Array 1 18333-12544 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTDP01000004.1 Acinetobacter rathckeae strain EC115 flattened_line_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18332 28 100.0 32 ............................ TGCAAACGCCACTCTTTACCGAATTGCTCACG 18272 28 100.0 32 ............................ TTATGTTGAAATGCTCAATGCGCAAGTCAGCG 18212 28 100.0 32 ............................ TGAACCTGGTACGTAAATATTTGCAACAACAC 18152 28 100.0 32 ............................ TTAGATCGTGAAGTGACTGCGATCAATGGAGA 18092 28 100.0 32 ............................ CAATCATTTCATGTATTTATTTACAACATATC 18032 28 100.0 32 ............................ AGAAGAAATCAAAGCAGGGAAGCGATTGCCAT 17972 28 100.0 32 ............................ CACTTTAAACGTACCCGAACTGCATCAATATC 17912 28 100.0 32 ............................ AGTGGTTGGAATGTACGTGTTAGACGAATTAC 17852 28 100.0 33 ............................ CAGCAGGTGTTGATAACCCAAGTGCTGTTTTTT 17791 28 100.0 32 ............................ CGAAAGGTGGTATTGGATTATTGAATACTACT 17731 28 100.0 32 ............................ ACTTGCATCTTGAATAGTGGTGTCATCTAAAT 17671 28 100.0 32 ............................ TCAAGGAGTACAGCTTGACGTACAGTTCGCAG 17611 28 100.0 32 ............................ ATCAATGCAGATTTTCATTGCAGTGTTAATCG 17551 28 100.0 32 ............................ TTGAGGATGGCACCAAAGTAACAGCAGACAAC 17491 28 100.0 32 ............................ TTCACACATGCCGAGCAAATACTTGATATAGC 17431 28 100.0 32 ............................ TTGGACTGTTGATCAGGTCGTGCAGAACATGA 17371 28 100.0 32 ............................ TTATATTTTTCCTTAACTATAAGGGGTATTTA 17311 28 100.0 32 ............................ TGAAATTGGGGTTAATACTGATGTCGTGGCTA 17251 28 100.0 32 ............................ TAACGCTGAATACTTTGCTGTTCATCCAGAAA 17191 28 100.0 32 ............................ TAGTATTGTGGTACTTAAATTAACTTCTTCTA 17131 28 100.0 32 ............................ TAGTATTGTGGTACTTAAATTAACTTCTTCTA 17071 28 100.0 32 ............................ AAAAAACATGCTTTGGTGGGAGCTAGCATGAT 17011 28 100.0 32 ............................ TGAGCAACAAGCCATTACTGATCAATATATCA 16951 28 100.0 32 ............................ TCTACATGTGGTTGTGGGGTATTTGGGTTGGC 16891 28 100.0 32 ............................ TTGAGGATGGCACCAAAGTAACAGCAGACAAC 16831 28 100.0 32 ............................ AATGGCTGGATTTACAAGACAGGTGTAGAGTG 16771 28 100.0 32 ............................ ATGGGTGTTGCCATGATTGGAGCAGGGGCAGG 16711 28 100.0 32 ............................ CAGCTGATAAATGGTCAACTTTATTTATCACC 16651 28 100.0 32 ............................ TGAGTACTCAAATTTGCCCTCGATGACATTGG 16591 28 100.0 32 ............................ AACCATTACTGCCACTTTGGACAGTTTGGTAA 16531 28 100.0 32 ............................ TGAAACAATGGCTGCACAAGATATCTTGGCAC 16471 28 100.0 32 ............................ ATGAGCTTTAACGCAAGCTGTGATTCCTCTGC 16411 28 100.0 32 ............................ TGAAATTGGGGTTAATACTGATGTCGTGGCTA 16351 28 100.0 32 ............................ TAGTGAATACCCCGATGTGGACCCAACCTGAA 16291 28 100.0 32 ............................ ACCCATCAACCATATCAGCCCAATCCTGTCGC 16231 28 100.0 32 ............................ GAACACGCTAGCAAACTCTGACGGCGTACCGA 16171 28 100.0 32 ............................ ACAAAATCAATATGGTTTTTGATCGCAGTAAC 16111 28 100.0 32 ............................ CATTAGTGACGTTAATAATTTGGAAAGATATG 16051 28 100.0 32 ............................ AATTACTCTGAAACCTGTTGTAGATGTAAATA 15991 28 100.0 32 ............................ CAAGTTAGATCGGGTCAATTATTACAAGACAT 15931 28 100.0 32 ............................ ATCACTGATACAACAAGTAACACGCTACATGC 15871 28 100.0 32 ............................ ACTTGCTCTTATTGCAACTTTTTGACCTATTT 15811 28 100.0 32 ............................ AATAAAAAAGCGAGTAATGCAATTAAGCACTC 15751 28 100.0 32 ............................ CTTAAAGAATCGGTTAGATGTCATTAGAGCTA 15691 28 100.0 32 ............................ AGCGAAGCCACCGACTTAGCAAGTTGTGTTTC 15631 28 100.0 32 ............................ ACGATGGTGGCTCAATCGCATCAGGTTTCTCC 15571 28 100.0 32 ............................ CTACAGGTACCAACATGAAGCCCAATTTATGT 15511 28 100.0 32 ............................ GAGTTCAGTTTGGATGTACTTACTCGCCATTT 15451 28 100.0 32 ............................ TACAAATGGAAATACAAAAAGAGCAGTTAGAC 15391 28 100.0 32 ............................ ACAATGGATACATTGTTTTTCTCTGCCGAGTT 15331 28 100.0 32 ............................ TAGCAAATGTGATGATCTTAAATGCGACACAG 15271 28 100.0 32 ............................ ACGAAGCATAAGTTGAAATTGATCTGATAATA 15211 28 100.0 32 ............................ TGTCATTGTTAAAATATCGACTAAACAAGAAG 15151 28 100.0 32 ............................ CCACTGCATTGCCATCGCATCAGCTATGCCCT 15091 28 100.0 32 ............................ AATCATTAACATTTGGCTTTCTTTTTGTTCCA 15031 28 100.0 32 ............................ AATAGCGATATTTTAGATGGTTGGCGTTGGGT 14971 28 100.0 32 ............................ ATTAGATTATTGGGTAGCAATCTGCAATACGG 14911 28 100.0 32 ............................ CACAAGAATACGTTGCCGTGTATTTACAATGT 14851 28 100.0 32 ............................ TGGTAACACGTTGGCCAATCCTTTACACACCA 14791 28 100.0 32 ............................ CTACGCCACGCTACAGATGCAAAAGAGGCGTT 14731 28 100.0 32 ............................ ATTGCAGACATGAAGGATGAACTCTCCAATGC 14671 28 100.0 32 ............................ AACGCATGACTTGAATAGTCGCCGTGAGTATC 14611 28 100.0 32 ............................ CTGATGTGGTAGTGAGAATTATTCATAGTGGT 14551 28 100.0 32 ............................ AAACTAGTAGTATTCAATAATCCAATACCACC 14491 28 100.0 32 ............................ TGCTTGGGCAGGAAAGAATTGGATGGTTGATG 14431 28 100.0 32 ............................ TGCATTAGCTAAAGCCGCAAAAGTCAGTCAGT 14371 28 100.0 32 ............................ GCAACAGGCAAATAGCCCAAAGCTTTACGTGC 14311 28 100.0 32 ............................ TGCAACAACCTAAACATTCTTTTATTAAGCCC 14251 28 100.0 32 ............................ AACTGGCGTATGTGCCATTAGCTTACCGTTAT 14191 28 100.0 32 ............................ ATCTGCGTCAGCTTCGGTACGCACTCGACTCT 14131 28 100.0 32 ............................ CATCTGCGTAAAACATATGGTCATTCGTGATT 14071 28 100.0 32 ............................ AAATGCACGAACTAGCAACACTGCTAGACAAC 14011 28 100.0 32 ............................ AAATTGTAAGTTCTCAACAAACGAACCATTTG 13951 28 100.0 32 ............................ CATGATGTACGCTGTAACAAGTTCGGCAGCAC 13891 28 100.0 32 ............................ CGAATTTTTAGAAGACGGCACATTTTTGGAGC 13831 28 100.0 32 ............................ ATGCAGATTTGGTCAAACTCGCTGTGCGTGAC 13771 28 100.0 32 ............................ ACTCACCCAGTTATGATACCCCCAATCATCTT 13711 28 100.0 32 ............................ TACGCACATAGGTACGCACATATCGCCTACGC 13651 28 100.0 32 ............................ CTTAACGACCAAAGTTCCGTCAAGCCCCTCCC 13591 28 100.0 32 ............................ TCAAAAATCAGACTCAACTTTTCCGCGTGGAT 13531 28 100.0 32 ............................ TTGCGACTTATAGTGTTGACCGCCTACCTGTA 13471 28 100.0 32 ............................ CTGCACAATAACCTGTGACGCCAACAACTGCT 13411 28 100.0 32 ............................ TTAATTGGGGCTTTTTATTGTCTGTGTAATTA 13351 28 100.0 32 ............................ TACAAAGGTAAAGTACACGTAAGCTACACAGT 13291 28 100.0 32 ............................ TACTGGCGTATGTGCCATTAGCTTACCGTTAT 13231 28 100.0 32 ............................ AGTGTGAGTCATTTGAAAGACTTTGTATTCAT 13171 28 100.0 32 ............................ ATGATCTTCCACAACTACCCCTTAAATTTCGT 13111 28 100.0 32 ............................ GTTATGCGTGATTACGTCAGCTTCTTTGTGAA 13051 28 100.0 32 ............................ GCAAAAAGAAAGAAGACGAAGCAGTGTAACGC 12991 28 100.0 32 ............................ TGACACAGCATCGGGCATATTTGCATTGACAG 12931 28 100.0 32 ............................ TGTTGACGCAAGCAACTCAATGAAGCTTACCT 12871 28 100.0 32 ............................ CCTCACGCATCAATTGCATTTTTAAGTCATGT 12811 28 100.0 32 ............................ TGAAAAACCAAGACGCAGAAAATAGGCTCTAC 12751 28 100.0 32 ............................ TGTTGACGCAAGCAACTCAATGAAGCTTACCT 12691 28 100.0 32 ............................ CCTCACGCATCAATTGCATTTTTAAGTCATGT 12631 28 100.0 32 ............................ CTGTGTCTTTTTACTTAATTGATTCGTAGCTG 12571 28 96.4 0 ...........................A | ========== ====== ====== ====== ============================ ================================= ================== 97 28 100.0 32 GTTACCCATCGCATAGATGGTTTAGAAG # Left flank : GGCGTTGGGCAAAAGCACTCTATAAAACTCTTGCGAGAGGTTTTAATTTTGAGTTTAGTCGTGATGAAGGAAAACAGTCGCATGACTCTATACAAGATATTGCCAACAACTACCTCGATCACGGCAACTATATTGCTTATGGTTATGCGGCTGTTACCCTACACGGCATGGGTATTAGCTTTGCACTTCCTATGCTTCATGGTAAAACACGTCGTGGCGGTTTAGTGTTTGATATTGCAGACTTAGTGAAAGATGCTTTAGTGATGCCACAAGCATTTGTCTCTGCACAATTAGGGCAGAATCAAAAAGAATTTCGTATGCAACTGATTGAAACCTGCCAAGATAACGATGTTTTAGACTATATGTTTGGCTTCATTTCAGAGCTATGTAATAAAGTTAAGTAATTTCAACAAGTTACTAGAAAGCACTAAGATTGATGTATTTTTATTCTTTAATAGCTTATATTATTGATTCCTCTGTTTTTTATTTAAAAAAATAGA # Right flank : CTCTCATCTCTCCAACAGCTAAAGATAAAGTACGTAATGATAGGGATTAATAAAAAAAGGCACCCTAAGGTGCCTTTTTTATAACAATGCTATAACTTATAGTTCTTCATTTAGAGCTTGACTAAATGCTTGATCTACTTCGCTAAAGTCATTATGTAACTCAACTTCTGCCGCTTCAGATTCTTGACGACGACGTTCTAAGTGGTACGCAAGACCTGTACCTGCAGGAATCAAACGACCTACAACTACGTTTTCTTTCAGACCACGTAAGTCATCTTCTTTACCAGTTACAGCCGCTTCCGTTAACACACGTGTTGTTTCTTGGAACGATGCTGCAGAGATAAATGAATCTGTTGAAAGTGATGCTTTCGTAATACCCATGAGCTGACGCTCAAACTTCGCAGGGAACTTGTCTTGTGCCAACGCTGCTTGGTTTTCTTGAACCATGCGAATGTAGTCAACTTGTTCACCTTTAATAAAGCTTGTATCACCACCATCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACCCATCGCATAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //