Array 1 1728-1296 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PKJZ01000031.1 Lactobacillus jensenii strain UMB0007 .16933_8_49.31, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      1727	    36	 100.0	    30	....................................	TCCAAGGCTACAGCTTTTTCCATTTCGCTG	
      1661	    36	 100.0	    30	....................................	TCTTGATTTCACGAGTTAACATTGGTTGAT	
      1595	    36	 100.0	    30	....................................	ATTAGGATACTGTGTAGGATATACCTTCCA	
      1529	    36	 100.0	    30	....................................	TTGTAAAATTTGTGATAATGATTTTCGTGT	
      1463	    36	 100.0	    30	....................................	TTCCAATGGTGAAACAAGAGTTATCAAATA	
      1397	    36	 100.0	    30	....................................	TGTTGCAAGCGCCGACCCTTATGGTGGTAT	
      1331	    36	  97.2	     0	...................................A	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  99.6	    30	GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC	                              	       

# Left flank :   CACAGGATTATCTTAATTCTTATCAGAATAAGATTATTTCAAATCTGTTTGATACTTTAAATGAAAATCAGAGAAATAAAATATTTAATACGTGGCGTCAGCTGAGTACTGATATTCAAGATATAATATTTATGACTGATTTACCAATTGAAGTTGGTGAAAATCTAGATTTAAAGAAGCTATTCAAATTTGATGGAATTCACTTTGATGATTCTGTATTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAACGTAAGTCATTATCTTACAAAAGAACAATTGAATAACTTAATTACCTTTATAAACGAAGTAAATATGCCTTTGATATTAATAGAATTTTCATCTTCAGATTTTAAGGTTGTTAGTGGGGATGCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTTAAATCTGAGAAGCTGATGATAAAATGTCG
# Right flank :  GTAACAAAAACCAATTTAATTAATATGATCATATTTTAATTTGAGGAGAAAACTAAGTATGTGGACATTTCTTAAATTTTTTCAGACACCAGTAGGCTATTTAATTGGAATGGCTATTCTTGTCATATTGCAATACGTGTATGAATGGATAAGAGACGAGCGCTAAAATATTGTTTGGTTTATTGGCAATTAATATACTTTAGAAAGCTGCAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGCATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATACGATTTTTAAAAGTTACTGAGGGGGCATAATATGGATGCAATTATTGATTTCTTTACTAACCCTATATGGATTACATTTATAACAATTTTATATTTTTCTATGGAGTTTATAGAAAATAAGCGAAAAAAATAGCGCTTTTTTATTGGTAAAGTAATAACAATTATGTCAGTTTTAAAAGCT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.97%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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