Array 1 289333-297643 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMYR01000002.1 Alishewanella tabrizica strain KCTC 23723 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 289333 28 100.0 32 ............................ TTGGGGCAATAACAATGAAAATGGCAGTATAC 289393 28 100.0 32 ............................ CTGTTGACGGGTCTATAGATATTGTTGGGGTG 289453 28 100.0 32 ............................ AAGCTGGCGCGCGATCCATTCCATTGGTACGT 289513 28 100.0 32 ............................ AATGACGAGCTAGTGGGGTTTTACGACTACGG 289573 28 100.0 32 ............................ AAGCAGTTTAATGAACGAATTGAACGGATGGC 289633 28 100.0 32 ............................ ATCGAGTCCATGCCGATAACGTTAACGGTCGG 289693 28 100.0 32 ............................ AGATGCGTCTTGTATCTGTTGCAGCGTAGACC 289753 28 100.0 32 ............................ CTGGCTGATAACCCACGGCGGGACATGATGGC 289813 28 100.0 33 ............................ CGCGCTATAGCGGAGTGTGAGGCAAGGATTAGG 289874 28 100.0 32 ............................ CACAACAACTAAGACAAATGGCAGTAGAATCG 289934 28 100.0 32 ............................ GAAATCACAGCAGAGCGAGGCGTGGCTCAGTA 289994 28 100.0 32 ............................ CGTTTCGCTACGCTGTAATCTATAACGATAGC 290054 28 100.0 32 ............................ AGTTTACGCGCCAAACAGCATAAGTGTCACCA 290114 28 100.0 32 ............................ AAGCCACTCGCGCGGAACTTGCGCATCATAAG 290174 28 100.0 32 ............................ AACACCCACCGCGCAAAGCCCTGCCAATAAAG 290234 28 100.0 32 ............................ AGTTGCGCGGCAAATGGGAAGCACCCGACCTA 290294 28 100.0 32 ............................ AAGGTGATGCTAGGCAAGCACGGCTACTCAGA 290354 28 100.0 32 ............................ AGCCACAGCAATGGTCACACCGCCATCATCCT 290414 28 100.0 32 ............................ AGCTAAACAGTCAATACCAACACCACCAACAA 290474 28 100.0 32 ............................ TTAGCATCAAGCGGTGCTGTAACCTTTACCGC 290534 28 100.0 32 ............................ AGCAAACGAGAATAAGCCCCCTTCGATGCTTA 290594 28 100.0 32 ............................ CTGTAACACCCCATCAAGATAAATACTTACTA 290654 28 100.0 33 ............................ AATACCGCGCCAACTGCTGCCAATTCTGTACTT 290715 28 100.0 32 ............................ CGATGGGGCCAAGCAACAGTGTTAAAATAAAG 290775 28 100.0 32 ............................ AATACCAGCGCCTTTAGCTTTGAACCCTTTAA 290835 28 100.0 32 ............................ TAGAAACAAGCACAGGGCTATGATGATGATCC 290895 28 100.0 32 ............................ TTAAATATACCTCCCCCTGCTGGCGCTGGTTG 290955 28 100.0 32 ............................ CGTAGGCGTTAACCTGCCTGAAAGCATCCTCT 291015 28 100.0 32 ............................ ATCAATAACACCGATATGCGACCAATGCGATA 291075 28 100.0 32 ............................ CCTTGCACCTGCGCGTATCTCACTGATAAAGG 291135 28 100.0 32 ............................ TGCTAATAAAACAGGCATTCCGAAATAGCGGT 291195 28 100.0 32 ............................ GCTCAGGTGTTGTGCCGTCCGGCACTTCAATC 291255 28 100.0 32 ............................ AACTTAAAGCGCTATGCCGATATTGTGAAAGA 291315 28 100.0 32 ............................ TGTTATTGTGCGGCTCAGCGGTATTGACAAAC 291375 28 100.0 32 ............................ TCAATGTGATAGCTGCGCTCAAACCCGTAGGC 291435 28 100.0 32 ............................ TGCCAGTAACGCCACCAGGCATCCTTAAATAT 291495 28 100.0 32 ............................ ACTAACCATAAACCATTAGAAGAAAAGACTCT 291555 28 100.0 32 ............................ CATTGATGGGCGTGCAGCGAGTATGATTAAGT 291615 28 100.0 32 ............................ AGTCAATAGCATCTTCTTTCGTTGGGAACTTT 291675 28 100.0 32 ............................ AAGACACTATCATTCCGCAATTGGAGCTTTAC 291735 28 100.0 32 ............................ AGAGGAATGGTAAAGATTGGCGCTTCACGATT 291795 28 100.0 32 ............................ TTGGCTGTATCTTGTAACGGTTTCGCCTTGGC 291855 28 100.0 32 ............................ CGTGATGATATTGACACTGTGCGCCAGCGGCT 291915 28 100.0 33 ............................ AGAAATAATCAAAGGCGTAGAGCCTGAGTGTAT 291976 28 100.0 32 ............................ ATACAGAGAGGCGCTAATCAATAAAATAGGGC 292036 28 100.0 32 ............................ AGTAAGCCACCCACCACACCACCAAGCGATAC 292096 28 100.0 32 ............................ TTGACCGCCTACCGATTCAATAACGTTACCGC 292156 28 100.0 32 ............................ AAAAAAGATGGGAAGATGATCCAGAGTATTGC 292216 28 100.0 32 ............................ ATGAAGAAGCGCTACAGCAGGCGCGCGACTAT 292276 28 100.0 32 ............................ TGACCAGCTCAGCATGGCAGGCGTTCAGGTAG 292336 28 100.0 32 ............................ ATGCGCACAAACTTAGATTGTTTTTGTCTTAG 292396 28 100.0 32 ............................ TCGCCCGTTTTCATTGCGGTGTCGGCGTAAAT 292456 28 100.0 32 ............................ CAAGCTCGTTACCGCCTTCATAGCTACCGGTT 292516 28 100.0 32 ............................ TGGCGAAACAAGTGAGACCATCGAACAAAAAC 292576 28 100.0 32 ............................ AACAGTAATTACACTCTGGCTCGTTGTTATGG 292636 28 100.0 32 ............................ AAGGAAAAGTAAAACCCATAGTTGAAGAATTT 292696 28 100.0 32 ............................ AAAACGCAAACCACGCAATCAACAGAAATCAC 292756 28 100.0 32 ............................ ACAACGAAGCGCTACAGCAGGCACGCGACTAT 292816 28 100.0 32 ............................ TGCCGACAAATCAGGCGTACCGCTTATTGTGG 292876 28 100.0 32 ............................ ATGGGAAATTGTACAAAGCATTGTGAACACCA 292936 28 100.0 32 ............................ ACTAAAATCAGAGCGAGAGCGTTTTATTGATG 292996 28 100.0 32 ............................ TAGCCGACGCGGTTAAGCTGGCGGCAAAGTGG 293056 28 100.0 32 ............................ ATCATCAGCCCACGCCTGCCAAGGGTCTCCAA 293116 28 100.0 32 ............................ TGTGACAATCCAAACGGCCATTATGCTATAAA 293176 28 100.0 33 ............................ CATGAAAAAATCCGGCTAACAAGGCCGGACAAG 293237 28 100.0 32 ............................ AAGTCGAGCACGCTATCATCATGAACGCGCGT 293297 28 100.0 32 ............................ TATGCTATCGGCGCAAGTAAGTCAATCAGCAA 293357 28 100.0 32 ............................ TATCCGCGTTTTTTGACGGCACAGAATTACCG 293417 28 100.0 32 ............................ GTACTCGTGCGCGACAACCTGCCGGCGTAGCC 293477 28 100.0 32 ............................ ATTAACAGCGCTCACAGGCTTCACAGGGCAAG 293537 28 100.0 32 ............................ TTGACCACCCACCGATTCAATAACGTTACCGC 293597 28 100.0 32 ............................ TGATGGCGTTGTGGCTATCGGTGCGAGATTCA 293657 28 100.0 32 ............................ TACGCTGAGAACTTCCCTGCTCAGCCGAGGGG 293717 28 100.0 32 ............................ CTGAAAACATGGTCGGCTTTGATTCCAAAAAA 293777 28 100.0 32 ............................ GGAAAAAAAACCAACAATTGGCGCAAATATGC 293837 28 100.0 31 ............................ GCCATGCCCCCTTTATGGGGGGCATGGTGGG 293896 28 100.0 32 ............................ TGCTTAGCTATTTCTATGCGGAATTGCTCGAT 293956 28 100.0 32 ............................ CAACCATTAACCGCAGTAACTGGCTTAGTCGG 294016 28 100.0 32 ............................ TAACAGTTCAGGCATCAACAACGGCACGCTGA 294076 28 100.0 32 ............................ AATCCTGCAAGCCTGTTAACCGCGCCCAATAT 294136 28 100.0 32 ............................ GTACTAGGGCAGGGCGTAGCAGTCGACAGCCG 294196 28 100.0 32 ............................ TAGCCACTCGCGCGGAACTTGCGCATCATAGC 294256 28 100.0 32 ............................ ATGCCGCATCAAGACTGCTGATATTGTCGATG 294316 28 100.0 32 ............................ ATGAAAAAATCCGACTAACGAGGCCAGAAAAA 294376 28 100.0 32 ............................ GATCAGCAAGCCGCCCGCCAGCGCGGTACCGC 294436 28 100.0 32 ............................ CACCTGGGACGGGTAAGACTTTCACTGTTAAA 294496 28 100.0 32 ............................ ACTGCCGATAGGTTTGGATGCTGTGCCGTCAT 294556 28 100.0 32 ............................ GCTACCAACAAACGCGGCTAAATCGCTGTCCT 294616 28 100.0 32 ............................ CTGCCAGCCTAGCGTTACCGTTTTACCGATAG 294676 28 100.0 32 ............................ GTTACCTAGAATCTTATAGCGCTGTGTATTGC 294736 28 100.0 32 ............................ AACACTATGTTTTGTGGTGATTTTGTTTCGTT 294796 28 100.0 32 ............................ TAGCATAAACGTCGCGGCTTTGTACCATACGT 294856 28 100.0 32 ............................ ATGCCACCCTTGCTTTTCTTTTCGTCATTCAC 294916 28 100.0 32 ............................ AGAAAATATTAGCCGAATTTAAAACAGACCTG 294976 28 100.0 32 ............................ ATCGAAGCCATTGCGCAAATTGTTGCGGGCAT 295036 28 100.0 32 ............................ GCTAAGTTATTGTTAGTTGCATACTCTAGCGG 295096 28 100.0 32 ............................ GCTACAACAGCAAACCAGCCACACCCGCTGGC 295156 28 100.0 32 ............................ CTCAAAACGCAGTGATATTGGGCTTGCCGTAC 295216 28 100.0 32 ............................ GCTGGGCTGCTGCTGTAGCTGATGATCACGTT 295276 28 100.0 32 ............................ AAGCCTTTCCAGCCCACTGGCGGCAACTCCCC 295336 28 100.0 32 ............................ GTCAGGCACGTTTACGGGCGTTAAATGTAGCG 295396 28 100.0 32 ............................ TGCTAAAATTTGCAGCGTACCTGTACCAATCA 295456 28 100.0 32 ............................ TACATACTGCTCGCCTTGGAAAACTAGCACGC 295516 28 100.0 32 ............................ TACACAGAGTATCAGCGGCAGGATATACAGGT 295576 28 100.0 32 ............................ ATGACACAGGCAGGTCTGTAACGTTTGAAACG 295636 28 100.0 32 ............................ AACGGGTAGATTTAACCCTGTACCGCCTGATA 295696 28 100.0 32 ............................ GTACTGCTCGAAATTCTCCGCATAATGCAAAG 295756 28 100.0 32 ............................ ATCAAGGCGGCCAAATCTCCTACTATTTCCAA 295816 28 100.0 32 ............................ ATCAAGGCGGCCAAATCTCCTACTATTTCCAA 295876 28 100.0 32 ............................ AGCCCGACAGACAGCCAGAAACTTGACAATGC 295936 28 100.0 32 ............................ AGTTAATCGGAATGCCAGCAACTAAAGCCGCT 295996 28 100.0 32 ............................ GCCAAAGCCACATGGATTTACATTTGAAGATT 296056 28 100.0 32 ............................ ATGAAACCAAAGTTGACACCTAGACAATACAC 296116 28 100.0 32 ............................ TGCCCGCTGTACGTAATGATTATTGACCCGCC 296176 28 100.0 32 ............................ ACGCAGCCCAATCGAAGATGAGTGGGCAGACA 296236 28 100.0 31 ............................ AAACTATCAAGCGGCGGTCGTGCCGCATACC 296295 28 100.0 33 ............................ CATATCCGTTATCGGCTTGCGCAACGCCTTAAC 296356 28 96.4 32 ...........................G TATGCCGCAGGAGGCTGCACAAGGTGCAGAGC 296416 28 100.0 32 ............................ AAGCCGTGTAAGCGTGGATCGCAAGAGCGTTA 296476 28 100.0 32 ............................ AGAACCTCCACCAGTTGAGCCACCGCCACCAG 296536 28 100.0 32 ............................ TGATACGCCTATCATCGTTATCATGCAGCGAT 296596 28 100.0 32 ............................ TCCAATCAAAAAGCCCCGCCGAAGCGGGGCAT 296656 28 100.0 32 ............................ TAGTGCCACACAAACAAAGGCCCCGTTATTTT 296716 28 100.0 32 ............................ TAGTGCCACACAAACAAAGGCCCCGTTATTTT 296776 28 100.0 32 ............................ AGCCACGTATGCAACCCCGGGTGACATTCCTA 296836 28 100.0 32 ............................ ACCAACACTTAAACCAGATGATGCAGCGGCAA 296896 28 100.0 32 ............................ AACTACTCTTACCTTTGAGTAGTTGGTGTTAT 296956 28 100.0 32 ............................ GCCTTCGTCTTTGTGGTTTATCAGGTGACATT 297016 28 100.0 32 ............................ GGTAAACGTTACGTGTGATTGATTACCACAAT 297076 28 100.0 32 ............................ ACACTTAAATACTGCGAACGTGATCAAGATCG 297136 28 100.0 32 ............................ GTCGCCATCATACAGCGAATATTGCTTTTCTT 297196 28 100.0 33 ............................ CAATACAAATAATGGGGCGCTTGCTCTGTCAAT 297257 28 100.0 32 ............................ TACCACGATATTTATATTCTGTGGCGTATCTG 297317 28 100.0 32 ............................ TCTCTGTGATAATAACCGCAACGTATGCAAAT 297377 28 100.0 32 ............................ TGTGCCAGTTCGTTTTTGTTCAGCATCTTTGT 297437 28 100.0 32 ............................ GTCACGAACAATAGCTAAATAAAAATCATAAA 297497 28 96.4 32 .....A...................... TGATTGCGCTCGGTGATTGTGCCGCCCAAAGT 297557 28 96.4 32 ...........C................ TTTACCCAAACGGTGCTACTGTTGACTGGTCT 297617 27 78.6 0 G..........G.........-A...TT | ========== ====== ====== ====== ============================ ================================= ================== 139 28 99.8 32 CTTCACTGCCGAACAGGCAGCTTAGAAA # Left flank : CTAGAAAAGCTGATGGCTGAAAACTGGCTAAAAGGGCTCAGAGATTATTGTGATTGCAGCGCGTTACAGCCAGTCCCTGCCAATGCCAAACAGCGTTATTTTGCAAGACGGCAACTCAAAAGCGTACACAATAAACGTCAACGCTCTGTTGGCAAAGGTTGGTTAACGCATGATGAGGCATTGAGCAAAATCAGTGACGAATCAGAAAAAAAGCTAAAGCTACCATTTTTGCAATTAACCAGTCGTGGTAATAAGCAGCAAATGAAAGTGTTTATAGAGCAGGGGCCGGTAGTAGAGCATGCAATAGTAGGTAGTTTTAATTCATACGGTCTAAGTCGATTATCTGAAAAAGTAACAGTTCCTTGGTTCTAACCCTTTTTTGAGCAACCGCTGACAGCCCTTACCATATAAGGGCTGCTTTTTATCCTTATAAAAAGGGTAAATGACCCAAAGAGTCAAATGTTCTTTAATAATCAGGTTATTAGTGCTTAAATGCACTG # Right flank : TTTCCAACAATGCAAAACTGATCCACTTCAACAATTGAAATCTGATCCACTTATTTCTCTACCGGCATACATTCTAGAAATATATTATTATCAATTTATTGCATACCTAGCAGTTATAGTTCGCCTTGCCATGAGCAGGCGCGCGGATTTAGCAATTTTTTGTATAAGACTGTTTCTATACAAAAGCTTGCTTAAACCCGCCTATTGCTATTGTTTAAAGAGTATTTTCGAAATACCCACAATGCAAAACATTGAGGTTTTTATATCTTTATTAAATAAGGTTATTAATATTTTTCGAGCCTTACGAGTACGTTTATCGTCTGATCTGCGTGTTGCTAATACAAGCGCGGCGATACTTGTACTGAGTGAGGATAAGGCCAAGAAGCGACTGGCGAGGCAGTGTTTCGATGCCACTCTTGCCTGTTCTGGGCTGGTTGATGTTGAGTGGAGTTTGTAAAGGAATTCAAGCCCACCACGCAAAATCTGAGCTTTTAGCTAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGAACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //