Array 1 30301-27649 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMYC01000003.1 Bifidobacterium anseris strain Goo31D Contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 30300 29 100.0 32 ............................. TGGGCGCGGGGTCTTGGTGGCCGGCGGCCGTT 30239 29 100.0 32 ............................. GCGCCGCTGCACGACCTGCTCGAACGCACCGA 30178 29 100.0 32 ............................. GTGATCGTCTTGGGCCTGATGCGCGTGTCGAT 30117 29 100.0 32 ............................. TCGACGAAACGACGGGCAGCTTCCGATACGAC 30056 29 100.0 32 ............................. GACTTGTCGTTGGCGATGCCGATATGTCCGCG 29995 29 100.0 32 ............................. ATCACGTATTCGCGATTGAATGGCACGGCCAC 29934 29 100.0 32 ............................. CAGTTCACGCCCAGCTGTTGCAGTCGTGCGTA 29873 29 100.0 32 ............................. TCGACCGGTTCGCCCGCCTGCTCAGCCTTGAC 29812 29 100.0 32 ............................. TCAGTCAGCGCAATAGTAGTCAGCGAACGGCC 29751 29 100.0 32 ............................. TGGCCGTCATGCTCGACACGTTCGGCATCGAA 29690 29 96.6 32 ............................T ATCGAGCAAGACGTTCCGTTGGAAACGGTTAG 29629 29 100.0 32 ............................. GTTTCAAACGACCCGTAGAGCGGCGAACAGGC 29568 29 100.0 32 ............................. CGAACATCGAGGGGGCGGCCATGGCATGGAAC 29507 29 100.0 32 ............................. GCGGCCTGCGCATGCTCCGCGGCGAACGAGCG 29446 29 100.0 32 ............................. AAACAAGGACCTTGTCGGAGCAGTTGGGTGTG 29385 29 100.0 32 ............................. TCTGCATGAGCGGGTAGCCGGCGAGCGGCGTG 29324 29 100.0 32 ............................. AACGCCGGATGCGGACGCGGATGCGGCATGCG 29263 29 100.0 32 ............................. TGGTTCAGTGGCGTGCCCGACCGCATCGCCGG 29202 29 100.0 32 ............................. GTGGCCCACTGTTCGCGGCCGGTCTCGGTCTG 29141 29 100.0 32 ............................. CGGTGACAGCCAGATAGTGCGTGACCTGAGCC 29080 29 100.0 32 ............................. CAATTCATTCACACACAGGAGGCATCATGACC 29019 29 100.0 32 ............................. GTCTCCCACGCGCCACGGAAACAATAGTTGAA 28958 29 100.0 32 ............................. GAGGCCGCTGAAGAAGCCGCCGATTCTGCCGA 28897 29 100.0 32 ............................. GTGCACGGCGAACGCACCCGCAAGGCCGAATG 28836 29 100.0 32 ............................. GGCAATGTCAACGGCTTTGCGGCGCTTCAAAA 28775 29 100.0 32 ............................. AACGACCTCAACGCAATCAAACACGCCGTATG 28714 29 100.0 32 ............................. GACGATACGGCGACGTGGACGTCGTCCGCCGT 28653 29 100.0 32 ............................. GCCCTCGCGAACTGCGGGGGCGTTTGTGTCTG 28592 29 100.0 32 ............................. ACGGCCGTGTTCCTCGACCCGAGCGCCATGAC 28531 29 100.0 32 ............................. TCTTCGAGGTCAGCGTGACGGGAATTCCGGCC 28470 29 100.0 32 ............................. ATTGGACGCGAGCCACACGTACCACAGTTTCG 28409 29 100.0 32 ............................. TGGCATGGGTGCATGACCGAACGTCGCGTCGT 28348 29 100.0 32 ............................. TTGGCGCCGCGCGGCACATCAACCGTGACCGT 28287 29 100.0 32 ............................. ATGCGCCCCCCACGCTTGCCCACATAGGACGC 28226 29 100.0 32 ............................. GACTGCCATGCCTGCCGGCCGGTCTCGGTCTG 28165 29 100.0 32 ............................. AGTTGGTTCGCGCGGTCGATAACGCGCTGGAA 28104 29 100.0 32 ............................. GCGCCATTCGCGACGGCGGCCGTGGTGTTCGG 28043 29 100.0 32 ............................. GTACGGCCCACGCCGGCGCCGTCGCCCACGCC 27982 29 100.0 32 ............................. AGGTAATCCACGCTCACGTCGAAGATGTCGGC 27921 29 100.0 32 ............................. GCAGGCTCCAATCATCGACCTGCGTCTCCCAC 27860 29 100.0 32 ............................. TTTCCCACTGTGACAAGGTGGCCATCCTTGCC 27799 29 100.0 32 ............................. CGCCACGCACGACCGGCAGGCACCGCGACGGC 27738 29 100.0 32 ............................. CACCCGAGCCAGTTGGCGAGATTGGCGTGCTT 27677 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.9 32 GTGCTCCCCGCAAGCGCGGGGATGATCCC # Left flank : GATGAGTGGGGAGGGTCGCAATGGTAGTTATCGTGTTGACCGCTTGCCCGACCGGCTTACGCGGCGATGTGAGCAGATGGCTGTTGGAAATCGCACCGGGCGTGTTCGTGGGACATGTCACTGCTCGTGTTCGTGATCGGTTATGGGAACGCATAGTGGATACACTGAAGGATGGGCGAGCCATCATGGTCTTCTCTGCGCGCAACGAACAGCATATGGATTTTCGCGTGTTCAGATCGGATTGGCAGCCGGTCGACTGTGACGGTCTGCAGCTGATCAAGCATCCTAATGAGTCTGATGAGCAGGAGTCCCTCGAGACATTTGCCGGCAAACCGCGACGCGGCTGGAGCAATGCTGCGAAATACCGACGTGCGCGACGATATGGGAAGAGACCGGGAGAATGATACAGCGGAGGAGGAGATGCGAAGTGCGCCGTGAAAAGTGAATGAAAATGCTTCTCGCTGATCAATGATATGTTGGAAACACAGGGATTTCTTAGT # Right flank : GTGGTGGATGCAGGATTCGCACCTGCGCGGCTCAATGGCGGCCGATTTACAGTCGGCTCCGGTCGGCTACTGGGGCAATCCACCGGGTGTTGTATACTCTGAAGTAAAGGGAGTCCCCGTGCTGGCTTGGAATAACAGTTGGAAAGCGCGGGATTGGCTCCCTTCTCTCATTCCAGTGTCATCTCCCACAGTCCTTCGGATGAATCATCCATGATGAAAAGGTGCCGGATTGGCGCTCCCCGCAAGCGCGGGGATGATCCCGGTCGAGATTATGTTTGTATTTTGTCAAATCGGCATCACCTCAAAACCTCAATCCCCAATTGAACACAAACAGTCGTGGCCGCGGCGGTCGGCAATCGCACGTTTGCCCCGCACGCGCGGGGATGATCCGAACAGACGCCGCTTGTTTGAGTTAGCCACGTCGTTTGCCCCCGCAATCGCGGGGGTGATCCCCTGAGCGGGTTCATGAAGGCGTTCACCGATTTGTGCTCCTCGCAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCAAGCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAAGCGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //