Array 1 652384-650021 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGQFO010000003.1 Enterobacter chuandaensis strain 16i NODE_3_length_677847_cov_9.542488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 652383 28 100.0 32 ............................ CATCATGCGCAAAGTGTCTTTCTGGACCATGT 652323 28 100.0 32 ............................ ATGATGCGGACATCTTATTTTTACTTTGTTTT 652263 28 100.0 32 ............................ TGGGTAGCAAACCCTGTTGCGCCATCTGCTGA 652203 28 100.0 32 ............................ TTCTGCACTGGCGACAGACCTCGGAACTGGTG 652143 28 100.0 32 ............................ GGTAGTATTGCCACCGCCAAACGCAATCAGAT 652083 28 100.0 32 ............................ ACCGCGCGGGCGCAATAACCGCGACTTTCATG 652023 28 100.0 32 ............................ TGTGTATCGCCTATGAATGAGTAGTAAACAAA 651963 28 100.0 32 ............................ GTTACCGGCTTTAAAAGAGGCGACATCGTTAT 651903 28 100.0 32 ............................ TTGAGAACATCCGAGGAATGCCCTGCTGGTAA 651843 28 100.0 32 ............................ GAAGGCGGTACGCTTGTTCGTAAGCATCTCAC 651783 28 100.0 32 ............................ AGAACGCTACGTCGAGTTCATGTCCAACCCAG 651723 28 100.0 33 ............................ CAGATGTCTAACGACTGTGGATCTGTAGAGCGC 651662 28 100.0 32 ............................ ACACGAACCTCCATATTTATGCAATTCCCCCT 651602 28 100.0 32 ............................ CATGTGTATTAGTATCGCCACCGATAGAATAC 651542 28 100.0 32 ............................ AGTTTTTTCTCCCTGCTCTATACTTTCAGTCT 651482 28 96.4 32 ..................T......... GCCAGAAACGCCAGAAAATTGATGATAACCGA 651422 28 100.0 32 ............................ GCATACTTTGCACTTACGGCGTGATGGTTTAC 651362 28 100.0 32 ............................ TGCCGTCGAAACTGCGCAAAGAGTTTGATAAC 651302 28 100.0 32 ............................ GACGGGCGTGCCCGTGGCCGGGTCGTTGTGCT 651242 28 100.0 32 ............................ AAAGGTGCCGCTCGTCAGCAAACCCATCTCCT 651182 28 100.0 32 ............................ TGTCAGCAGCCCAGTCCGTTTCGTTCCATTGT 651122 28 100.0 33 ............................ CTGACGCTATCTATGTGGATCCGCGCAAGAAGA 651061 28 100.0 32 ............................ TGTACGAGAAGAATGGCTGTCGCTTCTTCGAA 651001 28 100.0 32 ............................ GTGGCGATGGCTGGCAGTTGCGCCGCCAGTGG 650941 28 100.0 32 ............................ ACGAGGCTCAACTGCATTTGAGAAGGCGTTAT 650881 28 100.0 32 ............................ TGCAGGAGCAACAAAAGCTCGCAACAGTAGCC 650821 28 100.0 33 ............................ GCCGGGAAGACTTCATCCGTATCCGCGATGAAT 650760 28 100.0 32 ............................ TTCGTAGGTATCAGCGCTGTACGTGAATGATT 650700 28 100.0 32 ............................ AGTTCAGGCGGGCTATGATCCGGCGTTTATTC 650640 28 100.0 32 ............................ TAAATGTTTATGGCAAAACGAAACTGGCCGGT 650580 28 96.4 33 ........C................... TCTCCGGTTGCGACCTCGAATTACTGGAACGCA 650519 28 92.9 32 ...T....C................... AGGATACATCAGCCTTCATAGTGATACTCCCA 650459 28 96.4 32 ........C................... AGGGTAAAAGCTGGATGTTAACAATAAAAGAG 650399 28 96.4 32 ........C................... TGACGCACCTCGTCGGCACCGGCGACAACCGG 650339 28 96.4 32 ........C................... GTCTGGCTGGAGATGTATTTATCCCCCTGCCC 650279 28 96.4 32 ........C................... GCGAGCTTATCCAAAAAAAGAAACGGGCTGGA 650219 28 96.4 32 ........C................... TCGCAGAACTGGTCCGCCTTTGCGGTGCGGTT 650159 28 96.4 32 ........C................... GTAAATGCCTGGTCAGGAATCATCGTGGGGTC 650099 28 82.1 22 ........C.TC...C......C..... ATAGAAAATAAGGCCTCACTCC C [650074] Deletion [650050] 650048 28 67.9 0 C..G.......A...AA....C.C..TG | ========== ====== ====== ====== ============================ ================================= ================== 40 28 97.9 32 GTGCACTGTCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTACGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATTCCTGTGACGCGCAAAATGTCCGCTTTCGACATTGCGGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAATCCCTGGTTGAGATACTCAATCAGACGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTGCGCGGGGATCCAGGTTCTCATACTACCTCCGGATTAATGTCATTTGTCATGGGTAAGTATAGTCATTTGTCAGGTAGAGTGGAATGAGTGTTTTTTATGCAGGATAGTTTTTGGAAAGAAGAGCGTTTAACCCTAATTTTTAGCGTGATTGTAATGGATTGATTTTAAATAAATATTTTTGGCGGGTAAAAAAGAGGGTAAGAGAAGAGTTTTTAGCTTTTTTGTATGAAAATCATTATGGTATGAAGATATTATTCCA # Right flank : CTCAAACGAACCGCCAAATAATTGTTCAAATAATCAACTACACCATCAAAAAATAAGGCCGGGGAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGTCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 666729-661827 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGQFO010000003.1 Enterobacter chuandaensis strain 16i NODE_3_length_677847_cov_9.542488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 666728 28 100.0 32 ............................ AGCACCGGTGCGCCAGCTGCTTCGGTCAGTAT 666668 28 100.0 32 ............................ GAATCTGTGGTGAATGGGCAGATATGCGAGGC 666608 28 100.0 32 ............................ TTAAAGCAGCGAAAGAATCAATTCTTCATATC 666548 28 100.0 32 ............................ ATTGCGAGCAGTAAGTGCGGCGGGGTATGGAA 666488 28 100.0 32 ............................ ACAAACATTGGGCTATTCTCTTGCAAGCCGGT 666428 28 100.0 32 ............................ GGTATGGGTGGTGATGACCGCCGTGTTCGTTC 666368 28 100.0 32 ............................ AGAACGGCGGCACTTAGTTTCGCCCGGCTATT 666308 28 100.0 32 ............................ ATAATATGGGTAGTTATCGACCACGATAGTTG 666248 28 100.0 33 ............................ AGTGTCATCCCCAATCGTCCATTTTTCCTTGTT 666187 28 100.0 33 ............................ TCAATGACGCGCACTGATGCAGCCAACTCTGAC 666126 28 100.0 32 ............................ AGCTTGAACCACGGACGGGCCGGGCTGGTGAT 666066 28 100.0 32 ............................ TCACACACGATTAAATTATTACCAATTTAACC 666006 28 100.0 32 ............................ AGGTGATTCCAGCGTGACAGCGCCACCAGTTA 665946 28 100.0 32 ............................ GGGTGGAATGAATGCCTTGAATCTGTGCAAGT 665886 28 100.0 32 ............................ TGTACCAGGCCACTTCACCGGCATGCTTACGC 665826 28 100.0 32 ............................ CTCTCCCGCTGTCAGTTCTGGCAGTCATCCCT 665766 28 100.0 32 ............................ GGCATGCTTACGCAACTCCAGATGCTGGCAGT 665706 28 100.0 32 ............................ ATACAGGTTGGCATCACGCAGGTCGGCACCAC 665646 28 100.0 32 ............................ CATTGTACCGACATCTGGACGTATTTGACGCG 665586 28 100.0 32 ............................ GGAACGGAGTCAGGTTGTGAATTGAGGCACCC 665526 28 100.0 32 ............................ AGACGGATATGTCTACTGGCGTCACTACGCCT 665466 28 100.0 32 ............................ ATTTAGCAAAGTCGACCAGAACGTCGCGTAAC 665406 28 100.0 32 ............................ GTACCGATTTGACTTTACGTACTGAGATATCA 665346 28 100.0 32 ............................ AGAACATCCGTGACCCGCAGCACATGTCTAAC 665286 28 100.0 32 ............................ GATCCGGCGCAGGTATTCATTGACGGTAATTT 665226 28 100.0 32 ............................ GGTTAGCGGAAAACATTTTGCGAGCTACCAGA 665166 28 100.0 32 ............................ TGGGTAGCAAACCCTGTTGCGCCATCTGCTGA 665106 28 100.0 32 ............................ AGTCAGTCTCAAAAGGTGCGTACCATCACCGA 665046 28 100.0 32 ............................ GCAGCATACTGCCACATCGGCAATGGATCAGT 664986 28 100.0 32 ............................ TGGGTATAGATTGCGGTAACTATGTTTCCCAA 664926 28 100.0 32 ............................ AGTGTTTCATGACTTCCATCATGTCCGGCTCT 664866 28 100.0 32 ............................ ATTATTCAATCCTTACCTGACAACCACTGAGC 664806 28 100.0 32 ............................ AGAAAATGCTTGGCGGAGCAGCATCGGGCGCA 664746 28 100.0 33 ............................ AGTACGCCGGAGTGAAGAACAGCATAGCGGCAG 664685 28 100.0 32 ............................ TGGAAGAAATGCGACTCCAGGTTAAGCGGGAG 664625 28 100.0 32 ............................ ATTAAAGGATTACCGGAATCATCCATTGCTAC 664565 28 100.0 32 ............................ TTGATGCTGAGTTCTGCTTCCAACTTGATGCC 664505 28 100.0 32 ............................ GCTATTGGCATGGCTTTTATCGTGGTTTCCTG 664445 28 100.0 33 ............................ TACCCCGGAAGCGCTGGTCTTAAATTTTACGAC 664384 28 100.0 32 ............................ ACCCCGCCACGCCATTAACCCTCTTAATATCA 664324 28 100.0 32 ............................ AGCCTGCGCCAGCCAGGGCATCGATATTTGTC 664264 28 100.0 33 ............................ CACTTTGTAAGATACCGATACGTTTTCACTGCC 664203 28 100.0 32 ............................ TGTTATGGGCTCCGTTTCGTGGAGCTGCCGGG 664143 28 100.0 32 ............................ CGATCTCCCTCGGCGGCATTTATGATGCGCAT 664083 28 100.0 32 ............................ ATAACTTTAATCAACCTCTTCAGGCATGTTGC 664023 28 100.0 34 ............................ CCGGCGCTTTGCCCCGCTCATGTTGAGTATCACT 663961 28 100.0 32 ............................ TACACGTCAGTATGATGAAGGTAACTCCAGAA 663901 28 100.0 33 ............................ CTGCCTTTATCTCACCGTGTGGAACCATAACCC 663840 28 100.0 32 ............................ GCGTGGCAGAGCTGCGCGATTGTCGCAACGTC 663780 28 100.0 32 ............................ TGTAGTGTTAAAGAGCGGTACTGCTAATACTT 663720 28 100.0 32 ............................ ACGAAAGGTAGAGGGCATCTGATGTGTTCTGG 663660 28 100.0 32 ............................ TTCGACCCGAATATGTTCGTGGAAACTCGGGA 663600 28 100.0 32 ............................ GCTTTGTATCTTTGTCCATTTCAAAGTAAAAG 663540 28 100.0 33 ............................ CACCAGCTCTGCGTAAATCTCCCGCTTAATCTG 663479 28 100.0 32 ............................ AGCCTGAGCCGTTCACTATTGACATTCCGCCC 663419 28 100.0 32 ............................ TTTCAGCACTAAAGAAATTCATCGCGGTAAAC 663359 28 100.0 32 ............................ TGATTAAAGTAACTACTTCTGGCCGCCAGTCG 663299 28 100.0 33 ............................ AGCAGCAGTTACAAAACCTTTTGCCGCCCGGTC 663238 28 100.0 32 ............................ AAGCTGATGCAGGCGCTGGACTATGACGCGAA 663178 28 100.0 32 ............................ GACGAATACCGCGCTATTCCGCTGGATATGGC 663118 28 100.0 32 ............................ ACGCTGTGAGCGCTGAGCACCTTAATCACCGC 663058 28 100.0 33 ............................ AAAATGTCAATCGTTTCTGACTTGAATGAGGAT 662997 28 100.0 32 ............................ ATTCTTCCCCACTTCCATCAGCCAGCCATCAA 662937 28 100.0 32 ............................ AGGAAAAGAACGCATATAACCGTTAGAGTTGA 662877 28 100.0 32 ............................ TGTATGCCGCTCCTGTTGCTGCAGTCCATCCT 662817 28 100.0 32 ............................ AAGGACCTGGTGTCGCCTTCTCCGCGACTTCC 662757 28 100.0 32 ............................ TGTTCGTTCTGCGCCGCTGAGCTGCCAGATAC 662697 28 100.0 32 ............................ GAAAAGCTCCGATTGCTGACCCGCTGGAGTAT 662637 28 100.0 32 ............................ GCAACTGAGCGCGCTGCGTTCTACCACTACGC 662577 28 100.0 32 ............................ AATGCGCGCCAGCACCAGCGTCGAGAGGTTGG 662517 28 100.0 32 ............................ AGGAGGGACAAGCATGAAATTTGGATATGCCC 662457 28 100.0 32 ............................ AGCAATCCGCAGAGCGAAGTAACGGAGCGCCC 662397 28 100.0 33 ............................ TGAACGAAGATATGCCGGATGAGGTGCGCTCAA 662336 28 100.0 32 ............................ CCGTGGTGCCGGCGAGTCTGCCAGCGGAAAAC 662276 28 100.0 32 ............................ TGAGCAAAATCAGCCGCGGACGTGGAGGCCTG 662216 28 100.0 34 ............................ CATCCTGCAAAGCCGGGTTTTAACGAGCTTTCAG 662154 28 100.0 32 ............................ ATGAAACGCACGCCATTTTACCGCAGGCCCGG 662094 28 100.0 32 ............................ TTCATAGCTGTTTCCGTTTTTTATGTACTCTT 662034 28 100.0 32 ............................ GCTTAACGGGCAGCGCGGCGCGGTCCTGGTGT 661974 28 100.0 32 ............................ GCGCCAATCCCTGCTCTCAAAGCCGCCTGAGC 661914 28 100.0 32 ............................ TGCGCACGCACTTCAGCTAGGAAAGCGTCGGT 661854 28 75.0 0 ...........C.........ACGACT. | ========== ====== ====== ====== ============================ ================================== ================== 82 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCTTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGGTAGTGGAATTTGAGGATGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGAGCGTTAAACCATGTACTGCTGGTGTCGCATTTTGACCGCGATATGTTGCCGCACCTGTCGGGGCTGCTGCATGACATTGCGCATTCAATGGCCGCGGATGTCGTTGCACCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGCAATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATGGTGTGGATTTGCGTCCCAGAAAAAAGGGTTTTATGCGTATAAGTTGATTATTTTATTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : AAACCCACACTCTCTATTTTTCACAATAAATAAAAAATCTATTCACGTACGAATTATATTTCAATTAATATATTATTTGTAAAAATAATGAATTAAATGAAAAAGTAATTTTTCGCTTTATCATCACGGCAATTACTCTTCATTTGATACCCGTCACATTTTTTTTCATCTTATCTCCGATAACATATCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCCTCAGACTTGAAAACCATTCTGCATTCAAAACGCGCCAACATTTATTACCTGGAAAAATGCCGCATCCAGGTAAATGGTGGGCGCGTTGAATATGTCACCCAGGAAGGGAAAGAGTCATTTTACTGGAATATTCCCATCGCCAATACGACAGCGGTGATGCTGGGGATGGGAACATCCGTTACGCAAATGGCAATGCGGGAATTTGCACGAGCAGGCGTGATGGTCGGTTTTTGCGGAACGGACGGCACGCCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //