Array 1 861704-853906 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017803.1 Methanobrevibacter smithii strain KB11 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 861703 37 100.0 34 ..................................... TGTCTAATGTTATACATATAGTCCCAGCATTTAT 861632 37 100.0 39 ..................................... TATAATCATCATTTAACTCTGGAATTGCATCTAACCTAT 861556 37 100.0 36 ..................................... ATTAATTTGTGTCCTTTGTAAGAATTTGTGAATACT 861483 37 100.0 36 ..................................... TGGCATATACTGCCCATATTGAGTCCACAATTCATT 861410 37 100.0 37 ..................................... ATGATAGAATAATAAGTTTCATGTCTAATGAATTATT 861336 37 100.0 37 ..................................... AATACTTTAATACATTTTTTAATGTTTTTAAATCTAT 861262 37 100.0 35 ..................................... ACTCCAACATACATGTTAAAATATGTAGCATCTGG 861190 37 100.0 34 ..................................... TTGTGCTAAATGCATTATTTATGATAGTTGTCAT 861119 37 100.0 35 ..................................... TAAACACCAGTTTGACCTTCCATAATTTTGTCAAT 861047 37 100.0 34 ..................................... CCTTTTATTTTGTCTAAAAACAATTATCTCAAAT 860976 37 100.0 36 ..................................... ATTGTCCCTGATGTATTTAATATATGATTTTTCTTT 860903 37 100.0 32 ..................................... CTTTCTGTGGTTCGTAACCATCTTCTTCCATT 860834 37 100.0 31 ..................................... ATATACGATTATCTCAACATTCATGTAATCA 860766 37 100.0 36 ..................................... TGTATTAACATTATCCCTTTTTACAGTGTTTCTTCC 860693 37 100.0 36 ..................................... GTTATTGTATTTGCAACTCATAACTGAACACCCCAT 860620 37 100.0 37 ..................................... TTGTTTTATCCTTACTATGAATATATTCCCTAACCTT 860546 37 100.0 36 ..................................... TATTTTTTTTAGCTATAACCTGATTCCCATTAATAA 860473 37 100.0 38 ..................................... ATTTCTTTGTATATTTGCATCGCTTTATCAATATCATC 860398 37 100.0 36 ..................................... TTTCTCTCCAAAATTTCGTATTATGTGTGTGGCATG 860325 37 100.0 35 ..................................... CACCAGTTTGACCTTGTAGCCCTAATTCCAACTCT 860253 37 100.0 34 ..................................... AATTTGTGCATTTTGTAAAAAGTCGTTGATATTT 860182 37 100.0 34 ..................................... GTTTTATCCTCTTTTTTCTGTATGTTTTGTCTAT 860111 37 100.0 36 ..................................... TTTTTTTTCATAATATTACGCTCCCATCAGGCATAA 860038 37 100.0 36 ..................................... GGATAATAATAATCCTCCTCCTTGTCACTTACTTGT 859965 37 100.0 36 ..................................... AATCATCCAAGCATAAACAGTTATCATCTACTAACA 859892 37 100.0 35 ..................................... TTTCTTTGCCATCTAAAAAGTCCTTAGTGCTTAAT 859820 37 100.0 35 ..................................... ATCCTAAAAGTTTAAATTCCATTTTAACACCTTGA 859748 37 100.0 34 ..................................... AAATCTTTTAAATTACCATTAAAAGCGCTATAAT 859677 37 100.0 35 ..................................... AGTGGATGATATATAATATCATCCTCCTTGCCCCT 859605 37 100.0 33 ..................................... AGAACTGTATAAATCTTTTTTTTGCTACTATAT 859535 37 100.0 35 ..................................... AATCCTTCATACTCAACATAATTGACATTAGCTAA 859463 37 100.0 35 ..................................... CAGTTTAACTGCCCCACAATCTGTTTGGAGAGAGA 859391 37 100.0 38 ..................................... TTGTAACACGTACATATTTTTATAAACCCCCTTGTCCG 859316 37 100.0 35 ..................................... TTAATATCAATAATATCATCAAATCCCCTTTCTGT 859244 37 100.0 34 ..................................... TCCTGTTAAATATCCTTTTGCTGATGCTGGTGAT 859173 37 100.0 35 ..................................... AATACTTTACTTTGATATATTGATTATATTTAAGT 859101 37 100.0 35 ..................................... CAGATTTAAAATTTAAATCCTGTAGGGTTAAATAT 859029 37 100.0 35 ..................................... TCTTGTCTTCTTTTTTTATTCTTTGTTGCTTATAT 858957 37 100.0 35 ..................................... ATTTATAATAGTTCTATTGGCCTTAACCTGATAGT 858885 37 100.0 35 ..................................... TTTGCCTATAAACTAAAATTTCTACCTTCATTTAT 858813 37 100.0 35 ..................................... GCTTTCGCTTTTTAAATTTATTTTATTACTTATTG 858741 37 100.0 36 ..................................... ATTGATAGCTTTTGTTGTCTTCTTTTGTTGTCTTTT 858668 37 100.0 36 ..................................... TTCTTCCCCGTACATTATTCTTTTATAGTGACTGAG 858595 37 100.0 35 ..................................... TGTATAAGTCCATTAAAACATGTGTCGTCGTGTGT 858523 37 100.0 35 ..................................... CTACATACCCATTTTGATGTATACTTCCATTTGCG 858451 37 100.0 36 ..................................... TGTATACTTTTTTTGTTATAATTAATCCGTTTATTT 858378 37 100.0 37 ..................................... TTTAAATATTCTTTGGTGCTTAGCAAATCGTAACTTT 858304 37 100.0 37 ..................................... TGCAAATACTTATTAGCTCAAAAAAACCATTAATATT 858230 37 100.0 34 ..................................... AATAAAATCATTAGTATTTAATAAGTTATAAGTT 858159 37 100.0 36 ..................................... CTATCTTAGTATTAATTACTACAAACCCGTTATAAT 858086 37 100.0 35 ..................................... TTTGTTCCCTTCCATACATTCATGTTATCACCCGT 858014 37 100.0 38 ..................................... TTTGCTTATCCTCTTTCTGTAATATAACCTGTTTATAT 857939 37 100.0 35 ..................................... TGGAAATATAATTGGATTAGCTTTTACCTTCCGAT 857867 37 100.0 33 ..................................... TTGATTTTAATAATATTAAATCCATAATTTTTC 857797 37 100.0 36 ..................................... TGAACAGTCTTTATTGGACCAATAGTTACTATATTG 857724 37 100.0 37 ..................................... CTAAAGCTAGAAATATCTATCGGATGATATATAATAT 857650 37 100.0 36 ..................................... TTTTTTAAGTACTTTTAAATCCTTATCTTTACGCAG 857577 37 100.0 37 ..................................... GTCTACTGTTTGTACTTTTTGTTTAGTTATTTTTATT 857503 37 100.0 36 ..................................... CATGCATATTGTAATGTTTTAGACACGGTGTCTAAT 857430 37 100.0 36 ..................................... TTATTAACTATAATTGCCATATAATCTCTCCTTATT 857357 37 100.0 38 ..................................... ATGGCAATGGGGGGAGTAATGAAGCGATTGGTTGGAAA 857282 37 100.0 36 ..................................... TATATTTTGCTATCAATTAATTGATAGCTTTTTTTA 857209 37 100.0 35 ..................................... ATCTATTGTCTTTACTTTTAATTTCTCTATATTGA 857137 37 100.0 37 ..................................... TTACAACATAACAATTGAAATATACCCCGTTTTGTGT 857063 37 100.0 37 ..................................... TTTTTAAAAACGGACTGATTATAATAACAGTCATAAT 856989 37 100.0 33 ..................................... ACTTCTTGTCCTTTTAAATATTCCTGCGTAGAT 856919 37 100.0 37 ..................................... TATATTTCTTGGTCTATATCAATCACTCTTGTGATGA 856845 37 100.0 36 ..................................... CTAGATTTAGAGACCATGTATCATGGTCTGAATCTT 856772 37 100.0 36 ..................................... CATCAATATATAATTCCTCCATTTCCGCATTATGAT 856699 37 100.0 35 ..................................... ACATCTTCTTCTTCGTTATGATAATCTTGGAAAGA 856627 37 100.0 37 ..................................... CTTTGACACGGGGTCGAGGTCTTTTTTGTTTTTTTCG 856553 37 100.0 36 ..................................... TGTATTCACAGTCTTTAATTCTTTTTTGGAATACAT 856480 37 100.0 35 ..................................... TAATTTTTTTGTTAATGATAAATCCACTTCGTACT 856408 37 100.0 35 ..................................... GTCTTCTTTTTTTTCCAGTTGTTCAAACACCAAAA 856336 37 100.0 36 ..................................... GCTTCTTTGTAATGTTTTAGACACGGGGTCTTCGAT 856263 37 100.0 36 ..................................... TTGTAATAATGTTACAGCTTCTCTCTAATGTTTTAG 856190 37 100.0 37 ..................................... ACTATTATTTATATAGACACCGATACATTTTATGAAG 856116 37 100.0 37 ..................................... TCCTTACAATTGAAATCTTGCAAAGATAGTCCGTTAT 856042 37 100.0 34 ..................................... CTATTTTTCCTTTCATAAATTCTTGCACGTCTAG 855971 37 100.0 36 ..................................... TTTTAAGACATCAATTAAAATGCTATTAGTGTTAAA 855898 37 100.0 36 ..................................... AACATTAGCTAAAAATTCATCAGTCGCCTTAAAAGT 855825 37 100.0 37 ..................................... TTTCATTACCACCATCAACAACTGTATACCTACCCTT 855751 37 100.0 34 ..................................... ATTCATAAGTCAATCAATTATTTAACAACTTATT 855680 37 100.0 37 ..................................... CTTTTTGCTAAAAACTCAATTGCTTCTTCAGTTTTTG 855606 37 100.0 36 ..................................... AACATTCCTTTGCTTAAAAACTTGCAAATTAACTCT 855533 37 100.0 34 ..................................... ATTTTTTCTTGATATTTATACATTTTTCTACTCC 855462 37 100.0 35 ..................................... TTACTTGTTCAAATACGATAATTTTACATTTTACC 855390 37 100.0 36 ..................................... GACCTTTTTTGGGGTGTTTAAACCCCCTTTGGTCTA 855317 37 100.0 35 ..................................... TATTTTAGGTTTTTTCTGTATTTTAACATTGATTT 855245 37 100.0 35 ..................................... CCTCGGTAATGCATATTACGAGTAATTCAAATATT 855173 37 100.0 35 ..................................... TCTTATTAACATTTATTATCACCTCAATTATCCGT 855101 37 100.0 35 ..................................... CTGTAGATAAATATATCTATTAATAGTGTCTCTTT 855029 37 100.0 37 ..................................... TAAAATACTGATTTTTCAAGTACTGATACACATTACC 854955 37 100.0 36 ..................................... TTTGATTCGTAAACGCCGTATTCGTCCTTTTTTGGG 854882 37 100.0 35 ..................................... GATGCTTTAATTCTCTCCTTCTTCCATTTTGAAGA 854810 37 100.0 34 ..................................... AAAAAACCATTAACATTAAAAATTTGTTCGTCCT 854739 37 100.0 37 ..................................... TTCAAAATTTCCTTTAATTCATTTATTTCATCTATAA 854665 37 100.0 35 ..................................... CTAATAAATTTTATTTTCTCCATTTTAAACACCTT 854593 37 100.0 35 ..................................... CTTCCTTGTTTATTTTTTCTTGTTCATAAATAATA 854521 37 100.0 35 ..................................... AACCTTAAAAGACCAGTTTATAACAATGTAGCTAT 854449 37 97.3 34 ..................G.................. TTTCTTCCATATGTAACTTTTTTAAAGGCATATC 854378 37 100.0 35 ..................................... GGCAATCCGTATGTAACTTCATTATTAACTGCATA 854306 37 100.0 35 ..................................... ATTTTCAGGTCATTATCTGCATCGAGATGTGATTC 854234 37 100.0 35 ..................................... TTCCGTCTATGTCGTTGTAATAGACATATACTGGT 854162 37 100.0 35 ..................................... GCCATATTCTTCATCTGATATTTCGTTTAGGCTAT 854090 37 100.0 36 ..................................... TTGGATAGCTTTTTAATTTCATTTTATCTTTTGCTT 854017 37 97.3 38 ................................A.... AGGACCTTTATGAGTTTACATTGATCCTCTTTGTTCAT 853942 37 78.4 0 ........................C...AC..AAATG | ========== ====== ====== ====== ===================================== ======================================= ================== 108 37 99.7 36 ATTGCAGAAAACCATCTACTAAAATAAGGATTGTGAC # Left flank : GATGAAGGTCAAATCAGGATTCAAGATAAAGCTCGTAAACTATTAATAGCTAAAATAATGGATAAACTAAACTCTAAAATTAACTTTAATGATAAAAAAATGAGTTATGAAGATATAATTCTTTATCAGGGCAGATTACTTGGAAAATATTTGACAGGAGAAAAGAAAAATTATGTTGGATTTTCAAGAAGGTGGTGAAGATTGCCTAATTTTTCTTAAAATAATATTTTTTTATAAATAATTAATACTTTTTATTTTTTAAATAAATCAGTATTTTAGCTAGTTTTCTTTAGATTATTTTTATCATGTGGTTTTGATGATTATACTCTTATATTATATTAATTATTGCTTTAATTTTAGCTAGTTTTAATAGAAAAGTATTTAAATAATTTGTGCAATAATTTATATATAGAGGTTGGGTGAAGTAAAGTTCACAGAAACTGTCACTAAATACAAGTTTTTTGCATAAAAAAGTGAAATTTTGAGAAATTTTCGCGGCT # Right flank : AGTTTTTATCATGATTAATATTTCCAGTTGATTTTTATAAAGTGAATTCTAAAAAGATTATTAACAAATTGTTGCAGTGTTATATATGAATGTTGAAAGTTTGCAAATCATTTCTAAATTTATGGATGATTATGAATATGAAAAAGCTATGGAATTGTGTGATGAGCTTTTAAAAAAAGATAATGATAACAGCCATCTCTGGGCTTTAAAAGGATGCTGTTTAAATCATTTTGAAAAATATGTTGAAGCAATGGAGTGTTACAACAGATCCTTAAGTGTGGATGATGAAAACCCTTTTATCTGGTTTCATGTGGGTAAAATTTTAATGGAATATGATTTATTTGATGATGCTCTGGAGTGCTTTAACAATTCATTGGAAATTAATCCTGCTGATGATATGGCACTGTATTCAAAAGGTGAGTGCTTAATGTTTAAAAAATCATATGCTGAAGCAATTACCTGTTTTGATTTGGCTATTGGATTTAATCCCAAATATTTGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGAAAACCATCTACTAAAATAAGGATTGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //