Array 1 46682-44434 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIO01000037.1 Rhodanobacter lindaniclasticus strain DSM 17932 DSM-17932_S8_L001_R1_001__paired__contig_37, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 46681 37 100.0 30 ..................................... GATCGTTCCGGTGTAGACGACGGCGCCGGT 46614 37 100.0 30 ..................................... GGTGTTCGGCGACGTGACCCATGCCGCGTT 46547 37 100.0 30 ..................................... TCGGGGTAGCCGGCATAGGCCGCGCCGCGA 46480 37 100.0 30 ..................................... TCGACGGGCATGTCGGTTTCGTCAGCCAGG 46413 37 100.0 30 ..................................... CGACCTGACGCTGACCCAGCTGCAGGCGCT 46346 37 100.0 30 ..................................... TAGCCGTGCAGTACCTGCGGTGCGGGGTAC 46279 37 100.0 30 ..................................... CGTGGCGGCGCTCGCAGGGGTTGGGGCTGG 46212 37 100.0 30 ..................................... GGACTCCTGCATGAACATCCGCTGCAGGAT 46145 37 100.0 30 ..................................... TAATATGTCGTCTTGCACTTGGGCAGGTTG 46078 37 100.0 30 ..................................... TTTTTCGCCGATGGTTTCTTCGCCAGCTTC 46011 37 100.0 30 ..................................... ATGTCCGGGGAAGACTGGACCACGGTCATC 45944 37 100.0 30 ..................................... ATGAGTTCAACTCGATCATGGAAGGCGCGC 45877 37 100.0 30 ..................................... GTAGTGGCCATAGATGGCCATGATGGCCTC 45810 37 100.0 30 ..................................... TGGCCCGCCTTGAGCTTCGTGCGGGTCAGT 45743 37 100.0 30 ..................................... GACGTGGCGAACATGGCGATGATGCTGCTG 45676 37 100.0 30 ..................................... TCCCGAGTCCGCCACGTCGATCAAACGTGA 45609 37 100.0 30 ..................................... ATGACGCTGGCCCTTTCGCCGGAGCGTGAG 45542 37 100.0 30 ..................................... TGTCGAACTGCGCGATCGGCAGCTTGGCGT 45475 37 100.0 30 ..................................... TAGGTTGAATCGGCGCATCGCAACCTGTCG 45408 37 100.0 30 ..................................... TACATGCTCAAGCACGACCTCAAGCTGCCC 45341 37 100.0 30 ..................................... ATGACGCTGGCCCTTTCGCCGGAGCGTGAG 45274 37 100.0 30 ..................................... GTCTGGGTGCTGGTGAAAATGTCGATGGGG 45207 37 100.0 30 ..................................... GTAGGCCTTGGCTTCGTCGCTCACGACGAC 45140 37 100.0 30 ..................................... GGTTGTCTGGATCAAGCCGCGACCGCGAAA 45073 37 100.0 30 ..................................... CAGGTAGGCCGCCACGGCCGTGTCCGGGTA 45006 37 97.3 30 ...........G......................... CGGCGATCTATCTTGGCGCGACGAAAGTAT 44939 37 100.0 30 ..................................... CGTCGGCGCTGGTGGTCCGACCGGGCTGGA 44872 37 100.0 30 ..................................... GAGCGCGAGGAACTGGCCCGCATGCGCGCC 44805 37 100.0 30 ..................................... AAGACCCGTGGCCAGCTCAAGCGCTGAGTA 44738 37 100.0 30 ..................................... TGGCCAGGGGCAGCCTGCTCGGCATCGCAC 44671 37 100.0 30 ..................................... GCCCGTCGCGAACCAGACGTCAACATCCGT 44604 37 100.0 30 ..................................... ATCCGTCTGCGCACTCTGCACCGCGTCTTG 44537 37 100.0 30 ..................................... TCGGGATTGCTTGCGTGGATCGTGCGATTC 44470 37 97.3 0 ...................................G. | ========== ====== ====== ====== ===================================== ============================== ================== 34 37 99.8 30 GAGCGTAACAGATCAGGAAATGCGCTCTGGCCGGAAC # Left flank : AAATGCGCTCTGGCCGGAACAAGCGGGCGAAGCGCCAGTTGATCGCCAT # Right flank : GATCGGATGCATTTCAGTGGCCCGTATTCTTGCAATCAGCCGACCTCGATTCTTTCAATCAGCCGCCGTTGGCGGCTGCTCCTACTCACCCCATCGCGATTTTCAATTCCTCTCGCTCTTCTGCGCCAGACCCTTGGCGACCGCCTCGTCCAGCAACTGCGCCATCTGCTGCTCCGCCTTGGCCGAGGCTTCCTGCTGGCGTTCGCCGAGGGCGGCTTGTTGCTTGCCGAGCGCGGCCTGTTGCCGGCCCAGTTCCGCCTGTTGGGTGCCCAGGGCGCTCTGGCGTTCGGCGACGTCGGGTTGCTGCTTGTCGAGCGCGGCGCGGGCGGCGTCCAGTTCGCGCTCCCGCGCGGCCAGGGCGGCGGCGGATTCGCCGGAGTGGGAGCTGGCGGCGAAGGCGGCGCGACGGGCGGCCAGTTCGGCGGCTCGGCCGGCCAGTTCGGCCTGTCGTCCGGCGAAGCGGCCCTGCTCGGCGGCGATGCGGCCCTGCTGTTCGCCCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGCGTAACAGATCAGGAAATGCGCTCTGGCCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //