Array 1 60670-62634 **** Predicted by CRISPRDetect 2.4 *** >NZ_VVXN01000022.1 Bacteroides caccae strain BIOML-A1 scaffold22_size87032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 60670 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 60747 47 97.9 30 ..............C................................ ATAACAAGAACGGGGAAAGTGATAAGGCCG 60824 47 100.0 29 ............................................... TGGCAGATGGTAATGACGGCACGGACGGT 60900 47 100.0 30 ............................................... AATTCCAAATATTTCGAACTATGGAAGAAG 60977 47 100.0 30 ............................................... TACGATAACCAGAAGATTGAGCATCATACA 61054 47 100.0 29 ............................................... AAACAACAGATAATCCAGATGCATCCGTT 61130 47 100.0 30 ............................................... ATTGAAAGTGTATCAGCTGCGATAGTCCCG 61207 47 100.0 30 ............................................... ACGATAAGTCATGCCATTCCGATAACGAGT 61284 47 100.0 30 ............................................... TCACCAAATTGTGTATCCGGAAGAACGCCC 61361 47 100.0 30 ............................................... TATTACACTACAAAGATAAGGGAATATAAG 61438 47 100.0 30 ............................................... GCAGCACCAGCAGCAGTTGCAGCAGAAGTA 61515 47 100.0 29 ............................................... GCCAGCTTGAGAACCAAGAACATCCTTGT 61591 47 100.0 30 ............................................... CAATCGGCATTTCTTTTGGGGCATAATAAC 61668 47 100.0 29 ............................................... TTGCAGAAAAAGCAACCTTAGACGAAAGG 61744 47 100.0 30 ............................................... GATAAAAAAATAATATAATCATCAGAAAGA 61821 47 100.0 30 ............................................... AAAACGGTAAATTCAATAACAGTGAGATAA 61898 47 100.0 30 ............................................... CCGAAACCTATCAACATATTAGTGACGTGT 61975 47 100.0 30 ............................................... TACCATTACGGACAAAGAGTACTCGCTCAG 62052 47 100.0 29 ............................................... GTATCAAAGGCGGATTGCTTGTAACCCTC 62128 47 100.0 29 ............................................... GGTTAATAAAGATTATTCTGTTCGTGTGT 62204 47 100.0 30 ............................................... AGAATTACTATGAAGTACATTATATTCGCG 62281 47 100.0 30 ............................................... AGAGAGGCCGGCGTCCCAATGGGAGTGGAT 62358 47 100.0 30 ............................................... TAAAATACCAGCAAGCCAAATCTGAAATTA 62435 47 100.0 29 ............................................... TAAATTGACAGAATCTTTTTCTGAATTTG 62511 47 100.0 30 ............................................... ACACAGGCAATAACTCTCCGACTTTTGCCG 62588 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 26 47 98.9 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : TTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATACAAAAAAATGTATGAATTGAATAATTTGAACTATAGAACAACATATTATGGTATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : CACAATCGCCATTAGCCGCTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //