Array 1 50345-45678 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKDE01000024.1 Acinetobacter baumannii strain TUM16643 sequence024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 50344 29 100.0 31 ............................. CTTTGAAAGTACCGTCCCACATCCCAACATA 50284 29 96.6 31 ............................A AACCGACAAAACAAGGTGAATAATCTAGTCC 50224 29 96.6 31 ............................A ATACTGCAAACATTTTTCTAGATGGTGAATA 50164 29 96.6 31 ............................A ACATTCTCCGCCCAGCAAATAATTGCTTTGA 50104 29 96.6 31 ............................G TAATCGAATTAGTTGCTCATAATGTCGAAAG 50044 29 100.0 31 ............................. TCTGGGTTCGGCTCTAATTCCGAAAGCTCTA 49984 29 96.6 31 ............................G ATTGTTCTGCCTTGCCGGGAAGCTTCATTAA 49924 29 96.6 31 ............................C AATTTTCTTGCGCAGCTTCTTCTGCATTAGC 49864 29 100.0 31 ............................. CTAAGGTGCTGCTTGAAGTGCTGAATAGGTT 49804 29 96.6 31 ............................A ATTAAGCAAGATATTCAAAATACGAAAGATC 49744 29 96.6 31 ............................A CTAGATCCAGTGTTAATCTGCCAAGTGAAGT 49684 29 96.6 31 ............................A GAGTCTGCCCCGATCAATCCTTCAGATCCGA 49624 29 96.6 31 ............................G AAAGAGCGATTTCTTGTGTGGGCATCAATTC 49564 29 100.0 31 ............................. AACCCTATATGCTTATGAGCCACCGATTTAA 49504 29 96.6 31 ............................A CAAGAAATAGCAGCAGGCCACCGCATTGATA 49444 29 100.0 31 ............................. TCTGCGGCTGCTTTGGAGTGGTTATTGTTCA 49384 29 96.6 31 ............................A AACATTTTACACAGATCAAGCAGCGGGATTT 49324 29 100.0 31 ............................. ACGACAAAAAGGCTAAAAGATACGTTATTAA 49264 29 96.6 31 ............................A GTAGTTAGCAACTCATGGAAGGTTTCCATAC 49204 29 96.6 31 ............................A AACTCAATAGCAGTGGCGTAAGGCGCATTCG 49144 29 100.0 31 ............................. TGTTGTGTTGAAGCGTAATGATGTGAAGGAT 49084 29 100.0 31 ............................. TTATGGTCATCAAAGAATGCTTTGATTTGCA 49024 29 96.6 31 ............................C CGAAAAGCACGCTTTTCATGTTCAGTGTGCC 48964 29 100.0 31 ............................. TCATCCAAACTTTAAGCGGCGTATGAGTAGA 48904 29 100.0 30 ............................. GTCCTTAGCGGCAGGTTTTTTATGCCTGAA 48845 29 96.6 31 ............................A ATGGAGCACGATAACCACAAGGTTCATAAAC 48785 29 100.0 31 ............................. GAATGTAGAGACGCAAGGAGGGAAGTTAAGG 48725 29 100.0 31 ............................. CAACATTGTAGGCGCGACTATTGGCTTCTTT 48665 29 96.6 31 ............................A TCATCACTTGATTTCTTGACCGTTTCTACAA 48605 29 96.6 31 ............................A AGCACCCCCGTTTGGACAATGAACAGCAAAG 48545 29 96.6 31 ............................C ACAGGTGTGCCAAATTGAATTGCATCATAAT 48485 29 96.6 31 ............................G ATAGCGGTGCGTAACGTTCCCGCCACTGCAC 48425 29 100.0 31 ............................. ACCGGAAGCGCTACCGTTCATTGATGACGAA 48365 29 96.6 31 ............................G ATAGCGGTGCGTAACGTTCCCGCCACTGCAC 48305 29 100.0 31 ............................. AATAGCACACGTGTTGAAGCTGGAGATATAT 48245 29 96.6 31 ............................G TGTCGTCACGCTCAACAGAAACGTAGTCAGC 48185 29 100.0 31 ............................. GCCTCCTCTTTTGCGATTAACTCTTGAATTT 48125 29 96.6 31 ............................A TTAGTGTGCTTGGTGTTACAACATCATTTTC 48065 29 100.0 31 ............................. TTCTCATATAACAGGGTAGATGCGGTTGCAC 48005 29 96.6 31 ............................A ATAAAACGCCTATTTAGATTGGCTGCGGCCT 47945 29 100.0 31 ............................. TCAATCATTGCTGACTGAACAGACCATGTAC 47885 29 100.0 31 ............................. ATAGCTAAACAATTGTGATGTTTAGATATAA 47825 29 96.6 31 ............................A TCAAATTGCCAGCAGCAGTTCCAACATATCG 47765 29 96.6 31 ............................A AATCACAATTGAAACGAATGGTAGAGCACTT 47705 29 96.6 31 ............................G TAATGATCATATCTAGCGTATAGGCCATTTC 47645 29 100.0 31 ............................. TCTTCATCAACCACATTGATTGGCTCTAAAC 47585 29 96.6 31 ............................A GTTACTTGCTTGATAATGTAATGGCACAACG 47525 29 100.0 31 ............................. CACTTCAAAATAGCGTCTCCTCAATTAACGA 47465 29 96.6 31 ............................A AAAGCGCATACGGCAAGTACAACGGTTTCGA 47405 29 100.0 31 ............................. TTGACTTACTTCAGTTCTCTGTTGAAGATGT 47345 29 96.6 31 ............................A GAACACCTAAGCCATGAAGTACACCAAGTAA 47285 29 96.6 31 ............................C ACGCATGTCGGAAGCTCGGCTTTTTATCTAC 47225 29 100.0 31 ............................. TTAACTCCAGATGCTACCAATAAGCCAGTAC 47165 29 93.1 31 ..........A.................A CATGGGAGCTTTCATTCATATATGTCATTAG 47105 29 100.0 50 ............................. GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGGATTTGGCGCTC 47026 29 89.7 31 ....G.......CC............... CACATCACTGATGCACAACAACTATTTTCTG 46966 29 82.8 31 ...GC.......CC..............A CAGGGGTCAAGTTCAGAAGATTTACGTTACA 46906 29 82.8 31 ...GC.......CC..............G TCATAGTCCTTCTGAACACCAAATGTATAAG 46846 29 82.8 31 ...TC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 46786 29 93.1 31 ....C.......G................ TAAATGCTCAACTACTTCTGTAGCTAATGGA 46726 29 89.7 31 ...GC........C............... CTCAACTCATTGATTTTTTCTTCTCTTGCCA 46666 29 89.7 31 ...GC.......................G TGTTTTTCGATATGCTTCGAAAGGTCATCCT 46606 29 82.8 31 ...TC.....A.CC............... GATGGTTCAGCATATATAGCTAGACGTACAC 46546 29 82.8 31 ...GC......TG...............A TCACCAAACACAACCAAAGGTGAACGGGTAT 46486 29 86.2 31 ...GC.......CC............... TATCTGCCATACCCGACTGCTTTGTTCCTAA 46426 29 89.7 31 ...GC.......................A TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 46366 29 89.7 31 ...GC......T................. TCAAATGATTTAATGAGCTTGTAGCCATTTT 46306 29 86.2 31 ...GC.......T...............A CGTCTTCTAATGATGGACTTTAATCCAATAT 46246 29 79.3 30 A..GA.......TC..............A TCTCACTGAAGATATGACCATCACTTTCTT 46187 29 82.8 31 CG..G.......CC............... TTATAACCACCAGTTAAAGTATTGACTAAAA C [46182] 46126 29 72.4 31 ...GC.G...A..C.AT...........A CAATCGGGGTCGTGGTCAAAAAGATTATCAG 46066 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 46006 29 79.3 31 ...GC....T..TC..............A TTAAAGCATTTTCATATGAGCCTTCCTCATT 45946 29 82.8 31 ...TA......TCC............... TCGGATCAGTCCAGTCATCATCCTCGTCAAT 45886 29 86.2 31 T..GA.......G................ ATCATTGCGCGACAGAACGCATCAATTAATG 45826 29 82.8 31 ...GC.......CC..............A GATCTATGCAAGATTTATTGGTCTACATTAG 45766 29 89.7 30 ...TG.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 45707 29 86.2 0 .G..G...................AT... | C [45702] ========== ====== ====== ====== ============================= ================================================== ================== 78 29 94.2 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : TTTTTTTGCAATGCATTTGCTGCAATATTTTGCCATTGGAAACGTGGGTGAGTTGTTGGCTGACAAATATATTCAACTGTTTGTTCAGATAGGCCAGATAAACTCAAATCAGTCATCATTTGAACTGCAATGCGTGAAGCCCGATCTCCGACTTGGTGTAAATGCCATTCTAGTGGTTGATCTTGTAATTTGGCTTTTTTGTCTTGGTCTATAGTTTTAAGCTTTGTATTTGCAAATAACGATACATTTTCAGGTTTTTGCAAAGAATATTGTTGTGCTGAGACAATATGATCGGCATGAATCAGAGCTGCTCGCGAATGCAGTGCTAAAGCTTTCCAATATAAAAGCTGGTCTGTTTTTTGTTTTGGTATTAATGCAGTTAAACGCTGCATACGTTTTTGATGACTTTTAAAAATAGAGTCTGGCAATTCACCTGCACAACTCATTTGTTCACGACTTGGAACTAATGTACGGACATGATTTTCATAGTGGAGCTGGAC # Right flank : TTGAATCTTAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACAT # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [80-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //