Array 1 2262009-2260884 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL945017.1 Prevotella multisaccharivorax DSM 17128 scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2262008 37 100.0 36 ..................................... TGTAAAAAGTTCCTTAAGAAGTTTTATAGCGGTTGG 2261935 37 100.0 35 ..................................... AAAGTACAAGCAGTTGATTCAGATTCAGTAGCTGC 2261863 37 100.0 35 ..................................... ATTGTTGACGAGCTCGAAAGTATGAGCTTGCTCAA 2261791 37 100.0 35 ..................................... ACGGGCAAGAATATGAAGTTGAAAAAATTTTATCT 2261719 37 100.0 36 ..................................... ACCTAGCCGATACGGCGTATACAGCCGATGTAGAAT 2261646 37 100.0 33 ..................................... ATTATTTCAAGCCAGAGTACTGCCATTACAGTA 2261576 37 100.0 39 ..................................... TTCAAACTCCACACCCTCTGCCACGGACATCGGAATGCC 2261500 37 100.0 35 ..................................... ACTACGAGGAGTATGATATAACACACCAATATTTC 2261428 37 100.0 35 ..................................... GACTACACAAGCGTAGCATATCAGGCTGACGTAGT 2261356 37 100.0 36 ..................................... AGGAGGACAAAGCCGAGTAGTCTTCACAGACAGGAT 2261283 37 100.0 33 ..................................... GCAGCCGATAAAAATATATGTTCAACGAAAAAC 2261213 37 100.0 36 ..................................... CACAGAACAGTTTCACAATCACAGGTTTCGTCGGTG 2261140 37 100.0 36 ..................................... ACTTCGACATCCATCTGACGGCTACAGCCATCGAGA 2261067 37 100.0 34 ..................................... GATGATAAATTTTACAGAAAACAAAGAGAGCAAC 2260996 37 100.0 39 ..................................... TGTAAAGGACTCTATTCGCTCGGGCAGCCGATAAAAATT 2260920 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 16 37 100.0 36 GTCTTAATCCTTATTGTAATGGAAGATGCTCTTAGAG # Left flank : CGTACAACGTCCCACGATACTTGCAGGAACCAGGAAATGTCCTGGATCGTTGCAAAGCGTGACAGGTCAAGTACCATGTTCGCAAAGGCCTGTGTATGTCGACGTTTCCCCTTGGCAAAATCAATCTTCTCCTGCTGGATACACCCACAGTCATGACATAAAACACGTTGTACATGCATGTCCAGATAAGTCTTGTTTAAGCCGATTGGCACACTTACAAAGCGACGAATGTGGCTGCCGTCAAGAACAACATGATGGCTGCCGCACGCTGGACAACAAAGTTTTTCCCTGGGTGTTTGGATTTCCAAAACTAATTCATTACCTTCGTAGCGCATATCCTGACATTCCTGTCGGGAGACGCCTAAGGCGTTTTGCATTATGCTGGTATTCATGTTCTTGGAGTTTGGGCACTACAAACAAAGATACATAATACCAGCTCTTTTAAATATATACAACAGCCTATCTATTCATTTAACGGAAGAACCGAGTTTTTCTGTTGT # Right flank : GGCAGATATCAAAATTCCCAGATATACCTAACCCTTTGTCGCTGTTTATGTAGCAATATTTGACAAAGAGCTTGGAAAAGTGGGTTTTTCTAAACGGGTGCAAAGATACAAAGAATGTACAAGAAGTCAAAGAATGCGGAGTGAAAGAAACTTAAAAGAATAGTGTATTCCGGCTGCGAGTGATGATGTCTACATCGATATGCTGGCCAATGATGCTCATAGCCCTCAGCTGGTCTGTAGAGATGGGGCAGATGATGATGCTGTCATGATTGTCATAAAGAGACTGCACTTCGGCCAAATCACGCTTGATGGTGTCGAAAACGGTCTTGTCGAGATCGGCAAGAAAGATGGATCGCTGGATGCGTGTACATCCTTGGCGTTCGAGATACTTGGCGATATGGTATCGCACTTTGTTGCTCTCAATATCATACATGACAAGAAATAACATATTGGTGGCAGTTCGTGATGGACGGTTGACGATGCCCAACAGATGGTCGATG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTGTAATGGAAGATGCTCTTAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2368181-2367504 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL945017.1 Prevotella multisaccharivorax DSM 17128 scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2368180 30 100.0 36 .............................. TGAGAAGCTGAACGGTACCGACATCAAGACATTCAG 2368114 30 100.0 34 .............................. AGGACACCCGCACCCCGAAACAAAAGGAGGCGTT 2368050 30 100.0 35 .............................. CCATCAAATTATCACAATATACGGGGTATGAGTTT 2367985 30 100.0 34 .............................. CACAACAGGCAAGTGAGTTGCCCACTGACTGAAA 2367921 30 100.0 34 .............................. TGAAGAAGTGCTACATCGATACAGCCGACACGGG 2367857 30 100.0 36 .............................. TACAACCAAATTCAAGCAAAACAACCATTTGCTTGT 2367791 30 100.0 36 .............................. TACATAGAGGTAAGCATAGAGCGAGGTCGATGTGGA 2367725 30 100.0 34 .............................. AGAGGTAGCATCGTGGTACAAAGGAGGCTTACCG 2367661 30 100.0 34 .............................. AGCCCGACTACTCAATCAAGTAATGAGGATTTTC 2367597 30 100.0 34 .............................. TAAGTCGCTGATACGTGATGCCAACCGCATACAT 2367533 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 100.0 35 GTTTTAATCGCACCTTTATGGAATTGAAAC # Left flank : GTGACCGGGTACGTATCCAAATATTTTTTTTAAGACATCAGCGAACTCCTTCGAGTAGCTGGTGCCGTTGGCAACTAAATCATAGCGATTAAGAACTACATTATGGCCTTCACTGTCTATCCATCGGCGACGTCGCACATGCAGGATGACCTTGCGGTCACGTACAGGGAAGTCTGTCACTTCACGGCTCTCTGTGAATCCGTTAGGCTTAAGGTCATGCCACTCATCAGAGCGTGTATCTCGCTCATCAAGATAGATGTGGAGCTTGATCTTCTCTGCTCCGGTCTCTGCATATTTACCTGTATGCTCTTCGCTGACGTCTGTCACGTCAAAGAAATCCAAGATACCATCTGGAAGCAGAAAGCTAGCCAGAGTCTTATAGTCGAATGTAGAAGTCTTCTTTCCCATGAGTGCAAAGGTAATGCTTTCTCATTGCATTCATCACACAGACAGACAAGAAAAAACAGGCTAACTCGGCAGCAGAGGCTCAGACAAAGCTG # Right flank : TTGCTACGCTTCGTGAGTTCTTTAACCCAACTTGCAGCTTTTAGCCCATATGTCCGGCAAGACTCTTAAACTTTGTCAACAAAATCACTATTTTGACCGATATTTGCCCGATTTTCCGCTCTTTTGGACTGTTTCCCTCGTAAAAAATATTAAGCGATTCGTTACCCCCCTAAAATGTGTGGTACATCGGGTGTTGCATGGTGCCAAGATTTTACCTAACTTTGCACCGATGTATATCAAGGTCCAAACAAGAACAAAAGTCGGTACCGACGGGAAGAAGCATTCCTTCGTTTACCCGAGGCTGTACGAGTCTTACCGTGATTGTGACGGTAAGATTCGCCAGCATTATCTCATACCGCTTGATCTTGACGATCTTCCGTCCTGGAAAGATCGCTATGCCATGTGTCATGTCCTTAATGACATGGTAGTCAATGGTCCTTCTCTCCATCTCAATGAGACTCCAGTCACCTGTAAGGCCAGAGAGGTTTACGGTCAGCTTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGCACCTTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 3 2378639-2369819 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL945017.1 Prevotella multisaccharivorax DSM 17128 scaffold_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2378638 30 100.0 34 .............................. CGAGAAGCTCCATAAGGCTATCAAGACAAAACAG 2378574 30 100.0 37 .............................. GTGGTTCCTAACTCGGAAGAGTGGTACGACCAACAGA 2378507 30 100.0 35 .............................. AGTGGTTACTAGGTGATTATCAGCGTCAATTGCTT 2378442 30 100.0 35 .............................. GTTGATTGATGATGATGTTGATTTTCGCGTTGTAG 2378377 30 100.0 37 .............................. GAAGCAGAAGAAGAACCTATTTTTCCGGGTTTCATAT 2378310 30 100.0 34 .............................. CGAGAAATCGCAGAAGCAGTCAAATCAACAGAAT 2378246 30 100.0 36 .............................. GCATCAGGAACAGTGAAACCAAAATGCGCAGAGACC 2378180 30 100.0 38 .............................. AAGGAAGTTTCTTTAACAACGCGGGAATTACAATCAAC 2378112 30 100.0 35 .............................. TGAGGTTGCGCTGAAGCTCTTTTACGCTCTGGGAA 2378047 30 100.0 37 .............................. TAGCTTGTGCAGTAGCAAGAACACCTTGCTTTTGAAG 2377980 30 100.0 34 .............................. AGAGCCTGCTGCGTAGAAACAGCAGCATTCTGAA 2377916 30 100.0 38 .............................. TAATATATATATATACATAAGTCTCTCGAAACAAAAAA 2377848 30 100.0 35 .............................. TACGCTGGCGCATGACGGTAGTCAGCTTCGTCTGA 2377783 30 100.0 36 .............................. TAGGTCGCTACTTGCCCTTTTTTTTTGAATCATCCG 2377717 30 100.0 34 .............................. CTCAGTACCGTCTGCACAGGCTCGCCGGCTGACA 2377653 30 100.0 34 .............................. ATCAGGTGCTTTTGCTCCTCGACGGACGGATTGA 2377589 30 100.0 34 .............................. TGATCAGCCAGCGGCTCTCAACGACCATCCCCGT 2377525 30 100.0 34 .............................. CCCTTAATAGTTGTTCGGTTCGTGTTAATGATAA 2377461 30 100.0 34 .............................. GCTCCTGCGGCTGGTGGCTCTGCTGCACCTCCGT 2377397 30 100.0 36 .............................. ACGTGCATATCTACTCCGAGTGTCTCACAAGTTCGG 2377331 30 100.0 35 .............................. CGATGAATCTGACCGCGAATGTGTCGACATCGATG 2377266 30 100.0 34 .............................. TGGTGACACGGAGCGTGTCGATGCACTCCAACGT 2377202 30 100.0 34 .............................. CCGTGAGAGAATGAGGGGTGATGTCATCACGGGT 2377138 30 100.0 36 .............................. AAATGCGCAGAAATCTGAGACTTATAATCAGACTTA 2377072 30 100.0 34 .............................. AAATGAGTTAGAACGAAGCGAGTATCAACGAGCA 2377008 30 100.0 34 .............................. TTCGACGATTAGTCAAAGCAGAATACTGTTGAAC 2376944 30 100.0 34 .............................. TAACGATTAGACAAAACTGTAGAAGCGTACTGAG 2376880 30 100.0 34 .............................. GATTGTCTGTGATGGATTCGTTAAGAATCCGTCT 2376816 30 100.0 38 .............................. AGGTTTGCTTGCAGGTAAAGGTGTGATTAACGGTAATG 2376748 30 100.0 37 .............................. ACTGCTTCTACTGATTCTTTTAATAATCAGTCGTTTC 2376681 30 100.0 34 .............................. ACGCGATGATGAGTGTATCGGCTACGGCAAGCAA 2376617 30 100.0 34 .............................. TCGCGATATTGTAGAGGATAACCTTGTTTGCAAC 2376553 30 100.0 35 .............................. TTGAGCGCGTCTGCGATAGCCTTCCATTCGGCGGG 2376488 30 100.0 38 .............................. GGAGGAGAATGACTGGTTCGGTGCAACAGGGTTGGATA 2376420 30 100.0 34 .............................. CAGTATCAAGTGACGGCACTATCTCCTATACTTC 2376356 30 100.0 34 .............................. AGGCTACCGATGCGAGCAACTCCGTGGTATCCGA 2376292 30 100.0 34 .............................. AAAGCATCAATACGTGCTCCCTCACAACAGGCAA 2376228 30 100.0 35 .............................. AATGGTTTTCAAGAAAACCAAAAAAACCAAATGGT 2376163 30 100.0 34 .............................. ACACGGGAAAGTATTCTGCTGCGACCAACACGGG 2376099 30 100.0 35 .............................. TAAGGTGTTGCTCTCCGTTGCGGGCGAAGTAGACG 2376034 30 100.0 37 .............................. GTGGTTGTTAGGTGATTATCAGCGTCAATTATTGCTT 2375967 30 100.0 34 .............................. TGCGAGGAATGGACAAACTGGTGAACATTATCAA 2375903 30 100.0 35 .............................. GCCCTCATCACGCGTACAGTCATCGACACGGCGGT 2375838 30 100.0 36 .............................. AAATTCCACCCCTCACCTCCAAGTAGGACTGGGTGA 2375772 30 100.0 37 .............................. GAAGCCTTATCAGGGCAGGGGCGGAGGTGGTTCTTCA 2375705 30 100.0 36 .............................. GGTTAAGAAGGCGCAGATGGCCTTTGCCAGTATAGA 2375639 30 100.0 34 .............................. GGAGGTCATCAGGCAGCAGCAGGCGATGATGAAG 2375575 30 100.0 37 .............................. ATAGATATGGACGGTATGATTGCTGGAGGAACGGATG 2375508 30 100.0 34 .............................. ACGGAAACGTGACAACAGAAGTCACGCACATGGC 2375444 30 100.0 35 .............................. TCTAAACGACAGTTTAAGCGAGGTGTTTCCCACCC 2375379 30 100.0 36 .............................. ACTGAATCATGTGCTCTCGGTTCTGTTTCGTTGTCT 2375313 30 100.0 35 .............................. GAAGAAGAAAATTTAGGACTACGAAGCGTACGTTC 2375248 30 100.0 34 .............................. AGTCATGGAGACGTCATTCGAGGTGGAGAAGGTA 2375184 30 100.0 35 .............................. TGGTGAGTCATAGCCGCTGCGGTAAGACTGTGAGA 2375119 30 100.0 35 .............................. TTTGGTCGGTGAAGTTCAGATGTGCTCCGCTCTGT 2375054 30 100.0 35 .............................. CATGGAAGGATCAGCACAAGCGAAGATGGAAGAAA 2374989 30 100.0 35 .............................. CTGTTATGTTCGTCTAACGATGGCAAAGTTAGTAT 2374924 30 100.0 35 .............................. AGCAAGTCCTGAAGCGGAAGTAGAACCTATCTTGC 2374859 30 100.0 36 .............................. ATAACTTCATTGACTATGTAAATAAGGGCATTGACA 2374793 30 100.0 34 .............................. AAAAAAGAAGAGGTAGATAAGGACGGCATACCTT 2374729 30 100.0 35 .............................. CTGCGCGTCCGACTGTCCTTTTATACCTTTAATCT 2374664 30 100.0 36 .............................. CTACAGACAATCTGAGAAGCATCATCATAAACGCAA 2374598 30 100.0 36 .............................. AAATGCGCAGAAATCTGAGATTTATAATCACTTTTA 2374532 30 100.0 34 .............................. CTCAAAACAGAAGAAGCATACTGAGAGATACCAG 2374468 30 100.0 36 .............................. ACTATCAGCATTCAAATAAGCATCATGAATCTGAGA 2374402 30 100.0 35 .............................. TTCGCATATACCAAATTCGGATTCAGGCCAGCAGC 2374337 30 100.0 34 .............................. TTGCGCATCCGACTGTCCTTTAATACCTCTAATC 2374273 30 100.0 35 .............................. TGCGAGATGACATAAAGATGACACCTTTGAGAAGG 2374208 30 100.0 35 .............................. TTGTGCATCCGACTGTCCTTTAATACCTCTAATCT 2374143 30 100.0 37 .............................. GTTGTACACGCTTATCGAGTCCAGTCTCGGCTCGTAG 2374076 30 100.0 36 .............................. AAGATTCAATTGTAAAGCATGAAGACGGCACGTGGA 2374010 30 100.0 36 .............................. GCAGATAGTCCGTGAAATTCTGATAGAAGTATTTGA 2373944 30 100.0 34 .............................. TACAGGCGTACGCATTACTGGATCGTGTTGCTTT 2373880 30 100.0 34 .............................. TCCCGTTCGTCCCGCCGTTGATGGCTTTCGTCAG 2373816 30 100.0 36 .............................. GGCCGTTAAGTCAATGTCACCCCCCAAAAAATTGTG 2373750 30 100.0 34 .............................. ATAGATTTTGACATTTTTTCCTGATATTCAGCAT 2373686 30 100.0 35 .............................. AGATGAGACGATAAAACAGTAGAAGCATACTGCGA 2373621 30 100.0 34 .............................. TTGATATACCTCTGCGGCTTCTTGCCTGAAGGCG 2373557 30 100.0 35 .............................. GAAGGATGGTCGAAGACCTTCTGGTCTATCATAAT 2373492 30 100.0 36 .............................. GTCGTAGCTTCTTTCCTTCGCCCTCATCCATGCCGT 2373426 30 100.0 34 .............................. ATCTTGACGATCGTGACATCCTGGTTATGACGGA 2373362 30 100.0 35 .............................. TACGGAGCCCGGCGAGCATATCGATGCACTTGCAA 2373297 30 100.0 34 .............................. TACTGATGAATAAATAAAGCTGATTCATTATCAT 2373233 30 100.0 37 .............................. TACGTGTGAGCTTGTCAAGTACTTGCGGCATATATCT 2373166 30 100.0 34 .............................. TTTCAAGTACCATCCTCCACACTTCGGGCTCTAC 2373102 30 100.0 35 .............................. CATCATGAAGCACGACAGGGGTGACTTCATGATGT 2373037 30 100.0 35 .............................. TGCTGTTGTTGAGGGAGCTGATGTCGTCATCCAGC 2372972 30 100.0 34 .............................. GGCCATCACGGGGCAGAAGAAGAACGGCAAGAGC 2372908 30 96.7 34 ...............C.............. GTGTGCATCTGGAAGACGAAGAGGTCGCGTGCCT 2372844 30 100.0 34 .............................. AAATTTATCCGGTGACCATCATCGTCATCATCAT 2372780 30 100.0 34 .............................. CTCGTACTGCTGATGATCGTGTAAAAGGTATTAA 2372716 30 100.0 36 .............................. TCGTACGGGAGGTGAAGGCGGGCGTGGCAGAAGCCA 2372650 30 100.0 34 .............................. GGCCATCACGGGGCAGAAGAAGAACGGCAAGAGC 2372586 30 96.7 35 A............................. TGAGGCAATACGGAAGGAGTTCGAAGACTGCAACA 2372521 30 100.0 36 .............................. ACTCTTCCTGGCCTCAGCCCCGCCCTGCACGAGTTT 2372455 30 100.0 35 .............................. CGCCGAGGTATTTGTCTGGAGTGTTTTTCAGCGTC 2372390 30 100.0 34 .............................. GACAAATCTCACCATCTGGGGTAAGGCGGTGTTT 2372326 30 100.0 36 .............................. ATGAAAATCACTTCGGGGTATCGGTGCCTTGAGCTT 2372260 30 100.0 35 .............................. CAGGATATCGGCGCGTAGGGGAGAGCGCGGCGGTG 2372195 30 100.0 36 .............................. TATTGCACGAAACGCGCACGCGGCAGCCATGAAAGG 2372129 30 100.0 37 .............................. TCATGCGCAGGAACCTCGATATATGCGTATATCGATA 2372062 30 100.0 34 .............................. TCTAAAAAACCCCGTCTACCCCCCCGCAGATCCT 2371998 30 100.0 34 .............................. TTTAAAGGAGGCATATTGCACGGACGGAATCAAC 2371934 30 100.0 34 .............................. GGAATAACGATTTTGTTCGCCGATGCATAGAACC 2371870 30 100.0 34 .............................. CGAAGCCGTAGGCGAGCGCCAACGGGGGCGGAGT 2371806 30 100.0 34 .............................. ATTGAGACCGAGATAAGCAAGTTCTTTGCAACGG 2371742 30 100.0 34 .............................. TAAGGAGTTGTAATTACATGCAATATGTCATTTT 2371678 30 100.0 35 .............................. GGACAAGCAGGAATACAAGCAGGATATCTTCTACA 2371613 30 100.0 35 .............................. GAATCTGGTCAAAGAACAAAGACAATGCGGTGTCT 2371548 30 100.0 35 .............................. ATACACTGTATTAAGCATAAGCCCGCAATCGTCGA 2371483 30 100.0 38 .............................. GAGTGTGTCACGCTTCTTCATCAGCTCTGCCTTCTTCT 2371415 30 100.0 34 .............................. AAAAGAAGGTCATACACTGCCAGTGAAGCCACCT 2371351 30 100.0 34 .............................. AAAATTAAAAGTGTCGAATTTTTAATTTTATTCA 2371287 30 100.0 35 .............................. TCCCATGCTCGAAGAGGGCGAGGAATACAACGGCT 2371222 30 100.0 38 .............................. GCGAAACAAAGATCATCGTCCGGATTAAACTTGGACCA 2371154 30 96.7 35 ............T................. AGGGTTTCAACTACGTGAAGCTGTCGGACCTTTAT 2371089 30 100.0 34 .............................. ACTTTAGATACTCTTTGGCTGTATCCTGACATGT 2371025 30 100.0 37 .............................. TGCGACATTTGCGCCCCAGCTGCTCGGCTGCTATCAG 2370958 30 100.0 34 .............................. CTGTTTATGCTTCACAGTGACAAACTGTTCAGAA 2370894 30 100.0 35 .............................. AGGAAGGAAGAGGTAGATAAGGACGGCATACCTTT 2370829 30 100.0 36 .............................. TCTTGTGATAATCATTTTTCTTATTCGCAAAAATAA 2370763 30 100.0 34 .............................. TATTATTATGATACTATCAATATTCTACTGTTAT 2370699 30 100.0 35 .............................. TTGGCTCACGCCCCATGTCCTCTATCCCCAGCATG 2370634 30 100.0 37 .............................. TGAAGCGCAGCCTCACGGAAGGATGAAGAAAGGCTCA 2370567 30 100.0 38 .............................. AACGGCGGAGCGGAGGCGGCGGCGAAGCGCCCGCAGCC 2370499 30 100.0 35 .............................. GTAGTCATGCGGCAGGATATCGGCGCGTAGGCAAA 2370434 30 100.0 34 .............................. ATGCTACTTTTAAATTTGTGTTTTTCACTTCTCT 2370370 30 100.0 36 .............................. GAGTTTGATAGTTTAGGTTTTGAGCCTGTTAGGTTG 2370304 30 100.0 34 .............................. TACTCACCGACAGCGAAATACTTGAAATTACTCG 2370240 30 100.0 35 .............................. TAGCTCTCAAGCTCCTCAGAACGCAATCCAGCACT 2370175 30 100.0 36 .............................. ATCAATATCACAAAGACGCTTGGAAGTGGAGAAATG 2370109 30 100.0 35 .............................. GAGCCCATACAGGTATCAAAAAGAATAGCTGTAAC 2370044 30 100.0 36 .............................. TGTTGAGAGAAGCGCCTTTACGCAAGAGCAGTAAGG 2369978 30 100.0 35 .............................. AAGGGTGAGGGGTGATTACATAGATAAACAACAAA 2369913 30 100.0 35 .............................. TTGATATGATTGATAATTTATACATTAACGAGTTT 2369848 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 136 30 99.9 35 GTTTTAATCGCACCTTTATGGAATTGAAAC # Left flank : GTTTAGAATGTACTGGTAGCTTATGTATGTGATATTGGTCTATGATGTCGGTCAGAAGCGGGTCGCCAAGATGCTTAAGCTCTGCCGGCAGTATCTGTCTTGGATACAGAACTCGGTCTTTGAAGGAGAGATCTCCGAGCCGAAGCTCCGTGAGCTTAAAGCCAAGATCCAAGACATCTATGAGCCGAGGGAGGACAGTGTGATCGTTTTTTCCAATAAGATGAGCTATAACATGGATAAGAAGATCCTTGGTAAGGAGCGCATGTCAACTGATAACTTCCTCTGAAAGTTGTCGATGTAGGTCTCAGCCGTCTCCTTATTTACTTCAACGACACACCAAAATGCTCTTTGACATGTTGAAACAATAGTAGATAAAGGGAGTTGTCGTAGACCGCCTTTCCTAATATTTTCTCACATCGACATGTTTTTTTGTCATTTTTCTGTATCTTTGCACTCACAAACCCCAGTAAACAGTGACCTTCGTCTTCTTGTCGATGTGG # Right flank : GGAACAGGAAGAGAATGCCAAGGCACTCTTTCATGGGTTTTAATGGCTCAGTACCAATAGTCCGTGGATAGATTAACTTTATTATCCGAAGATCGTTGCAACTCTGTACATGAAGAAAGGAAGGTCTTGTATACCTCTGACTTGTGCTCTGAAGCCCTTCGTCTTTGAGTTGAGGGACTCTGCAGAAGCATTGGTCGATCTGTTGTTAAAGTAGTTAAGAACTTCCTCCTCTCTGTACTTGATAGCATCCCTGGCTACTTTGATCTCACGCAGGTTGGAGTTAGCTACACGCTGATACCACTCATGCAGTTTCACTCTTGCAGTCTCCTTGTTAAGGCTCTTATCTCTGAAGATAGCTCTAAGACTGCACACATGTCCGTATGCTTCCTTTATCTTCGGATGCATGTCGAACAGCAGGTTGGCTCTTTCCCTTTGCTTCTCGCCCCATTTGTCACCGCTTTGCATAAGTAGGTACCGGCTCCTCGTAAGCAGTTCTACAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGCACCTTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //