Array 1 5922-6430 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANE010000027.1 Vibrio metschnikovii strain M11F.1 Scaffold27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5922 28 100.0 32 ............................ GATGGTTGTGATTTCTCTCCTTTTTTCGAATG 5982 28 100.0 32 ............................ TTTGATTTAGCGTTTTGTGGTCTTGAACAAAA 6042 28 100.0 32 ............................ ACGAAGAAACCCAGCAAGTCGCCAACGTTTTT 6102 28 100.0 32 ............................ TTTTGCATTCGGGTGGGATGGTTTTTCCGCCA 6162 28 100.0 32 ............................ CGAAAGAAATTGCGCGAGGGTTTGAACGGCAA 6222 28 100.0 32 ............................ GTCAGCAAGGATCCGCGCCATGTCAGCTTTAA 6282 28 100.0 32 ............................ AGATATTTGAAAGTGAACTGTTTCATTGTTAC 6342 28 100.0 32 ............................ GGACACAAAAGCGGTACGTTCAGCATTTACCA 6402 28 96.4 0 .............T.............. | A [6425] ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGTCGGCTTTTGCTCTGATAAATTGTGTGCGTAAAAGGTTCGATTGATGCTGAAAGGTCTCTTCCTTTGGTGTTGTTTGCCCATTGATTCCGCAGGCTAATTCGCTTCAACTTATTTGGGATCTTATTTGCACCAATGATTGCTGAAAGTAGGCAGGTTTATCATTTTGAGTTAAAGTGGCCGCAACCGATAGTCATTGTAAAAGTTCAATGTAATCAATGAGTAATAAAGCATAACAAACACTTCAAGAGGGACTTCCAACGCGCAGCATTTTCATTATGCGTTGATTTCGGTGGTTTCAGTGTTGTGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGTAATGCAGTTAGTTGGTAGTCGCGTTGCTCACCCCTTAACGCGGCGTTATGGTGCTCTATAGATTTAAGCACAGCAATAGGAAAGGAATTTTGTACGAATGATACGTAACTTTTATACATGCGACAAAGAAGTTGACCACAATAGCCATGATGGTGAAGGTTCAATCGATATTTATCGTGCATTTAGGCGTAAAGATTTTGATGGTGCTTGGGATTTTGCAATTCGCGTTGTCATGCCACCGGGAAGTTCCATGGGAGAGCATACTCATGGGGATGATGAAGAAATGTACATTATTTTGAAAGGTGAAGGGACAATGATCATTGAAGGTGAAGAAAAGAAAGTATCTTCAGGTGATATGATCGTAAATCAGCGTTTTGGTACTCATAGCTTATTGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1473-1799 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANE010000010.1 Vibrio metschnikovii strain M11F.1 Scaffold10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 1473 38 100.0 34 ...................................... TTAATGCTTCAGTGGTAATGCCAATTTTATCTGC 1545 38 100.0 33 ...................................... CAAATCAACCATCTGTACGTTTGTCCGTGTCTG 1616 38 100.0 35 ...................................... TATAAAGCCAATAAGTAACGTTGCTGTGATTACTA 1689 38 100.0 35 ...................................... TTTTGCTAACAGCCCAAAGAACATGCTTTATATGT 1762 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== =================================== ================== 5 38 100.0 34 GTCCATCTGGACAACGCCCTGACTGAAGGGATTAAGAC # Left flank : TCATCAGTTATGATATCAGCTGTCCTAAGCGTTTACGAAAAATGCACAAATACTGCAGCAAATACGCCTGGCCGTTACAAAAGTCAGTTTATCTCTTTGCTTTATCGCGAACGGAAAGAGAAAAAACCTGCCAACGTTTGCTCAGTATGCTTGATCAACAGCAAGATAGGCTATTATGTCTGCCTTTTACCTTGTTAGAAGGCAGCTTTCATCAGGTACCAGAGAGCCCATTAATCTTGATCCACTCTGACCCGAGATTAGTCGGCTTTGTTTACTAACCACCCGCCATGATCGAATAATCAAGGGCAGGGGATATTGGCCTGAGTTAAGTGGCTTATTTTTTGCTGTTAAATTTAATCTTAATTATCATCGCTAGTTAGCCGCTTGCTCTATTTAAATGGTATGACAATTGCTTATTTTTGCCTTGCGGGCTTTTGTTTAAAACGCTTGTTTAATGATAAACTTGCATTAATAAAAACAATCGGTTATAAATAGCTTCT # Right flank : CAGATATAGGGTGACGGCTGCGTAATCTTTTTTAAATGACCGTAGTTACGGGATGAAAAAACAGTCGGATTTCAAGGTGATTAGGTGTGAAGCAAAATAAAAATGACGCACTCAGTAAGAGGCGTCATTTTTTATGGTTCTGGCCTTATTTAATCTTGCTGAAAATGAATGTTTTCAGGTAGCACATTTAGACCTTTATATGCAATCGGGGTTCTGACGACCTCGCATTTTAATGGCTTGTAGGTATTAACAGTAACGATTTGATAATATTTTGCCAACCGAGTACCAAGAGCATCCGTCAATGCCATATTGGTTTCTTTCAGTAATCGTACCCATAAACTTTTATGGTATTTAACCAACGCTTTTACAATATCGTCATCGTTTTTTTCTTGCAGGCGTGTTTCATGGTTTGCATACAAAAATTGAATTTGCTTATTTTCTTGCAGCAACCAACGATTACGATTGTTCCGTTCGTTTAATGGTGTATTTGATGCTTCATC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCATCTGGACAACGCCCTGACTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 2 46086-47491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANE010000010.1 Vibrio metschnikovii strain M11F.1 Scaffold10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 46086 28 100.0 32 ............................ GTCAATAAACGTGATGACATGTCGATAGTGTC 46146 28 100.0 32 ............................ ATCATGTGCAAGGCTTCATAGATTCGGCGTGC 46206 28 100.0 32 ............................ AAGTCTCACAAAAATATTTTGATTTGATTTGC 46266 28 100.0 32 ............................ AGTTAAAGCCGTTGCCAGCGAAAACAATACTG 46326 28 100.0 32 ............................ AAAGAGCTAGACCCCGTAGAAGGCGTAAACTG 46386 28 100.0 32 ............................ ACAGAGAAACCGAGACGCCAAAACCTTATACT 46446 28 100.0 32 ............................ GTTTATAAGTGCAATCGCCTTGAGCATTCCGG 46506 28 100.0 32 ............................ CCAAACTTAGTGCCAGCGGAGTATCCCGACTT 46566 28 100.0 32 ............................ GCAAGTATTGAATTAACAGGCGCGGACGGTGA 46626 28 100.0 32 ............................ TCCTCATCTCGATAAAGTTCAGTTGCGTAATT 46686 28 100.0 32 ............................ AATTAGTTGGCTATCTACAACAGCGAGATGGC 46746 28 100.0 32 ............................ GCTAACGCGCAATCATCTGAGCAAATTGTTTC 46806 28 100.0 32 ............................ TTAAACGCTGATCGCTCAATGCTTCACTTTAA 46866 28 100.0 32 ............................ GCTTCGGTCGCTCCCTACAGCACTGGGGTGGC 46926 28 100.0 32 ............................ GCTGGGCCGCTGTCCCCGCCGTTAATAGGCAT 46986 28 100.0 32 ............................ AATCATAACAAGTACACCTTTGCTAAAATGAC 47046 28 100.0 32 ............................ TTGCAAAGCATAAGCAGGACGGCGGCGCGTCT 47106 28 100.0 32 ............................ ATCCATAATTTGTTTCTGAGCTGCTAAATATT 47166 28 100.0 32 ............................ TTAATTGGGGTTTTTTCTTATCTGTCGTAAAC 47226 28 100.0 30 ............................ TTTGAAAAAGAGAAGCAGAAGCCATTCCGT 47284 28 100.0 32 ............................ GGGTGCGTAAACATTACGCAAGTAGTTGTCCT 47344 28 100.0 32 ............................ CTGTCCGTCAACGTCAGCATACACATGACAGT 47404 28 100.0 32 ............................ ACTAACTGCAAGTAAGTGACGTCAAGGATCTG 47464 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 24 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATGTGACTTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGCATTATGGGCAGAAAAATCTGCTAAACCGCTGGAGGAATGCTTGGCCGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCCGTTTGCCGTTTATTTACCTACATAGTCAGCAAACTAAGCAGCGATCACCCGACAAAAACAGCAAGTTCCCGTTGTTTATTGAAATGCAGCAACAAAGCGCTTTACAAGATGGTCATTTCGATTGTTATGGACTGAGTACTAAAGGGAATGGGCTTCCTACGTTAGCCACCGTACCGCATTTCTAAAATGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGTTTTAAATACAATGGGTTACAATGGACGGTTTTTGATAAGGTAAAAATGCGATTTTTATCCTAACCAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATGAAGGCGTAGCGATCATCGAAAACTGCTCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTATTCACCGTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 478-1345 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANE010000034.1 Vibrio metschnikovii strain M11F.1 Scaffold34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 478 28 100.0 32 ............................ TATGATTTAACAAATTGAAGCTAAAGAGGCGC 538 28 100.0 32 ............................ GTGGTGAAATGTTCACTCGTTTACGTGGTTTT 598 28 100.0 32 ............................ GTTGGCGGCTTTCGCATGAGCTTCGTCAACTG 658 28 100.0 32 ............................ ATCAATGACGAACTAGCCAAAGCGAAAGTTGC 718 28 100.0 32 ............................ GACCTGACGAAGCAGTACAAAGCTGGATGATT 778 28 100.0 32 ............................ ACTTTGCACGTACTTGGAAGCATCAAAAATAA 838 28 100.0 32 ............................ AAATAGTGAAGGTTTTTTAGTTGCATTTCCCA 898 28 100.0 32 ............................ AAGCGACTCCAAGAGACTTGACCTAAATTTAA 958 28 100.0 32 ............................ AGTCTCCAAGTTCTTGGAAATCGTAACCCATT 1018 28 100.0 32 ............................ AACAACCAATACGATCATAGTAACAGCAACTT 1078 28 100.0 32 ............................ ATGCTTGAAAATATGGTCGTCTATGACAAAGC 1138 28 100.0 32 ............................ TTTATATACGGGCTTGGTGATATGGATGTTTT 1198 28 100.0 32 ............................ TTCTTAAAAAGAGCCTCGAAAAATCATTGGAG 1258 28 100.0 32 ............................ GTAAACGAGTTCGTAAACGCTTTGCTACAAAA 1318 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GTTTTTTCAAATCTGAGCGTTCTAGTCGGACTGAAAATGGTGGCGCACTCTTAGTTTTCTATAGTTCAGATATTGAAAGCACATTGGAGAAAGTTGTGAAAAATGGCGGCGATATCATCCGTCCAATCTTTGAATTTCCTGGTGGTTGTCGTTTTCATTTTATAGAGCCAAGTGGTAATGAATTTGCTGTTTGGTCTGAAGCACGCGCATAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGCAATGCGGTGAGTTGGTCGTTGCGTTACTCACCCCTTAACGCGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTGATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATTG # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTCATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATATTTCTCTTAAATTCAACGTGTTACAAATTTAAAAGTTAAGTGATAATGTGGGATCTTTGCTGGTTCATGATTTCTTGTGATGGATAGCTGTTGATTTGATCAAGTTTATCAATGACTAAAACATTATCGTTTAATCGCTTGGCAGCTATTTTAATTTGGTTTGAATTAATGGTTTGTTTCTCTGAGATTTATCATTAGAATCAATGGGTAAGCTTGAGTCGATTTAAGAATTAACGGTTTTTCTGTATCAAAAGTTAGCTCATTTTACATTAAGTGTTTGATGTTGTTTGCTATTTTCAAAGGTTGCTTGGTGTTTCAGTAGCTGTCTGGAACTGAAATATAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3252-2444 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANE010000041.1 Vibrio metschnikovii strain M11F.1 Scaffold41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3251 28 100.0 32 ............................ CTTGTAAAAGCCGTTGCCAGCGAAAACAATAC 3191 28 100.0 32 ............................ CCTTGGTAACTTCTGTCTTGCGCTCAACAGCA 3131 28 100.0 32 ............................ CCTTGTGCATGCAACCGCCTCTTGAAACCCAT 3071 28 100.0 32 ............................ TTGGCAGATCAACCCCAACGTTGTTGATGCTG 3011 28 100.0 32 ............................ AGTAGACGCAGTATAAGGCTTTGGCGTTGCGG 2951 28 100.0 32 ............................ GGTTCTTGCTCTATCCATACGTGAGTGCCAAT 2891 28 100.0 32 ............................ TATGGCGAAGAGTATGAAATAGCGTGTACTTG 2831 28 100.0 32 ............................ ATTGTTTGATTCATTTCTTCAATGTCAGTGAG 2771 28 100.0 32 ............................ AGAACGGAAACAACTCAGCCCATGATGTAGCA 2711 28 100.0 32 ............................ GTCGGAAGGTAATGCTAATTGGTATAGTTTAA 2651 28 100.0 32 ............................ GTTCAAAATTAAATAATGTTTCACTGTTTTGC 2591 28 100.0 32 ............................ TGCTACTAACTTGTGCTCAAATGACCAGCTAC 2531 28 100.0 32 ............................ GACTAGCTCGGAGTTGAGCGCGGCCAGCTCCT 2471 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 14 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AGTTAAAGAGAAACAGAAAAGTGAATTAGCCCGAGAACAATCGTTACAACACACATAACAAACAATTCAAGCAGACCCTCAACGCGTGGCATTTTTGTTTTGCGTTGAGTTTAGTGATTACGGTGTTATGCGGGAAGTTGGTAGTCGCGTTTCGGGCTACTTAATTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCAT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATAAGCACTCAAGGCTCGTACGGAGGATATATAAATTGGAACTGATTTATCATTATACTAGTGTTGCAGGTTTGAAGGGTATCTTAGGGCAAGGTACACCTACACTTCGAGTAACAGATTCTAGATATCTAAACGACTCGAATGAAATCCTTCGTGGTGTAGAGCGAGCTATGAATGAAATTTCTCAGAGTCTAAGCGCAAAAAAATATGAAGAACCAATACCCAATACAATTGAGTTTATGGAGCGGATTATTAATTCTATTGGCCGCTCTCTGTTTTTTACTGCATCTTTCTGTAAAGAAGGGGATAAACTCGCTCAGTGGGTGTCGTACTGCCCCCTAAATGGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //