Array 1 1963485-1967612 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079950.1 Macrococcus caseolyticus strain 19Msa0287 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1963485 36 86.1 30 A.A.....C...G.........T............. GGTACTGCAGCATTAGGACTATATGGAGTT GGAA [1963492] 1963555 36 100.0 30 .................................... GATGATAAAAAGCGTGGTCACAAACTAATA 1963621 36 100.0 30 .................................... CCGTCATCAAGCCACGTCGTGAATAAGGCT 1963687 36 100.0 29 .................................... CAGACGTTTAAAGCATACGCAGTCAGAGG 1963752 36 100.0 30 .................................... ATACTCGTCATCTTATCTCCAACAGCAGAA 1963818 36 100.0 30 .................................... TGCGAATGTAGTTATTTAATTAAGTAACTT 1963884 36 100.0 30 .................................... ACTAACTGCGATAAATTGGCAGCTTTTTGT 1963950 36 100.0 30 .................................... GAATATGTACGAATACGGTTTCGGGTGGAA 1964016 36 100.0 30 .................................... AAGGAGGTTAAAAAATGAATAAATACAAAA 1964082 36 100.0 30 .................................... TTAAGCTATAGAGATTTCTCACGATCTAAA 1964148 36 100.0 30 .................................... TAACGACACCGAATGTAAAAGCTGAAGATC 1964214 36 100.0 30 .................................... GATGTTCAGGGCGCTTTTTTAACTTATATT 1964280 36 100.0 30 .................................... CCTAAAATAAACATAGACTACACCTCCTTA 1964346 36 100.0 30 .................................... CGATTAGTCCAATCTTGATAAAAACTTACA 1964412 36 100.0 30 .................................... TCACACGTATCAACTCACGTAAGAATAAGT 1964478 36 100.0 30 .................................... GTCTCGCTACGTCTACACCACTTGAAATAT 1964544 36 100.0 30 .................................... AATAGTTCTGATAGATATGCTTTGATTAGA 1964610 36 100.0 30 .................................... TTGTTAGATGGCGAATACGTTCTGCACCAA 1964676 36 100.0 30 .................................... TTCTGATTCTTTTAAGTAGATGATCATGTG 1964742 36 100.0 30 .................................... GAACCTCTTAATCTTGTTTATTAATAAGTT 1964808 36 100.0 30 .................................... GAAACCTTTAGATTTAACATTTGGATTGTA 1964874 36 100.0 30 .................................... AATGAATTAGGTGGATTTGTCATCGCTAAC 1964940 36 100.0 30 .................................... GCACTTTGTATTGAAGATAATTCAATATAG 1965006 36 100.0 30 .................................... ATCGCATAACCTTGTGAAGTCCATGCACCA 1965072 36 100.0 31 .................................... ACCATGATTGTGCTGTTTTGCTACTGTACCG 1965139 36 100.0 30 .................................... CCAGTCGCAAAGTCAGGAACTAAATAAAAG 1965205 36 100.0 30 .................................... CCAGTCGCAAAGTCAGGAACTAAATAAAAG 1965271 36 100.0 30 .................................... ATCATATCCATCATCTTGCTGTTTTGCTCT 1965337 36 100.0 30 .................................... ATCATATCCATCATCTTGCTGTTTTGCTCT 1965403 36 100.0 30 .................................... CTTGAGAATGCCTGATACTTCATGTTCTTT 1965469 36 100.0 30 .................................... GCGTCTTCCGAACTTACGAATAGAAATACG 1965535 36 100.0 30 .................................... GTGCGGTTACGGTAGGCGTAGTTGCTGGTG 1965601 36 100.0 30 .................................... GTTGCTCTTTAGTTGCTAGTACGGCCCACG 1965667 36 100.0 30 .................................... GTTCGTGCGGACATTCCCCCTGACCTGAGC 1965733 36 100.0 30 .................................... TACCAACAAAAACTAATGTATATTTTTTAG 1965799 36 100.0 30 .................................... CCACAAATAGATTATGGTGTTCAGATTAGC 1965865 36 100.0 30 .................................... AACATTAAGTGATTTATTTTTAATTGGATC 1965931 36 100.0 29 .................................... AAATGATTACGATGTTGTTTACCCTAAAG 1965996 36 100.0 31 .................................... GGTGCGATGAGACCTGTGGGCGTAGTGATTC 1966063 36 100.0 30 .................................... TCCATTTTTTCGTTGTTATCTTCAATGTCT 1966129 36 100.0 30 .................................... GTGACATCTCTCCACATTTCGAGCCATTCT 1966195 36 100.0 29 .................................... TGTGGGAATGGTTACTAATGTTTCAGGTG 1966260 36 100.0 30 .................................... TAAATCTACCTCCTCGCCATCTCTTTTTTT 1966326 36 100.0 30 .................................... TCTACAATAGATTTTTCTAACATCTTATAA 1966392 36 100.0 30 .................................... AGTAAGCCCGGTGGTATTTTCTCTTAACAG 1966458 36 100.0 30 .................................... AATAAATTCAGAGTTCGAAGTGATGTTGAC 1966524 36 100.0 30 .................................... CTAACTGACATGACATATCCTTTTTTAGCG 1966590 36 100.0 30 .................................... CATGGAAAAAGCGTTAAAACTAGATAAAGA 1966656 36 100.0 30 .................................... AATCGCCCTGGATTTATCGCCCATGTAACT 1966722 36 100.0 30 .................................... CCTTCGCTATTGTGATGGTTGATAACTAAC 1966788 36 100.0 30 .................................... AAGATTTGTCGTTTACTTGGATCAGTCACA 1966854 36 100.0 29 .................................... TTTACCAGTATTTTTTACGCCATTGCCTA 1966919 36 100.0 30 .................................... GCGCTGTTCTTGTTTTTCCTGTCCCTTGTT 1966985 36 100.0 30 .................................... GTACATCATATCACCTCGCTATTATCAATT 1967051 36 100.0 30 .................................... CAGCATACATGTGCTTACAATCATTCAACT 1967117 36 100.0 29 .................................... ATTATTTTCATCTTGTCGGTAATATTCAA 1967182 36 100.0 30 .................................... GGTATCGCAATCATGTATTCAGTATCGACG 1967248 36 100.0 31 .................................... ATTCCTCTTTACTTGTTCCTATCCATTCATT 1967315 36 100.0 29 .................................... TTGAAGATTTCATCAGCGATTGCATCTAT 1967380 36 100.0 30 .................................... GTATGACGAGAAAGACTTCTTACCTTACTT 1967446 36 100.0 30 .................................... AATCGCTCCTGAATATCTTTTGGAGAAACT 1967512 36 100.0 29 .................................... GCTGCTATTCCATGTAAATAAAACTCTCT 1967577 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 63 36 99.8 30 GTTTCACTTCATTCTAAAAGATCATAGTTCTAAAAC # Left flank : TCGATGACTTCCTAAAGGTCTGTGCTACAGGAGAAATCGAGTACGGAGAAGACTTTGTAAAGCTGAAAGACGAGACACATAGACGTGATTTGTTAAAGCATAACATACTACAGATCGTCGCATACATAGATAATATGCCTGCCGGTAAGATAGAAGCGATTATAGAAGATGAGACAGTAGAAATCGATGACTTCTACGTGATTGAAACGTATCGTAAACGTGGTATCGGGAGTCGCCTGCAAGAAGCGGTGTATGACTTGGCACATGGCAAGCAGGTATTCCTTATTGCAGATGGAAACGATACCGCACGCGATATGTATCAGCGACAAGGTTATGAAAAGATAGCTGAACGCTATGAACTGTTGCTGGCGCCGCATTCAAGTGATTAAAATTGATTCAGTAAAACTTGAAATCATATACTACGTAAAAAGACGCAGTCCCCAGCGTCTTTTACTTCTCGTTTTGTTTCAACCTTCTAACTGCGTTATATACTAATACTC # Right flank : CCTCAAAACACGAAGTTATGCGGTGTAAACTACTCTTTATAGTGAGAATGAAACAGTTTTTATAGTTATTATTTATTATACACGACTAGTACTCATTAATAAATCTGATATAGCGCTCATCTTTAATAAAGTATTGTCGAGAAAATTCATTAATAGCTATTTGTCTCACAATGTTCTCATCTATCTCTTCGTTTGGGAACATTAATCGAAATTCGTCTCTAACCTGATTAATATCAAACAAAGTCATATTATGCTTGCTCATAGCCAAAGAATCGGCTTCTACCATAAAATATGGATGATTTGTGACCATGATCGTTGTCATTCCATAATTCTTAATTAAATCCATAAAGGATTTAACGTCCCTTATACCTAGATTTGCTTCAGGAAACAACAGAAAAAGAATATTTTCTTTTTTTTCCTCCTTCATCAAATCAATACATGCTTTCCTCGCCTCTATTGCACTTAAATGACTAAAATTATTATGAACATCTATTTTAAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACTTCATTCTAAAAGATCATAGTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //