Array 1 67671-66848 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBN01000039.1 Streptomyces sp. uw30 Scaffold_39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 67670 30 96.7 30 .............................G CGCTGGAGCAGGCCGACCGGACCGGGAGCG 67610 30 96.7 32 ...................C.......... ACGGGTGACGGGGAACGTCTGCTCGCGGCGTT 67548 30 100.0 31 .............................. GGGTCGGCGGTACCGAGTCGCTGCTCGGGAC 67487 30 96.7 31 .............................T CTTTGCGGGATCACCTGGTGTCCGAGGCGTT 67426 30 96.7 31 .............................T TGGCGCCGTTGTTGGAGATCATCGCCATGGC 67365 30 96.7 31 .............................T CGCCTGCCTTATCGGCGCTAGTCGACAGACC 67304 30 100.0 31 .............................. CCTCGAAGAGCTTGTCTTGCACGCTCGTCTT 67243 30 100.0 30 .............................. TGCCCGCCGCGCGGATGCGGACCTGGCCGA 67183 30 100.0 31 .............................. TGGTCTGGGCGTCGTCCATCTCGAACATCAA G [67182] 67121 30 96.7 31 ................A............. TGGTCTGGGCGTCGTCCATCTCGAACATCAA 67060 30 96.7 31 ................A............. TGGTCACGACCCCGGCGGCGGGTGGCTCGTC 66999 30 96.7 31 .............................A TGTCGGCAGTACCAGTCCTGGAGCGAGAAGA 66938 30 100.0 31 .............................. ACCGGGCGCCCCGTCCCCCTTCGCGGTGTGA 66877 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== ================================ ================== 14 30 97.9 31 GTGGGCTCCGCGCGAGCGGAGGTGAACCGC # Left flank : CCCGCGCATCGTCACCGACACCCAACAACTCCTCGACCCCCAAACCACCAGAGACATCCCCGACCCCGAGGAACAACTCGTCGACCTATGGGACCCAGTAACCGGCCCAGTCTCCGGAGGCCTCAACCACGCAGGCACCACCTGACCGCTGCCACGAGAAACAGTCCGTCATGACCTCCATGATCGCCATCTCCTCCACCGCCGTCCCCGACCACCTCCGCGGCGCCCTCACACGGTGGCTCCTCGAAGTAACCCCAGAGCTGTACGTAGGCACCGTCTCAGCCCGCGTGCGCGACGAGCTGTGGTCCTCCGTGGCGGCATGCACCGGCGACGGCATGTCCGTTCTGATTCACCCCAGCGACAATGAACAGGGTTTCGAGCTCCGCACAGCAGGAACCCGCCGCCGTCACCCGGCCGACTTCGACGGCCTAACGCTGATTGCCTTCCAGGCAGCGGGCAAAGAAATGACAAAGTCGGTCTAACGCCGCAGGTCACGAAGT # Right flank : ACCGGACGCGGGGGGATCTGAGCAGCACGCACGTGCTGAAGATCAGCACAAGGCGGCGGGCGGCTCGTCGATGCGGCCTGGAACTGCCTGCCTGCTGGGCTATCAGGTCCCAGTCGATCGTCTTGGTGGAGAGCACCGGGTCCAGGTTCGGCCATTGGTCGTCCCGACCGGCCGCCGGCCGGTACAGCTTCGCGGAGCCGATGTTCTTCAGCCGTGGCATCAGCTTGAAGTCGAGCGTGTGCGCGAAGGCGAACCCGACGATGGACGCACCATGGGTGTCGGTGTACTGCCGGTCCACTTCGATGTCGGTGCAGTGCCGCAGCACGCCCTCGATCATCGAGGCGAACTCGGATGCCGAACAGGACTTGAGCTGCGAGTAGATGCAGACAGATTTCCGCTCGACGGTTCTAGGTTGGCGCTGACCCGTGCCAAGAGGAACCCGCACCTGATCGTCGGCCCCGGGTACCACACGAAGAACAGACACAGGCGTCCTGACGGGC # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGGCTCCGCGCGAGCGGAGGTGAACCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 86332-85815 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBN01000039.1 Streptomyces sp. uw30 Scaffold_39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 86331 29 100.0 32 ............................. CTCCGTAACTCCGCGGTCGTCATCCTGCTGAC 86270 29 96.6 32 ......................C...... ACGCGGAGGGCGGCGCCCTCGGGGGCGTCGGG 86209 29 93.1 32 .......A................C.... AAGTTGGACGACGTGGACAGGTACCCGCCGCC 86148 29 100.0 32 ............................. TCGAGTACGGCCCAGATGGCCGGGCTCTTCCA 86087 29 100.0 32 ............................. GTGAACGTCATGGCGACGGCGAGGGGTCCGTC 86026 29 96.6 32 ......G...................... GTGAACGTCATGGCGACGGCGAGGGGTCCGTC 85965 29 96.6 32 ......G...................... TTCTGCGTGGCCTCCGGGTAGGCGTCGTCCGT 85904 29 93.1 32 ...........A.............T... AATCCTCCGCACCGTGACGGCGGCCGGGCGCT 85843 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 97.3 32 GTGCTCTCCGTGCGAGCGGAGGTGACCCG # Left flank : CCCGGGCCCTGGCCTGGCTCGGCGCCGCCATGCTCCTCACCATCGTCCTGCTGATGGCCTCCGGCCTCGCCCAGGACACCCCGAAGCAGACCGCGACCGGCACCGTCCCGGCCGGCGGGGGCAAGGTCACCTTCGAGATCGACAAGGACGATCCCCAGAACCCCACCGGCAACCGGTTCACTGGCGAGCGCTTCGAGAAAGCCCTGAACGTCACCCTCAACTCGGTGGTGTTCCGCTCCTCCGGCCAGGACCTGACCACCGCCGGCACCTACATTGAGATGACCTCCCGTTTGACCGAACCCGTCCTGTTGGGCCTGGCCGTCCTCGCTGTCCGCAACCGCGTCAAACGCTGACTGCCCTGACCTGGCCTGGCGGAGCCCTGTGAACGGTTCGACCGAACCGTTTCCGGCTACGTGCCTTACTTGCCTGCGCCGTCGATCATGCTTTTGAACTGCACAGTAGCCCTTCGCCCCCTAGATACCTGCCGCCGTGCAGGCGGT # Right flank : TCCACCAGCAGAAAGCATGGGACAGCGGTGCCTCCGCCTGGACCCCACGACGCCGCGAGGCGTACGCGAACGATCAGGGCGCCGAGCCCTCGCTCGTCGCCGTGACTGCACGCTCCAACCGCAGCAAGGCTGACCAGGATCCCGCCGAGTGACTCCCCCCGCCGCCGACGTGCACTGCCGATACCTCGCCGAATGACAACGGCGCACATCCGTTGGCAGCATCCGTCACTAGGTGGAATGAACTACCCGGATTTGCCGACATTCCAGCGCCGCCCGAACTACCGTCTGGACGTGGCTTTGACGATCGGACGAGGGGTGGATGAAGGGCCGGGAGAGGCGGCTCGCCGTACTCGAGGCGCTCTACGAGCGCGAGCAGCCATCCGAGCACGATTGGGTCTTGGACCGCGACGTTCCTGGATCCTTCCAGCAGAGTGTGGAATCTGTGGTCCGCGAAGGGCTGGCCGAACTGGCGGACCGGGAGACCAGAGCCGAACTCTCCG # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGTGCGAGCGGAGGTGACCCG # Alternate repeat : GTGCTCGCCGTGCGAGCGGAGGTGACCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 89428-88301 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDBN01000039.1 Streptomyces sp. uw30 Scaffold_39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 89427 29 100.0 32 ............................. CCTGGGAGAAGGAGAACCGGACCGCATGAGCA 89366 29 100.0 32 ............................. TCGTCGAGCAGGCCGCCCAGTTCGGTGCCGTC 89305 29 100.0 32 ............................. CCCACTTCCTCGCCGCGCTCGTCGCCGCCGTC 89244 29 100.0 32 ............................. CCGTACCCGTGGCAGGTGGCACCCGAGCACAT 89183 29 100.0 32 ............................. GTGACGAAGTCCGGTGGGTCGGGGCGTGGCCA 89122 29 100.0 32 ............................. GAGTGGCATGAACTCGGACGAACTGAAGCGGG 89061 29 100.0 32 ............................. CCGAACGGCAGGGCGACGAAGAGGCCTGGAAC 89000 29 100.0 32 ............................. GTCGCCTGCTCCCGCCTGGGATGCGTCGATGG 88939 29 100.0 32 ............................. AATACGACGCGGCCCGCAGGTGTGCGGACGCC 88878 29 100.0 32 ............................. CGGGAGCGCCGCCAGACGCCGTTGTCCTCCCA 88817 29 100.0 32 ............................. CCGGCCGTGTCGGCGTCGCCGGCGCCCACGTC 88756 29 100.0 32 ............................. CTGATCCGGTCACTGGCGGCGTCGAAGCGTGT 88695 29 100.0 32 ............................. CTCTGGCCGACCTGCGCGAACAGCTGTACCGC 88634 29 100.0 32 ............................. ATCCGTGACGGCTGGTCGTACGCCGACATCAG 88573 29 100.0 32 ............................. CCGTCTGGCCCGATCAAGGAAGCGCCGCAGGA 88512 29 100.0 32 ............................. CCGTTCACCACGCTCGCCGTGGGTATCGCCGT 88451 29 100.0 32 ............................. GTYGCGGTGTCGCTCATCTCGAAGGAGTGGGC 88390 29 100.0 32 ............................. CTGCGGGGCGTGCGGGCGGGGGAGATCAGCTC 88329 29 96.6 0 .......................T..... | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.8 32 GTGCTCTCCGTGCGAGCGGAGGTGACCCG # Left flank : CTCGCTGCGTACGGCTGCGAAGGCCTCCGGAACCTGCGCCTGGAAGGGGGGAGTGATTTTCCCCAGGTCGTGCAGACCCGCCCAGAACGCCAAGACCTTACGGGCCTCGGTCACCGACAGCCCCAGCTCCTGAGCCGTCTTCTCGCGTAACTGATCGCTCAGCAATACATCCCACAGAGCACCGAACACCGCGGCGGTATCCAGCAGATGGCACATCACCGGGTAAGAACGCGGAAGACCATGCTCCTTACCCCACATCCGTGCATCGACCTGATGGCGACTGGGTGGGACGGACTCACGCTTCATCATGACGGCAACGGATAGCAGGCCCCACTGACAACGCGCCCTCACCTGCAGGAAGACGACAAGCCGGTAAGCCGGACCCTAGACTCCAAGCCGAGGGGACTCAGTTGACGCGTGAGGTCGCCGCTTCAGGGCCCCGGCCATCCATGCGTCGTAAAGAAGTTGCAAAGGGACTGAAGAAGCCCAGGTCAGCAAGA # Right flank : GTCGACGACGGGGCGCCCGCTATCTCGGGTGTCGAGCGGGCGACAGGCTTGTGAGGCATGTGCGCCTCAGTGCACCGTGCCTGACAGATATCTACGGGTTGTTCGGGCACGTACGGCATGTTCGCAACGTGGGAGCCGATCGCCGACGCTGCCCGTCACTGTCGAGCTTGAACCGTTCCCGTGCCCAGGGCGTCCATACGGGTACCTGACACCGTGGAGCAGTCGCACCATGAGCACATCTGGATCGCCATCCTGGCTGCACTGCGCACACGGCGCAGACCCTGCTGCCGACCCCGTTGGTTGCCGCGGCATCCACGTCCCTGACCACACCGCGTGCCTCGCCCACCTGACCGACGCCGACCGCGACGCCTACCTGGCTGGCCTGACCCCCGGCGCCAGCATCGACCACCGGGGCACCACCTTCACCGAATCCCTCCTCAACGCCTTACTCAACGCCGTCCGTGACCCCGCAACCGGTCACCCTCGCTTTGGCGACGCCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGTGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //