Array 1 65515-65284 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYZZ01000043.1 Peribacillus cavernae strain L5 18849_L5_1__paired__trimmed__paired__contig_43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 65514 31 96.9 33 ...............-................ AAAAGGGTTAAGAGACTTTGTTACTATTAATAG 65450 32 100.0 35 ................................ AAAGGACGTTTTAAACGATTATTTTTAGTGTTCGT 65383 32 100.0 36 ................................ TATCCGGTTGTGAATCTCACAAACTGCCGCACCGTA 65315 32 93.8 0 ............T......G............ | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 97.7 35 GTCGCATCCTACATGGATGCGTGGATTGAAAT # Left flank : TAAATGTTATCATTTAAATAGAGATAGTGTAAAGAATATTCAGATTGGTTTATAAAATCACTTTGTGTACCGGTAAAATACGAACGAATCTCCTTTTTTAATAATCTAATTAAATATGTATCTGATAATGAGAGGTAATTACATGGCCACTAACGCTAAACAAATAACACACGATAAATTATTAAATAAGGCTCTTCGCCACTAACAATGATTTTACAGAAAAAAAGTAAAATCTGGTTTTCTTATAGACTTAAAACCGGACAAGGGAATGAGTTCAATTACTCGCTTCGTATTCACCCTCTGTTACACGCATAGAACCCTTCGATCATGGCTAAACGGATAGATGGACAAGGGAATGGGTTCAGTTGCGAGCGAAGTATGGCTCCGAACTGTTACTCATTCTTTTTATTTGAGCGCAAAATCCAGTTTCCCGGCAAGAAAATAAATCACGGCCACCATGTTTTTCTCTGAGCGATATCCGCGAGCCTTTTCCTAATGAC # Right flank : TTGTAGAGGAAGTAGTAGAAATAGCGTTAACGTATAAAGAACCTGACTAAATATATTTTAATATGTACCATTATGATAAGAATACACCAATCTATCCTTTATGAACCAGCTACCCAATACAAAGAAATTATTCTGCTTATTTGAAATTTTTAAATTTCCCCTTGACTTCGTATACTATCAGCGATAGAGTTATAAAAAAGTGAATATAATTCTTATCGAGAGAGGTGGAGGGACTGGCCCTTTGATACCTCAGCAGCAGACTTATAGTACTGTGCTAATTCCAGAAGCTAAGAGCTTGAAGATAAGAAGAGATATGGACCAAGGCGCCAAAAACCTCTTCTGCTTCAAGAAGAGGTTTTTATTTTTCCCCCTTACATTTTAGAAATAACAAAAAAGAAAGAAGGTATTATTTATGTCGATTACTTTGACAAAGGCACCATTCAGGGCAGATCATGTAGGAAGTTTATTGAGGCCCAAGCACTTGCTAGAAGCGAAAGCCA # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACATGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.60,-3.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //