Array 1 204352-204869 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NRNJ01000005.1 Cronobacter malonaticus strain 199G contig5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    204352	    29	 100.0	    32	.............................	ATATATCAGGATTCACAACTACTGGCTGAATA	
    204413	    29	 100.0	    32	.............................	GTAGAACCGGGTGCCGCGCAGCCCGGCGACGT	
    204474	    29	 100.0	    32	.............................	TGGATATCACCCGGCAATGGCCGGGGAACAGC	
    204535	    29	 100.0	    32	.............................	CGCCCCTCTCGGGGCGCGCTCCTGTTAGTCTT	
    204596	    29	 100.0	    32	.............................	TCCACGAAACAGCAGATCGCCGACGATATCCG	
    204657	    29	 100.0	    32	.............................	CTTCGGCAACCGGATCGGCTTTGCCTCCATAT	
    204718	    29	 100.0	    32	.............................	ATGGTCGCGCAAAGCGCCATGCGGCCTACACC	
    204779	    29	 100.0	    32	.............................	CGGATTGCATCAGATAACCGACTCCATGAATC	
    204840	    29	  93.1	     0	...........TT................	|                               	G [204857]
==========	======	======	======	=============================	================================	==================
         9	    29	  99.2	    32	CTGTTCCCCGCGCGAGCGGGGATAAACCG	                                	       

# Left flank :   ACGAAAGCTTCAAATGGATGATGGCGAACAACATCGCGTTTATCGTCGCCAACATCAATATCAACTACCGGCGGCCCGCCGTGCTTGGCGATCTGCTGACTGTCACCAGCCATGTCAAACAGCTTAACGGTAAAAGCGGAGTGTTAAGCCAGGTCATTACGCTGGAGCCGGAAGGCGAGGTGGTCGCCGATGCGCTTATCACTTTTGTGTGTATCGATCTGAAAACACAAAAAGCCTTACCGATTGAAGGCGAACTGCGCGAAAAGCTGGAAAAAATCACAGGGTAAATTCTGCAAAAGTGGCGCTTGTGCCGACAATCATGGACTTATCACCGCTCAGGGTGAACAATCCGGTAGATGTTAACAGCCCACAAGCGTCGCGAAAAAACACCTTCAAAATCAACAGGGCAGCCGTTCTTTAACAAGATGGGTTGTTAAGAAAATGTTGGTAGGATGTGGGTGGCGAAAAAATCGCAATAAGTACAAGTGCTTAACGTTAGT
# Right flank :  GCCCAGGTTCTTCACGCCTGTCAATCGCCTCCCCTTTTCCCGCCACATTCTTCAGCAACGTTTATACTTCAAAGCCCTTGTTAAATTTTGAACACTGCGCAACGAAGGAGAGGTTATGCGAGTACACCATCTCAACTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTACGATGGCTTCAGTAAAGGGCTGCAGGCGCATCTCATCTGCCACTGCCTGCTGATTGAAACCGACCATCACGGGCTGGTGCTGGTGGATACCGGCTTTGGCTGTGACGATATGCGCCATCCGGGCCGCCGTTTACCGCTCTTTTTCCGGGCGCTGAACAATATCCAGTACCGGGAATCATTAACGGCGCTGCACCATATTAACGCGCTCGGCTTTAAGCCGGAGGATGTACGGCACATTGTACTCACGCATCTGGATTTCGATCACGCGGGCGGGCTGAGCGATTTCCCGCAGGCGCAGGTGCATCTGATGCAGCGGGAAATGACCGCCG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGTTCCCCGCGCGAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [60.0-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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