Array 1 35889-35528 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPD01000025.1 Desulfovibrio desulfuricans strain MCC432 NODE_25_length_35810_cov_71.993271, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 35888 32 100.0 35 ................................ ATCGTAGCCATGATCAAAGCTGGCGGCTGAAACAA 35821 32 100.0 33 ................................ TTGTATCTCTGGTGCATCCATTGAGGCCGTTGA 35756 32 100.0 34 ................................ AGGTTGGACAGAAGGATGGTGGGTCGAACGCTTC 35690 32 100.0 34 ................................ ATCCAGCGCGACAAGCTATGCTTCCGCAAGATTG 35624 32 100.0 33 ................................ TCCGTGGTTGTCAGCATGTTGCTGCTGGCCATC 35559 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 6 32 100.0 34 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Left flank : T # Right flank : GGGCCACGGTGGGAACGCGACGAGTTCGGGCATGTCGCTCCCCGCGCGGGAGCGACTTATGTGGATTGATATTATCATGAGCACAGCCCATACATGCCGCAGCAACTGGAACCTGCTGTTCTGATTTATCTATTGCTTTGTTTTGAAGATGTCTTGCGTAATATATAACCTATTTGCATTTTTGTTATAAACATTGTGCTGATATTAAACTGCCTCCGTTTCCTTGATTTTTATCCTCGTCACCATAATCCTTTCCCGCCGTCTTCCGATTAATACAGAAGCGGTATCTCTGCATTTTACCAGCCTCAATATTCTCCATTGAAGGGGTTGATCTTGCAGGCAAAAATTTTATATGAGCAAAAGTGTCCCGGAACTGTATGATGGCTGCAACAATAGCAACGTATCTGGTGGATACTGTAAGCAGAATTCTACACTTGCAAAAGGGCTTGTTATGAACAGATCCATATCGCTCAAGCTGATGCTTGGCATTGCGGCAATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [30.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 18331-19353 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPD01000029.1 Desulfovibrio desulfuricans strain MCC432 NODE_29_length_19276_cov_68.222504, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 18331 32 100.0 33 ................................ ACGGTACAGGAGCTGGCAGCCGCCCAGCGTGTA 18396 32 100.0 34 ................................ ATGTAGGTACTTTTCTGTCGTACTCAAATTTTTG 18462 32 100.0 35 ................................ ACCAGCTCCCATCCCCCGCATGCCCTACATGCGAG 18529 32 100.0 34 ................................ TAACGAGGCATCACCATCCACAACAAAATCTGCG 18595 32 100.0 34 ................................ TACCAGTTCGTGGCATACGGCGGCGATGGATGGG 18661 32 100.0 35 ................................ ACGTAAACGCAGAGGCGGCGCGCAAATTTTTAAAT 18728 32 100.0 33 ................................ AGCATTGAACATCTGGAAAATTTCGCGGGATCG 18793 32 100.0 33 ................................ GACCACGTGGACTGCCAGGCACTGCTGCTGCGC 18858 32 100.0 34 ................................ TGCATGGCGCGCGAAGTCTTAAAGCGCACGCTAA 18924 32 100.0 33 ................................ TTTATAGCCGGGATATCTCGAATAATCACGCAT 18989 32 100.0 35 ................................ CCGTAGCGTTATGCCGCAGGCCACGAAAAACAAAT 19056 32 100.0 35 ................................ TGCGCATAGCTGGAAAGCCCGCGCACCACGGGGAA 19123 32 100.0 35 ................................ AGGATAGATAGCCCTGGCCCGTCGCGGGCTGGTCA 19190 32 100.0 34 ................................ AGCAGCAAGCTGCCCTACTTTGTTTCGGACACCC 19256 32 100.0 34 ................................ CCGTTATGTATGGGCGCGTATGGCCTCCGATATG 19322 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 16 32 100.0 34 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Left flank : TGCGCCAAATAGCCCGCCATTGCGAAAACTGGGGGCAACGGGTGCAGTTTTCAGTTTTTGAATGCGTGGTTGACCCCGCCCAATGGGTCGCCCTGCGCAATAATTTGCTGGAATGTATGGATGAAGAAAAAGATAGCCTGCGTTTTTACTTTTTGGGTGCCAACTGGAAGAATCGTGTTGAACATGTTGGGGCCAAACCGTCCTATGACCCTCAAGGGACGCTGATTCTGTAAATCGACAGCATTATTACATGCGGACGGCTGAGAGAGTCAGCAGATATCCGACTGGCTGAAGGGGACTCTGTGAGCTGCTGGCAATAGCCCGCGAGAACCAGAAGCGCACAGCATTTTTCTGGGAGGTTCTCGATTTTTTAACAATATGATTTTATTACGGTAATTTTTTAAAGCAGATTTGTTTATTGCATAAATTGATCGAGATACGTGGCCTGCTCGAAAAATGCCCTGAATATCATTGCGGGGCAAAGGTAAAAAAGGGCCACA # Right flank : CGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 48-939 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPD01000039.1 Desulfovibrio desulfuricans strain MCC432 NODE_44_length_859_cov_43.292202, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 48 32 100.0 34 ................................ CGGGACGATGGCCTTCTGCTGGCCCTGACCTACA 114 32 100.0 34 ................................ AGGGTGACGTTACCAGCATCGGTGGCCTGGAGTT 180 32 100.0 34 ................................ CAGGCTTGCCCTGGTGAAGTAGCTGGCCAGAACA 246 32 100.0 34 ................................ CCACGGCTCGGACATATAGCCGTTTGTCCAATCC 312 32 93.8 34 ...........CA................... CGGGCAGTCTATGCCATAGACGCGGATTGTCACC 378 32 93.8 34 ...........CA................... TCCTACAATCTCGGGATTGGCAAGCGCGAGGCCA 444 32 100.0 34 ................................ GTCACGAACACCATTGCGGCACTGAAAAGCGCCA 510 32 100.0 34 ................................ AACCTGAACACCGCCAACGCCGACGAATGGCTGA 576 32 100.0 34 ................................ TCGCCCATGATGTTGCGCACGTATGCCCGGTTGA 642 32 96.9 34 ......T......................... ATCCTGCTGATCCTGCGGGCAGTTACGAAAATCA 708 32 96.9 34 ......T......................... ATCCCACCCGCTGGGTGTGGGGCTGACCGTGATT 774 32 100.0 37 ................................ ATGGTGTAAGGCTGGTCACAGTAAATTTGCGCGCCAG 843 32 100.0 33 ................................ TGTCCTTGTTAGCCGCGTTGCCGGAAGTGCCTA 908 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 14 32 98.7 34 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Left flank : CGTGGATTGAAGCGCCAGCGTTGAGAGCATGCACACCGCCAGCCGTGG # Right flank : | # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [28.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //