Array 1 459-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_JURJ01000026.1 Streptococcus anginosus strain 83_SANG 90_7940_133781, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 458 36 100.0 30 .................................... TCAAGCAACGTTGTGCTTTATAACAAATAA 392 36 100.0 30 .................................... ACCCAGTTATGGATTATATGGAACAAGTTG 326 36 100.0 30 .................................... AGTAAAGTTATGAAACACATCAACGCTTTG 260 36 100.0 30 .................................... ATTGTTATACATCAGGAAATTTTGTAGTTT 194 36 100.0 30 .................................... TCAACCAATTCACGAACACGCTGTTGAAGT 128 36 100.0 29 .................................... TAATATGAAACTTACAAAATTCACATTGT 63 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Left flank : ACGATTACTTGAATTATTGCTCATTTGTAAAATGTTGCGAGCAACTAGAGGAGATGGCCGACAATTACAGTAATTTTAGTGTCATTATTTTCCCGTCAAATGAAGGCTATCTTTATTTGAATCGCGAGAATATGGAATACGTCAATATTGTTTCTGATTTGGTTGAACATTTTTATGAATTTTCTTTTATGTATGAAAGGTTTATTGGTCAATATCCTACTAACGACGTACCTACAGAAGATGATTTCATCGTCTCTTTGCAAAAGATTTCACCATATTTATTTAGTAAAGACGTGACACATATGAGTTTATCTATCCAAGATATGGTAACCTTGAAAATTATGAACAGTTTATACCATTACAACAAGAAAATTCATTTTGCTTATAATCCACCTACTCAATTATTAATTAATTTTTTAAAAAATTAAGATTGACAAGCTCATCAAAGGACTTTATAATCAATGTAAGGGTACAAAAATCAAAAAATTTTTTAATTTGAG # Right flank : CCATTTTTTGAAATGATTATTGAATACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 12005-8864 **** Predicted by CRISPRDetect 2.4 *** >NZ_JURJ01000035.1 Streptococcus anginosus strain 83_SANG 131_12031_197197, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 12004 36 100.0 31 .................................... CAATAAAGCAACATTGCAAGTTTTGCATGAT 11937 36 100.0 30 .................................... ACTATAACTAATTATAAGTTTTGACTATAT 11871 36 100.0 30 .................................... ATCTAAGTAGAGGCTATCTGTATCACAATA 11805 36 100.0 30 .................................... CTTTTGTCAAGAGATTTTAACAATCTCCTA 11739 36 100.0 30 .................................... ATAATAAATTGGTTAATATTCAGAATGGCT 11673 36 100.0 30 .................................... TATTTGTTTAGGAGTTCTTTAACCCCCTTT 11607 36 100.0 30 .................................... TTACCTCTACCTTAACCACCCAAAGCTTCA 11541 36 100.0 30 .................................... CTTCATGTTCATCAAATTCAGCAACTCGCT 11475 36 100.0 30 .................................... CAACCTCTTCTTTTATCGTTATTTTGTTAT 11409 36 100.0 30 .................................... AAGAAGTAAGAACAGAGCAACCTTCAAGTA 11343 36 100.0 31 .................................... TTGTTGATAGAAATAATCAGAGTGTTCATGA 11276 36 100.0 30 .................................... CTGGATAACTTAAAACTTGGTTATGGTGGT 11210 36 100.0 30 .................................... CTATCCAATCGAAACAGATGACGGTACGAT 11144 36 100.0 30 .................................... TAAAATAATAATTGGTTATGTTTTTAATAA 11078 36 100.0 30 .................................... AGGATTGACAAGTCTTATTTCACCTCCATA 11012 36 100.0 30 .................................... CACGGATACAAATGATTTAGTTTCTGATGA 10946 36 100.0 30 .................................... AAACAGGCATTTCAGCTTTAGCCTTCACAA 10880 36 100.0 30 .................................... AATGAAAGGATAAAATAAACATGCCTATTT 10814 36 100.0 30 .................................... TTTCAGTTTCTTTTTCATGTTGGTCTTTGT 10748 36 100.0 30 .................................... CAAATGTACCTGCTTAGACTCTAAGTCAGA 10682 36 100.0 30 .................................... GATAAATCAAAAAATTCTGAAAGCGACTTG 10616 36 100.0 30 .................................... TTCCAACTTATTTAGATGATTTTAAAGATT 10550 36 100.0 30 .................................... GCTTCCGACCTTTACAACGGTAAGCCTTGG 10484 36 100.0 30 .................................... TCATTCAAGTAACGTTGTGCTTTATAACAA 10418 36 100.0 30 .................................... AAAATATGGAAGTTGCTGCTTATAACTATA 10352 36 100.0 30 .................................... AGGTGAGGAAGATCTAAGTAACGAAGAACT 10286 36 100.0 30 .................................... TAATTCAATAAGATACATATCACGACTCCT 10220 36 100.0 30 .................................... TGTTGCAGCGTGAGCCAACTAATCCACATG 10154 36 100.0 30 .................................... AATAAGCCCTTTAATTTATCTCCTAATCCG 10088 36 100.0 30 .................................... CAGTGGAGACAGTGAATATAAAATTGATGG 10022 36 100.0 30 .................................... GAAAACGTGTTGATTATATCTATTCCATCT 9956 36 100.0 30 .................................... CATACCGTGTCTTGCGTAAGCATGCTGATG 9890 36 100.0 30 .................................... CTGCTTGAAGAACAAACGAAGCCAGCCGAG 9824 36 100.0 30 .................................... AAATCAAAAACATCAAAATCAAAGAATTGG 9758 36 100.0 30 .................................... AGCAGAGGGCAAAAAACGACAAGCGGCGCA 9692 36 100.0 30 .................................... ACTGGTTGGGCAATCACAGCTACCATCAAT 9626 36 100.0 30 .................................... TCCAAGCTGAAAGCCAAATCAAGCCACCTT 9560 36 100.0 30 .................................... TTAAACAAATTATAGTAAAATATTATAGTA 9494 36 100.0 30 .................................... AATTAAATTTTTCGCCCCTCCATTTCCACG 9428 36 100.0 30 .................................... ACAACAGGCTTGGAATAAGTACGTTCAGGG 9362 36 100.0 30 .................................... TATCGTATTTAATGATAAAGAACGAGTTCT 9296 36 100.0 30 .................................... GCTGATTTTACAGGAAAAGCCAAACAAGAA 9230 36 100.0 30 .................................... TGCAGACACCAAACATAACAACTCTGCATC 9164 36 100.0 30 .................................... CCGTAGTCTGTGGTATCGATTATATCCCCC 9098 36 100.0 30 .................................... AAGCAACACTCGATAAGATTATTAAAGAGC 9032 36 100.0 30 .................................... TCATTACGATTGCAGACAACAAACCTGCAG 8966 36 100.0 31 .................................... AATTCAATCATATCAACGCTTTAGCTCATCT 8899 35 77.8 0 ..................AA-..C.T.G.A.....T | C [8868] ========== ====== ====== ====== ==================================== =============================== ================== 48 36 99.5 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Left flank : TTTTTGAAATGATTATTGAATACGGT # Right flank : TACAGAACTCATTATTGGGCATTGTTTAATGTAAAAGAAATTTAATGAAATAGTTATCTGAGTAATACATTAGCGAAATTGTAATTTAGGCTGAAATGGTTTATAATGAAAGGTAGCAAGTATATTAGGAGGCCGTCTAATGGAGAGAAAAATTAAAAAATCAGTAGTTGCGACCGGTTTAGCAGCGACCACTATTATTTCGGGTAGTTTATCACATCAAGTAAATGCTGAAGAAGTAAAAACACAATCTACTGAGCCGAAGACATCTGAAAAAACTACCAAACCAGTTACAGAATCAGACGTTCAATCGGCAAAATTAGAAGCAAATGCTGCGAAAGTTCAAACAGATGTTCAGCAGAAAGTTGTAAATCAAGCGAAAGATAACGCTAACGCTTCAAAGGAAGCGGTGGCAGATAGCGAAAAAGCTGTTGCAAATGCTGAGGCAGAAAAGAAAGAAGCAACTCCAGAAATTATTGAAACCGCAAAAGAAGAAGTGGCGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //