sp. 3_1_syn1 supercont1.8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 678687 32 100.0 34 ................................ TCTGCTGGGGGCGGTGATGCGTATTATGCGCCTT 678621 32 100.0 35 ................................ TGAGAATCAGTACCACGAGCATTTAAAGAAGAAAA 678554 32 100.0 34 ................................ TGAGTGGTTCGAGGAAGACTCACAAACAATAATT 678488 32 100.0 34 ................................ ATCAGCGAATATTCCATCAATGCCGAGATATGGG 678422 32 100.0 34 ................................ AAAAAAGACACATCGGGTCAGTATAACGATTCCA 678356 32 100.0 33 ................................ AACGTGACAGCCGAGTGTGGCAAGTACCTGAAA 678291 32 100.0 35 ................................ AATCCCTTTTTTTGCGGTAGTTATAAGCGGTTGCA 678224 32 100.0 34 ................................ ATAAACACGTTGCCGCTTCTTGTATAAATGATTA 678158 32 100.0 33 ................................ CCGTACCTGTCGGGAGAGTATCAGTTCAGGTAT 678093 32 100.0 33 ................................ AACAAAAAGGATCAGAATTTACGGGTCGCCTGT 678028 32 100.0 35 ................................ TGACGCGTGGCAACTGCCTGACCTGCGAAGGGAGA 677961 32 100.0 34 ................................ TTCCTCATAGGCTGTGTTTAGTGCGGTCTGTATG 677895 32 100.0 34 ................................ CAGCATAATCAACAGCGTGAACGAAGATGAGAAC 677829 32 100.0 34 ................................ TCGGCTGCATTCGCAGAGCCGGCTGCTCCGGAGG 677763 32 100.0 33 ................................ CATGGTGACAACGGCAAACGCCGGAGGTGGTCG 677698 32 100.0 34 ................................ CATAATGGATCGTGCATAGAACAGCCGTTATCTG 677632 32 100.0 35 ................................ CGAAGGCCGAAGCGGTGCGGGCCATTCCCGCGCTC 677565 32 100.0 35 ................................ TTCGGCGATGAGCGCGGGGCAGGGACGCAGGGTGC 677498 32 100.0 34 ................................ ATCGTACCGAGGTTTGTAACTTGCGTACAGATCA 677432 32 100.0 34 ................................ ATGCGCGGCGTATCCCTGTATGTGGTGAAGGAGC 677366 32 100.0 33 ................................ TTTGTTTGCCGACATGTATTTTTCGATTGGTGC 677301 32 96.9 34 ...............................A TGCTGCTGCCTCCGGCCCTACCGCCATCGATCAT 677235 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 23 32 99.9 34 GTCACGAGCTTCACGCTCGTGTGGATTAAAAT # Left flank : ATCCGCCATTTTATTGGAAATAATTCATAACGAGGTATTGCCATGCTTCTTTTGATAACTTATGATGTAAATACAACGACGCCAGAAGGCAGGAAACGGCTGCGCAAAGTTGCTAAAATATGCGAAAACTACGGACAAAGGGTGCAGAATTCAGTTTTTGAATGTTTGGTCGATCAGGCCCAGAGATTGGAGCTCTGCCATGAACTAGAGAAGATAATAGACACAAAAAGTGACAGTCTGCGATACTACCAGTTGGGAAATCATTGGAAAAGCAGAGTTGAACATGTGGGCGCAAAGGATACTTTTGACCCGGAAGGTATCTTGATTCTGTAGCGCGGACCGGAAGCGGACATAAAACTACAGCAAGGTCCGCGCCGTTGGTTTTGCAGCAGCGCACACCTTATTTGTTGGAAAACACACCTATTATTTAGTGTAAATCTACTACGTTTGCGTTTTGTATCGAAAAATATATTGATACTAGCGTATAAAACTTATGAACG # Right flank : GTATTTCCTCGCCCTGCCGCACCACCGCGCGCGCGTCACGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCGCAGCTTCGCGCTCCTGAAGCCGGAACAGCGCGTCACGAGCTTCACGCTCGTGTGGATTAAAATGATGCGTTTGATAAAATCTACAAGTTTATCCATGGTCACGAGCTTCACGCTCGTGTGGATTAAAATAGTAGCCGAACAGCGCGCAGGCTGCGAGGCGCACGTCACGAGCTTCACGCTCGTGTGGATTAAAATCATCACCTGTTTGTCGTCGTCGTAGAAACGCTGCGTCACGAGCTTCACGCTCGTGTGGATTAAAATATTTACCGTTGCTATTACTGTATTATCTAACATGTCACGAGCTTCACGCTCGTGTGGATTAAAATTATCTTTGGGGAAATAGCTTCATACA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGAGCTTCACGCTCGTGTGGATTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //