Array 1 13420-13059 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NXFX01000006.1 Mammaliicoccus sciuri strain i1 NODE_6_length_55352_cov_181.301, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=================================	=================================	==================
     13419	    33	  78.8	    33	AA........A..A.G..A..G...........	TACATTTTTTGGGTTTAAATGTAAATTCTTCGT	
     13353	    33	 100.0	    33	.................................	TGTAGTAGAGCATTAAACAAGTTGCTGGTGGGC	
     13287	    33	  93.9	    33	...............GA................	TATTCTTATAAAATAATGTTGCCCCAGCTTCCA	
     13221	    33	  93.9	    33	................A.............T..	AACTACATAGTATCCATGCCCGCACATACCATA	
     13155	    33	  87.9	    31	......A......A.............G.A...	TATAAAATGTTTATGGCCCTAGACAAGCGTT  	
     13091	    33	  66.7	     0	T...............A...ATT.A..GCAAG.	|                                	
==========	======	======	======	=================================	=================================	==================
         6	    33	  86.9	    33	GTTTTAGTACTCTGTAGTTTTAGGTATAAGGTA	                                 	       

# Left flank :   AAAGGTATGCATAACGAGAGTGGGGATTCGAAAGAACCACGTTTTAGTACGCTGTAGTTTTGGGTATATGTTTGAACTCAAAAATTGTCTCCAAAGTAGACAATATGTTATTATGTAAATGTAATTAAGAGCAATAAAAAAGAGGCAACATGCGCGAACATGTTACCTCTCCAGGGCCCGTTATACAGACGGTGGCTTTTAGTAAAATAGTAAATCTAACCATTCTACCTACTTCGCCAAAAGCTGGGAATGGTTATTTTTTTTGATCAATATCTCTAATTAATACTAAGCCAATGATTGTAAGAACAACCATAAGCATTTCATAATCAGTCATGCTTCTCCTTTCTTGAAAAGAAGTTGAAGCCATATATAAATCATAGGCATCACCTCACTTCAATGAGATTAGCCACCTCTATCCAACTTGCCCTGCTCAATATTATAACATCTATAGTACCTTAAGTTTTAAGAATATATTATTATCCGCTTCAAAAGCTTAAAGC
# Right flank :  AAGCATATAGCTTAGTTTGACTAAGGTTAAAATATATATTATTGTTTAAATACAGTACTATTATGTATTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGGCAAAATGCCGTGTTTATCTCGTCAACTTGTTGGCGAGATTTTTTTATATACATAATTAAAATCTCATGTAACTAGGAGTGTTCATATGAAAAGGCATTATATCTTAGGGTTAGATATCGGCATAACATCAGTGGGTTATGGCATTATTGATTATGAAACGAGAGATGTCATAGATGCAGGCGTACGTTTGTTTAAAGAGGCAAATGTTGAAAACAATGAAGGACGACGATCAAAAAGAGGTGCTAGAAGACTTAAGAGACGTCGTAGACATAGATTACAAAGGGTAAAGAAACTTTTATTTGATTATAATTTGTTGACGGATGATAGTGAGCTAAGTGACATCAACCCTTACGAAGCACGCGTAAAGGGATTAAGTCGAAAATTAAGTGAAG

# Questionable array : NO	 Score: 3.49
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.42, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAGTTTTAGGTATAAGGTA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.83%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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