Array 1 24-236 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIDK010001031.1 Algoriphagus aestuarii strain KCTC 42199 1040, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 24 29 100.0 32 ............................. CGGCAGCACGCGCGCGACCAGCGCGCCCAGCG 85 29 100.0 33 ............................. CCCCCCCGTGGCGGGGGGGGTGCGCATCACACA 147 29 100.0 32 ............................. ACAGGACGCACTCAGACACGCTCAGACGCACC 208 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 4 29 100.0 33 GTGAGCCCCACGCACGTGGGGATGGACCG # Left flank : GGTGCTTCTTTCCGTGCGATCAAG # Right flank : GACGTCCAGGTCCGATCGGTACTCACTCCGCTGTGAGCCCCACGCACGTG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCACGCACGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 328-181 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIDK010000599.1 Algoriphagus aestuarii strain KCTC 42199 601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 327 25 86.2 32 ----......................... TCCACGGAAAATGTGGGGGGCCTGGATCAGCG 270 29 100.0 32 ............................. CCCAAACCGGAACCCAGACCGGCACAACACAT 209 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 GTGAGCCCCACGCACGTGGGGATGGACCG # Left flank : | # Right flank : GTGGGTGACCAGTCGCTGGGGCGTCCCTAAGTGCTGGTCTAATTTTGCTGTTGGACGAATTGCTAAGAAGGCGAAGGCTGGCATGCAGAAACACGATGAGATATGGATCCGCTATTTCAAGTCCCAAGGCTAACCCAATGCTGTGGGGCTGGCAGTAGGAATGGAGGGCGCCGCCTACGCC # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCACGCACGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //