Array 1 1860994-1862851 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083258.1 Citrobacter braakii strain A3 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1860994 29 100.0 32 ............................. CGCACAGACAGGTAGGTATATGACTTAGTCGA 1861055 29 100.0 32 ............................. CTATCAGTACGAAACGTGAGGCCGACCAGGCC 1861116 29 100.0 32 ............................. CTGGGGTTACGCCACGTGGAGATCGTCCCGCA 1861177 29 100.0 32 ............................. ATTTAACACGCATTGCTGCTCAGGTTGATCCG 1861238 29 100.0 32 ............................. ATATCGGGCGAACCCTGATAAATCATGGTGGT 1861299 29 100.0 32 ............................. CGTGTCAGTAACTGCGCTTGCGTTGACACTGG 1861360 29 100.0 32 ............................. GCTGGAGACATTCTAGCCCTATGGGAGTGGGA 1861421 29 100.0 32 ............................. TCACTGTTGCGCATCATTTTTATATATTCTAT 1861482 29 100.0 32 ............................. GACCATACTGGAAACATGAGATTGTTAACATT 1861543 29 100.0 32 ............................. GTGGCAGTGCAGATTTCAGGTCATCCGGCATC 1861604 29 100.0 32 ............................. TCGTGAATATGCGCCCCTTCAACATAGTCAGG 1861665 29 100.0 32 ............................. GGATGCAGCAGGCAATGATGAGTTGCTTTTCG 1861726 29 100.0 32 ............................. GTGCATCGCCACCGTCCTTCTTGAACAGGACG 1861787 29 100.0 32 ............................. TGCTCCCATTCCCCCTGGGTCATTACTTTTTT 1861848 29 100.0 32 ............................. TTACCGCGCACCTCGATTTCCCACGTCCGGGC 1861909 29 100.0 32 ............................. CATTCAGTCAGACCCCTCTGGGTTTGACCCGG 1861970 29 100.0 32 ............................. GAGACCCGACCATCGAAACGGTAAAATGTGCG 1862031 29 100.0 32 ............................. ATTTGTTGAGGTACAAGCACGTAACCTTCTGG 1862092 29 100.0 32 ............................. CCGTTGAAAAAGCCGTTTTCGATTCACCAGAG 1862153 29 100.0 32 ............................. CCTCTGAATTTTTCCGTTAAATTAGAAGTTGC 1862214 29 100.0 32 ............................. CACGTAAACGGTGATAAATGGCAACGATTTCG 1862275 29 100.0 32 ............................. AATCCCAGGCGCTAACGTATAGCGGACGTCTG 1862336 29 100.0 32 ............................. GGGTACATCTGTTACCCAATCCTCGGTACGAT 1862397 29 100.0 32 ............................. ACCGCACCCTATACATTTGAATTGCGTGATGA 1862458 29 100.0 32 ............................. AACGGTCAGAATTAAATCGGCACTGGCGCTAA 1862519 29 100.0 32 ............................. GATTTTAGCTGGTCTGCTGTGAGTTCAGCAGC 1862580 29 100.0 32 ............................. ATCTGCCGGATCTATCGCAGCCTCTTGTTGTT 1862641 29 100.0 32 ............................. TGTTCTGCTGTTTCGATTTCTTCGGTGATCCG 1862702 29 100.0 32 ............................. TGCAGGGAGCTGGCGGCTGCGAATGTGGGACT 1862763 29 100.0 32 ............................. ACCAGTGGTTCTCCTCCTTTATGCTGCGTATC 1862824 28 89.7 0 .................-.......T..A | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAAGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAGCCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAATTTTTTCTACGGCTATAACCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGTGGTTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTTGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCAGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //