Array 1 130936-133283 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCOL01000001.1 Lactiplantibacillus plantarum strain JSA22 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 130936 36 100.0 30 .................................... AAAATGGATTTCTGAGCATTACTGTCCGAC 131002 36 100.0 30 .................................... GACTATACCAATGAGGTCGAAGCATGGTTA 131068 36 100.0 30 .................................... CACAAGGCCACCGAGGAAGCCGGCGAGCTA 131134 36 100.0 30 .................................... GTTTTTAGCAGATTTAATGAATTCGTCATC 131200 36 100.0 30 .................................... TAGGTTTACTCATGGTAAATCCTCCTATGT 131266 36 100.0 30 .................................... AAAATAAATTTAAGGTTGCGCAACACAATG 131332 36 100.0 30 .................................... AACTCATCATAAATGACGTCTTTTACCGAG 131398 36 100.0 30 .................................... TTAGGTTGAGCTGGATCGGGATCAGGATCG 131464 36 100.0 30 .................................... TCTGTTGTTTAATTTGTTTTAGATTGTTAC 131530 36 100.0 30 .................................... ACTAAAGCCGGGGTATACAGCCCCGAAGAA 131596 36 100.0 30 .................................... AAAATAGTTCGACGAAAAAGCCGAAAGAGA 131662 36 100.0 30 .................................... GCGGCCACGACCGCCATGGGTGTCAGCGCC 131728 36 100.0 30 .................................... TCGGATAACTTAGCGGCGGCGTATCCCTGC 131794 36 100.0 30 .................................... TACCGGGTGTTAAATCTGAATTAGAAGCGC 131860 36 100.0 30 .................................... TCATCAACATTTTCATCAACGCGACTAGTT 131926 36 100.0 30 .................................... ATAGTGACAGCATCTGTTTTCGGACCAATC 131992 36 100.0 30 .................................... GAGGCTTGCACTAGTGAGTTCAATCGTTAT 132058 36 100.0 30 .................................... TGTCCATACGAGCAGCGTTGGCACTTATTC 132124 36 100.0 30 .................................... GTATTATTATCAACGTCCCGCATTGCGTTA 132190 36 100.0 30 .................................... AGGATATATGAAATTAGTACATGTACTAGT 132256 36 100.0 30 .................................... ACGTCTTTCAGCCCAGTAAACTGCTCAAGT 132322 36 100.0 30 .................................... TTGAATACCATTCCTTGTTTATACTCCATC 132388 36 100.0 30 .................................... GGCCGGGTTAATCTTAATGTTTTATGTTCT 132454 36 100.0 30 .................................... CAATCAGAAAGAAGATGACGACTATAATGC 132520 36 100.0 30 .................................... GACTTATACCAGCAGTACCGAAGACGGTTA 132586 36 100.0 30 .................................... AACTGGGAGCGGTCAACACCCCAGGCTGTG 132652 36 97.2 30 .............T...................... ACGCAAAGCCAGCCCTAGTCATGAGGTCAT 132718 36 100.0 30 .................................... GTTGCAACTTTATCCTTGTCACTTTCAACA 132784 36 100.0 30 .................................... CAATACCATAGTAGTCAATTATTACACGTC 132850 36 100.0 30 .................................... GCCAAACAACATTGCAGAGAGCTAGTGCTT 132916 36 100.0 30 .................................... GTGACGTGCTCCCATGTGACCCGAATTGAC 132982 36 100.0 30 .................................... GTGACGTGCTCCCATGTGACCCGAATTGAC 133048 36 100.0 30 .................................... CGACTCTAATGGATATTTTCAATCATAGCA 133114 36 97.2 30 ........................T........... GATGGTGCTGTTGCACGTGATCCCGCGCTT 133180 36 94.4 30 .......................G...........T AGCATAATGTATTATGTAACATATTATGTT 133246 36 75.0 0 ..........ACG.C..C.........T..C.C..T | AA [133267] ========== ====== ====== ====== ==================================== ============================== ================== 36 36 99.0 30 GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Left flank : CAGTCGATTTGAACCGTCTTTTTCTAAAGAAAGTGCAGACCCAAATTATCAAGTTAATGGCTGATGATCGGCAAGTAGCGGTCTTAGATGAAAATCGTAAAGTAGTTTCGCAAGTAATGGAAGCCAGCTTCTTACTAGACTTACCGTTAGATGTTGACGAATCGCCTAGCCTAGAACAAATATTGAAGTTTACCGGTATTCACTTTCCGACGGAGCTTATGAATGACCCAAGGGCAATACTGGAGGCACTCGTTCAGACGCATGTTGAGCTGGGCTTGAAACAAAAACTGGTGTTGACTAATATCAGCCATTACTTAGATCAAAAACAATGGGCGAGCTTTGAGCAATTAGTGCATGATTTGGGCGCAACTGTCATTGTTATCGAATACTCAGAAATAAATCGAATGGAAAAGTTCAAAAATAGTTGTTATTATTATGTTGACGAGGATTTAGTAGACTGGCGTGATATGAATTAATGAGTAAATGATGTTAAAATGCTG # Right flank : TACTAAAAAAGGCTCACCAACTAAAACAGGTTGGTGAGCCTTTTCGATTTATTGACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAAACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAAATGATTCCCAGTTGTAAGAGAATCAGAATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTCCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACATTTGGTAATCCAAGTGCGGTCAAGTAGTTGTAGGCGAAGATCCCCAAGCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAGTAATCTAATTTTGACAACAACCCAGACTTAAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //