Array 1 799305-797882 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013068.1 Pannonibacter phragmitetus strain 31801 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 799304 36 100.0 30 .................................... TCAGCCTGGAATCGGGCGGCAGCCGTCAAG 799238 36 100.0 30 .................................... GGCACAATGTCTGGAAAAGCGAAGATCGGG 799172 36 100.0 30 .................................... TGCAGCAGGCCTGATCAGGTCAACAGCCTG 799106 36 100.0 30 .................................... CGACTGCGCGCGCTGGGCCTTGTCGGCTAC 799040 36 100.0 30 .................................... TCTGGACGGCATGTTCACCCCCGGCGATGG 798974 36 100.0 30 .................................... CACGCCCCGGATCGTGATCTCATCCGATCC 798908 36 100.0 30 .................................... GAGCCCTGAAGGGACTCGTTACCTCTGGCA 798842 36 100.0 30 .................................... CAGATGGCACCGAAGTGCAGGTGCCGGTGG 798776 36 100.0 30 .................................... CAGCCCCGCCACCGCCGAAGACCGACGAAA 798710 36 100.0 30 .................................... GCGGCGCCATCTCTTACCACCTTCCGTGCC 798644 36 100.0 30 .................................... ACGTTCGTGGCGGTGTTGTGTGTTGTTGTG 798578 36 100.0 30 .................................... CCGCCCGACCCCGCATGGCTGGCGCTGGCG 798512 36 100.0 30 .................................... TGGTGGGCGCAGCGGCAGGCATCGCCATGG 798446 36 100.0 30 .................................... TGTTGTAAGATTATTTCCTGGTCTTGGAGC 798380 36 100.0 30 .................................... TCGCGGAACTTCACCCATCCGATCTTCGGC 798314 36 100.0 30 .................................... GCCTCGGCGGCTGGCGCGGATCGCATTACT 798248 36 100.0 30 .................................... CGGAGATGCGCGGCAGTGACGAGGCCCGCA 798182 36 100.0 30 .................................... GCGTTCTGTGTGTTCCGGAGTCCGCGCTGG 798116 36 100.0 31 .................................... GGACGTTGATTACTGGTCGCTCAAGGCCCTG 798049 36 100.0 30 .................................... CGGCGGTAATCCGGGAACGTGCCATCGATC 797983 36 100.0 30 .................................... CCGGCATGTGGGTACACCTGCCAATTCTGC 797917 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 100.0 30 GTTCCGGCTGGACCGCGATTTCTGAACTGATAAGCT # Left flank : AGTCCAAGAGCCATGGCGCCAGCCGCCAGCCCCAGAGCCATACGGCGCGTGATGTTAAGGTCCTTGATCATTCAGTCCTCCCGTAGATGCGTTACAGCGCTGCCGGACATGGCCCGTGGCGAGCGCGCCACCGCGCTTGGTATCTCCTCCAAAGCCCGGCAAGGCTCCGGATCATTAGGCATCTTTCCTGTCCGGAACCTGTCCGGATTGTAAAAAGATGCGCTCCATGCGTGATGTTCTCTTCAGATCACCCCGCTCTTCGCTGGAGCACCAAGAATGTTGTGAAAGATCGTGCGGCCAAGGTCAAGCATCTTCAAGGCCTCGGCCCGGGCGGTGAAGTGCATCCGGCGAGGCGGCGGAGCGACATATTGAGGGCGTGAATCAAACATCAGCGTTACCCGATGGTTATTGTTGAGCCCTCAGGACAGGAAAGCCCCGTTACGTTTCCTTAGCCAGATTTAAACGGGGACGCCCATATTGCGCCGCAAATCCCGCCTGCC # Right flank : AGGTGCCTGTCCAATTCCTTGAAATAAAAGGGGAATTGGGCAGTTCACTGTGCGCAAAACGGCCAGAACCATCAGAACAGGGCGAGCTGTTCCGGGTTTTTCTTCCGCTTCTTGCGGGCCTGATCCGAGAATCGGACGATGTTTTCATACTGGCGGTCCGTGAACTGGAAGATGTAGATATCGCCCCATTCCGGCAGCGCCTGCTCGATCTGGCGGACATAGACGTCAAACTTTTCCTTGCCGCTGCAGAATCTCAGGTAGTTGGAAAGTTGGCTCATTTCGAAGCCAATATCCAGCAGAAACTGGCGGAATTTGGTAGCCGCGTGCCTCTGTTTCTTCGTCTCGACCGGCAGGTCGAATGTCACAAGCATCCACATGATCCTGTATCCGCTCAAATGGGTTGCGCCGCTGTTGGCCCTGAGGTTCCGCTTGTTCATGTCTCCTCCACATCCTCCCGGTCAGCTTCTGGCTCTGGCTCCCGGGGCCTGCCGAGTGTCTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGCTGGACCGCGATTTCTGAACTGATAAGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCGCGTTTTCTGATCTGCTAAGCT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 2 3363019-3365151 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013068.1 Pannonibacter phragmitetus strain 31801 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 3363019 31 100.0 34 ............................... TGGAATATGACCTGATCGCGGCCTGCGAGTACCC 3363084 31 100.0 35 ............................... ATGTCAGGCCACCATCATTTTGCGGGCAGCATCTG 3363150 31 100.0 32 ............................... ATCTCTGTCTCCTGTCTCAACCGCAGCTTCAT 3363213 31 100.0 37 ............................... TGCCGAGATTGGAGGGAGCAACGACAACGCTGAACCA 3363281 31 100.0 35 ............................... TTTTCACACCGACGCTGGAGGTTGAAAGGCGCGAG 3363347 31 100.0 35 ............................... ATCACTAGCGTCCGATACCGCGAACAGCAGGGGAG 3363413 31 100.0 34 ............................... CGTGGAGGTGGAGCGCCGGACCTTGAAATCGGAT 3363478 31 100.0 34 ............................... TCCAGCCGCTCGACAACCGGAGCCAGCGGCCCGG 3363543 31 100.0 36 ............................... TGGACATGCGGAGCGCCAAACAAAAGCAACCCGCCC 3363610 31 100.0 35 ............................... GTCTTTCAGCACGCGATAGACAACGTGCAAGACGG 3363676 31 100.0 35 ............................... AGTCATGATTTTGTCTCCTGTTTGCTGGAACTAGG 3363742 31 100.0 36 ............................... AGTGCGCCCCAGATGCAGATCCTGCGCCAGGGCGAA 3363809 31 100.0 35 ............................... GCTGGTTGTCACCTCGGCCGGAATGGGCTCGCCCG 3363875 31 100.0 36 ............................... CGCAAACTCCGGATGCCCGGTCAGGGCCTTGTGAGC 3363942 31 100.0 34 ............................... GGCGGCCTTGCGGTTGCGGTACTGCACATCGCGC 3364007 31 100.0 35 ............................... ATCCTCCGCCCAGCGGGTGCCGTCATAGACGTGCC 3364073 31 100.0 35 ............................... AGTAAAGCGCGCTTGGGCTGAGCCGAAGGCAAAGC 3364139 31 100.0 35 ............................... GGCCAAAGGCCAAGGCCCTTAACGGGCATACGGGA 3364205 31 100.0 35 ............................... CGGTATCAGCAGGCCCTTATCAATGACCAGCGCGA 3364271 31 100.0 35 ............................... CATCGAGCAGGAGAAGAAATCCTCGGTCAGGGCCA 3364337 31 100.0 34 ............................... ATGCCAAGCCGACCGATCAGGTCAATACTGCCTA 3364402 31 100.0 34 ............................... ACTATTTGGGAGTTACGAGGACAGGCGCACCCTA 3364467 31 100.0 34 ............................... GGTTGCAGCGAACTACCGACCGGGAAAACACTGG 3364532 31 100.0 35 ............................... TCGTGACAGGTAGGGTTTGCGCGGCATCTGGCTCA 3364598 31 100.0 34 ............................... CCATCTCTGATGCGCCGCCTGGAACTGTGGGCAG 3364663 31 100.0 34 ............................... TGCACGTCCAGCAGGCTGCGCTTGGTCGGCCGGA 3364728 31 100.0 34 ............................... TCCATCGTCACCGCAAACGCCTCGGTTGGCGGCG 3364793 31 100.0 34 ............................... CGCGACCGGATCATAGTCAAACGCCGCCTGAACG 3364858 31 100.0 35 ............................... GCTTTGGCGCTCTGCCGGGCGTGTCGTCGAGCGTG 3364924 31 100.0 35 ............................... CGAGAGGATCAGCGGGTGCCCGGCCTGCGCCTGCG 3364990 31 96.8 34 .........................T..... TGGGCCTGGCCGGGCTTTGGCGCGGGCGGCAAGG 3365055 31 100.0 35 ............................... ATTATTGAACAGATTACCAAACCGTTGTTCCGGCG 3365121 31 80.6 0 ......T......C..........GG..GG. | ========== ====== ====== ====== =============================== ===================================== ================== 33 31 99.3 35 GTCGCCCCCTCACAGGGGCGCGGATCGAAAC # Left flank : GTCCCGGCGGGGCAGGGCGCCTGCGCCGTGTTGCCAAGGCCTGCCGCGACTATGGCCAGCGGGTCCAATATTCGGTTTTCGAGATCGAGGTGGACCCGGCACAATGGACCATGCTGAAAGCCCGGCTGGAAGGTATCGTCGATCTGGAAACGGACAGCCTGCGCTATTACTATCTGGGGGCGAACTGGCAGCGCCGGGTGGAGCACGTGGGCGCCAAGCCCGCCGCTGACCTCAACGGCCCGCTGATCATCTAGGGCAGTTCGTTGCACCTGCGCACGTGGCCCGGTGCGGCGCAGCAGGCTTTTGTGCCGGGCGCGAACCTGAAGTGTGACTCGTTTCCCCGGCAGGTTCGCGCTCCGCCCCGCTCTTTGACATTGCTGTCTTTTCTGCCGCGCTCTGTGCCGCGCTGCCTTCGCCTTCGATCCTTGTCCACCCTTTGCCCGCAGGATCGCGCTGCGGGGCGGAATTGCATTTTGCGGCCAAACTGTTAGGACTAAACA # Right flank : CACCACAAAAACAAAAAAAGGCCGGAGCGGTTGACGCTCCGGCCTTTTTCAAACGCTCACTCCAACTGCATCAGGCGGCTGTCGTGGGGATGCCTTTTTCGGTGAAGACGGCCTGGAGTTCCTGATTCTGGAACATCTCGCGCACGATGTCGCAGCCGCCGAGGAATTCGCCCTTGACGTAGAGCTGCGGGATCGTCGGCCAGTTGGTGAAGTCCTTGATGCCCTGGCGCAGGTCAGCGTCTTCCAGCACGTTGATGCCCTTGTAGGGCACGCCGATGTAGTCGAGGATCTGAACGACCTGGCCGGAGAAGCCGCACTGCGGGAAGTTCGGCGTGCCCTTCATGAACAGCACGACATCGTTCGTCTCGACTTCGTTCTTGATCCAGTCCTGGATGCTCATTGCCATGTCCTTCCGGGAGCCTTGTCCCTGATGGGCCGGGCTTGGGCCGGCCTGTGCGTTTTACAAATCAGCTGCGGGCCTGCGCCTTGCGGCACCGGCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACAGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 4418259-4415673 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013068.1 Pannonibacter phragmitetus strain 31801 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 4418258 31 100.0 35 ............................... GGCCCCGGAGATAGGGGCGAGGCTTTAATGACGCC 4418192 31 100.0 36 ............................... GGCTGCACCGTGCCCGTGTCGAGGCCGCCATTGCCG 4418125 31 100.0 33 ............................... GGGGCTCTGCGCCCTGCCTCAAACCAGCCTCAG 4418061 31 100.0 34 ............................... GATGACACCCTCGGTCCACGTCTCGACAGTCGTC 4417996 31 100.0 35 ............................... GGACAGGCGCAACCCTGTATCGGCAATCAGATAGA 4417930 31 100.0 34 ............................... TGCCGCCGGAAATAATAGGTCTTCGCCCGTCCAA 4417865 31 100.0 35 ............................... AAGGTTAAGGTTTCTAGATACAAAGCGAGCGACAA 4417799 31 100.0 36 ............................... AAGTGGTGCGGCGCGCTCAAGCGTTTGGGCGGACGC 4417732 31 100.0 37 ............................... CGGCTGCGGCACCGGCTGCCCCGTCGCCCGGTCCATG 4417664 31 100.0 35 ............................... CGCCCAACCCGCCAAGCCCAGGCGCCTGTTGCGCG 4417598 31 100.0 35 ............................... CCATGTCGTGCGATACGTCGAAAGTTTGTCAGTGC 4417532 31 100.0 34 ............................... ATGTTCGGACAGGGTGCCGGAGGTCCACGTGGCA 4417467 31 100.0 33 ............................... GGTCAAGCTGCCGCCGTCCGTCGCATAGCGCTT 4417403 31 100.0 34 ............................... CAAGCGAAATCGGCAGCAGTAGAAGCCAAACCAC 4417338 31 100.0 33 ............................... TCCGGCGCGGTCGCCCCGCCGCCGAGATCCCGC 4417274 31 100.0 35 ............................... CGCCATGAGGCACGGCGCCGTGCAGATGAATGAGC 4417208 31 100.0 34 ............................... TCGCAGAGATTGGAGATGCCGAACAGGCAATCTA 4417143 31 100.0 34 ............................... AAGGCAGAGCGGGCGGAGCAGACTGAAAAATGGC 4417078 31 100.0 37 ............................... CGCTCAGCGCAAAATCAGTGGCTTTGCACGTTCGAAA 4417010 31 100.0 35 ............................... ATCTACGCATTCCTCTATGGCGCTGGTCCTGAGCT 4416944 31 100.0 34 ............................... AACACCGACCTGCGCCTTAGACGCCAAGAGCAGA 4416879 31 100.0 35 ............................... CTCATTCGGCGCGGCTCCCTTCTCTACCTCGAAAC 4416813 31 100.0 34 ............................... AGCTTGCCGGACTGGATGTCGTCGGCGATGGTGC 4416748 31 100.0 33 ............................... TATGCCCCTCGCGGCTGTCATAGCCGCGCTGCG 4416684 31 100.0 34 ............................... TTGCGCAAGCGAATGCTGGAGACGGGCACCTACA 4416619 31 100.0 35 ............................... AGCCCGGCCTCGATGTTGACGGCGTTGCTGGGCCC 4416553 31 100.0 33 ............................... TCGAGATCCGGCGCGCCGCCGAGCTGCGTGCGC 4416489 31 100.0 35 ............................... CCAATCGACGGCGCGCCAATGCTCGCGCGCGCCTT 4416423 31 100.0 38 ............................... CAGCGCCTCAGGGACAAACTTCGTGACCGCGTGAGCCT 4416354 31 100.0 35 ............................... CCAATCGACGGCGCGCCAATGCTCGCGCGCGCCTT 4416288 31 100.0 34 ............................... ACTGGGGTGACCGGGTCGGTGAATCCCCGCATCG 4416223 31 100.0 36 ............................... AGGATTATGTTGACGTTCGCTTTGGCGCTCTGCCGG 4416156 31 100.0 33 ............................... AGGTGGTAACACTGGAAAACGGCCTCCTGCGTC 4416092 31 100.0 34 ............................... TCAAGCCAGCCGCGCCGGGAGTCTGACCGCTCCG 4416027 31 100.0 34 ............................... CCGGCCGTCAGCGTGGCACCGGCCGTGCCGGTCC 4415962 31 100.0 33 ............................... GTCCTGACTGTATTCCACCTGCCCGCCAGCCGG 4415898 31 100.0 33 ............................... CCGGCCGTCAGCGTGGCACCGGCCGTGCCGGTC 4415834 31 100.0 35 ............................... GACATTCAGATGCTGGGATGCGAACAGCATCAGGG 4415768 31 100.0 34 ............................... GATGAGCACAAGGTGATGCTCGGCTTCCCCTCAC 4415703 31 96.8 0 ..........................T.... | ========== ====== ====== ====== =============================== ====================================== ================== 40 31 99.9 35 GTCGCTCCCTCACGGGAGCGTGGATCGAAAC # Left flank : CCAGCGGGTGCAGTTTTCGGTGTTCGAGATCGAGGTCGATCCCGCCCAGTGGACACAGCTGAAGGCCCGACTTGAAGGGATCATCGCGATGGAAACCGACAGCCTGCGCTATTACTATCTCGGCTCGAACTGGCAACGCAGGGTCGAGCACGTGGGTGCCAAGCCTGCAGTCGATCTCAACGGGCCGCTGATCGTTTAGAGCCGTTCCGGCAAAAGCTCGACGCACTGCGGCAGCCGGACTTGAGCAAGTCCGAAGCGTGCCAGAGCTGCCGGCCTTCTGGTGCCTGCCCACGCGTATCGGCCGCACATTGGCGGCGCGTCCGCGCGAACCTAAAGCGTGCCTCAAAACCCGCACCGGTTCGCGCTTGTGCCAGCTCTTTGAAAACATGGAAAAAATTCCGGGCAACATGCTTGATCAGCCTGCTTCACCGGATCAGCATCCGATGTTTCGCGCAGGCAGGCCGATTTGCATTTAGTGCACAAGCTGTTAGGACCAAGCC # Right flank : GGCAGTAAAGTGCCTAACATAGTGATCCGTCAAAGTCGCTCGCGTATGAGCGCGGCGAGACCGTCCGGCAGTTCCCTTTGCCGCTCTCCTGTTCGCGCGGGAACCGCACGGCCACGCCTGCGAGTTGTTTCTGGGTAAGCTGCTGACGCTTCCGCTCAGTCCGGATCAACTGGCCAAGCGCTACGCTGTCGAAGACCGTTGTTATGTGAGTCATCCCTTTCGGGACGATTAGCGCTTGAGCTTTCGACGGCACACCAAAATCATCCTGATCGGGACTCGATGGAATCTGCAGCAGGGAAAGGGAATGCAGAGCGTGGCTGCCTCTTGCCTGGGGCGGCCTGATCCGGAAAAGTGGTCCGGAAAACTGTTCCGGTAGCGGCCTGTGCCGATTGCCTAATTATTTGAAAAATATGGAAAATTAGATAATGGCTGGGGAACCTGGATTCGAACCAGGACTAACGGAGTCAGAGTCCGTGGGTCTACCGTTAACCTATTCCCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTCACGGGAGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTCACGGGGACGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //