Array 1 30848-33706 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEFDC010000019.1 Capnocytophaga periodontitidis strain 051621 19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 30848 46 97.8 30 ................................C............. GTATTAGTACGGAATTTGCAGAGATAAGGC 30924 46 97.8 30 ................................C............. AATACGTGTAATAAAGAAAAAGAACGAATC 31000 46 97.8 30 ................................C............. AGCTGGGGACGAGATGATTGTAAAATTCAT 31076 46 97.8 30 ................................C............. AATACGTGTAATAAAGAAAAAGAACGAATC 31152 46 97.8 30 ................................C............. AATTACCTTGGTAGCTATAGGCACACGAGC 31228 46 97.8 30 ................................C............. GACCCTAATTTTGATTTGAACAAGGCTGCC 31304 46 97.8 30 ................................C............. ATAGTGAAACCAATATACCTTCCTTCTATA 31380 46 97.8 30 ................................C............. ATTACAACGATTTTTAAGTGCAATCCGCAC 31456 46 97.8 30 ................................C............. GGACGAGGATTTAGAGCGCCAACGACTACA 31532 46 97.8 30 ................................C............. GTGTGCTAACCAATAACACGAACGAACTGA 31608 46 97.8 30 ................................C............. CTACCCTGCCAAAGACTGCAGAGGCAACAA 31684 46 97.8 30 ................................C............. TAAGTACTCTTCCTCCGCTCTTAGATTGTT 31760 46 100.0 30 .............................................. CTAACCTATCAGCAAAAGACTTTCAAACTA 31836 46 100.0 30 .............................................. TGTTAGCTGTCAGATAATTTTTAACTACCT 31912 46 100.0 30 .............................................. TTTATATTATATATTATTATATTATAAATA 31988 46 100.0 30 .............................................. ATAATCTTTCATTGATATAATCAAAATTAT 32064 46 100.0 30 .............................................. TATCCTTGCCGATGAAGCAATAAATTACAA 32140 46 100.0 30 .............................................. AAACAAAAGCAGTACCAACGCTCCAAAATT 32216 46 100.0 30 .............................................. TCATTTATTTTTTTGTCCTCGTGCCTGCGG 32292 46 100.0 30 .............................................. CAACGAAACAATGAACAAACAACAAGCCCT 32368 46 100.0 30 .............................................. CAAACCCTATTGGACGAAGCGGTTTTACTC 32444 46 100.0 30 .............................................. ATTTTAACGACTGTAAGACAATAGAAGAAG 32520 46 100.0 30 .............................................. TCTGAGCATATGGTTCAACTCCCACTTTAT 32596 46 100.0 30 .............................................. ACCTATCTGAGCCTTCTTACCTCCCTTTTC 32672 46 100.0 30 .............................................. CAACTCATCTGTTTCTTCTTCTTTCAAGTC 32748 46 100.0 30 .............................................. GCGCTTTCATAATGGCGGTTATATAACTGC 32824 46 100.0 31 .............................................. GGGGTAGAGATAGCTGTAGAAATTCGCTCAC 32901 46 100.0 30 .............................................. TTTTCTAATTTTCATTAGTTCTTATTGGCT 32977 46 100.0 30 .............................................. TATATTATTATTATTATAAATAAAAAATAT 33053 46 100.0 30 .............................................. GCACCGAAACCCTGCAACAACTCATCGAAA 33129 46 100.0 30 .............................................. TGCTCGACAAAACGGGACTTTTCAACTATC 33205 46 100.0 30 .............................................. TTTGGAACATATTTGGAGACCAGTTTTCTG 33281 46 100.0 30 .............................................. GACAATGGTAATATTATTCGTGATAGTTTA 33357 46 100.0 30 .............................................. TAAAGGAAATTTATTGAGTGATGCTTTTTG 33433 46 100.0 30 .............................................. CGTTACAAAAGACGCAACAACAAAGCAGTT 33509 46 100.0 30 .............................................. GTCAAAGTCCGAAACTTCTATGAGCGAACT 33585 46 100.0 30 .............................................. GATGATTTGATCATAATCAGTTCCTTTCTT 33661 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 38 46 99.3 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Left flank : AACAGTCGATATGTTGATGGACGGTTACAAGAAGTACGGCGTTGGATGGCTGCAACAAACAATGGACGGGCTCTTGGCGGCGAGAGATTCAAGACAGTTTATGAATTCTTTAACCGAAGAACAAGCGAAAGAGTACGCGCACAAGCAGAGGGAAAGGCTGATGAATACATAATTGATTGTCAGCGAGAGGAACAGCGGAGTGTCATTGAATTTGCTAAACAAAACAACTTGTGGTATAGTCATTCAGATGTTGAACGATTAATTGATGGGTGTGAATGTGTAGGTTTAGGTCAAGAGTCAGTCGTTCTTCTTTTACGAGATAAAACGACTGTATTGAAGCAAATGACTGGTCGTAATTTTGACCACTTAAATTATCCAATGGAAGCAGTTGTGCGTAATATAGCTATGTATAACGAATTGTTTCCAAACTCATATCTTCATTTAGAAGGTATATCAACAATCGATAGAGGAGAAGGTGAACAAGTATGTTTGTTGGTGAC # Right flank : CCTCAATCTTTTAAAGGTTTTAGTATCAATCAGTTTTACTGAAAAACAGTACTGAAAAACCTCCTCTTTTACCTTATAAACAAAGGCTAAAGAGGAGGTTTTCTCTTTCCTATTCTTCTTAAAAAAGCTCTAATTGCACATAAGTTTCGGGAGCTGCTGTTTCTCTCTGACAGTAAAAGAACTCCATATCGCCAAACTGCTTATCAGTTAAGCACATAATAGCTATATTGCCATACTGAGGTAAGTTTTGTTTTACGCGATTGATATGCACTTGGGCATTCTCTCTACTAGGGCAATGCCTTATGTACATCGAAAACTGAAAGAGCGTAAAACCGTCCTTTATGAGTTTATCACGAAAGTTCTGTGCTTCTTTACGCATCTTTTTCGTCTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTGTATCGGTCGGCTATAATCATAATTCAGGATAGGCTATGAGTCGCTTTTCACCCGTATAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Alternate repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //