Array 1 12612-12820 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAFMY010000065.1 Staphylococcus aureus strain 26-028 NODE_67_length_13187_cov_10.3596, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	===============================	=============================	==================
     12612	    31	 100.0	    29	...............................	AGCTGACAGCAAGTCAGCATACAATAATG	
     12672	    31	  93.5	    28	............G..............T...	GAATTTCAAAAAGAAATTCTACAGACAA 	
     12731	    31	 100.0	    28	...............................	AGCTGACAAAAGTCAGCTTACAATAATG 	
     12790	    31	  96.8	     0	...........................T...	|                            	
==========	======	======	======	===============================	=============================	==================
         4	    31	  97.6	    29	TGCAAGTTGGGGAACGGGGCCCCAACACAGA	                             	       

# Left flank :   TATCGCCATAAGGATAACGGTGTTCAATTTGGTTTGATTACAAGTGTTTCACAATCATTTTGTTCTACATGTACACGCGCAAGGCTGTCATCAGACGGGAAGTTTTACGGATGTTTATTTGCAACTGTCGATGGATTTAACGTTAAAGCGTTTATTCGTTCTGGCGTGACCGACGAAGAATTAAAAGAACAATTTAAAGCTTTATGGCAAATAAGAGATGATCGATATTCAGATGAGAGAACTGCTCAAACAGTTGCCAATCGTCAACGTAAAAAGATAAACATGAATTATATTGGTGGTTAATGTGTAGGAACCACTACATATTAAATCATTAGAGATTCTTTAATATTTCTGTCTTACTCCCTAAAATACAATATTATTTATTAAAGTAAAAACGGTCATATCTATGCCAGATTTAATAGAAATGATCGTTTTTAATGTTTTTACAAATCGGCGGGGCCCCAACACAGAAGCTGACAGAAAGACAGCTTACAATAATG
# Right flank :  GAATTTCAAAAGAAATTCTACAGACAATGCAGGTTGGGGAACAACGAAATAAATTTTATGAGAATATCATTTCTATCCCACTCTTAAGAATCACTACATAATAAATCTTTAGTGGTTCTTTAACATTAGTGTCACACTCCATGCCATTGAGTTGTAATATATCTTTTTTAGGTATAAATGTTGTCGAATAAACAACAAGTTGTCCAAAAGATATAAATCTAAACAAGATATAGCCAGCAATTTAATATTTGTAATAGATAAAATATGCATCTTATACACATCTGACGCAGCCGTCGACTCAACAGGCGTAGATATCTGACTTCCCAGAACAATCAAAAAAATAAAAGTCACCAGAATCAAACAAAAA

# Questionable array : NO	 Score: 2.54
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TGCAAGTTGGGGAACGGGGCCCCAACACAGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [9,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-11.20,-10.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [2-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.74,0.27   Confidence: MEDIUM] 

# Array family : NA
//