Array 1 23753-24571 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVZL01000020.1 Acidithiobacillus ferrivorans strain PQ33 Aferri_contig000020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 23753 37 100.0 34 ..................................... GCGCCCGTATCCGCACGAGGCTGAAACTTTGTAC 23824 37 100.0 34 ..................................... CCGTTCCCATCCCGCATCCCGGAGATTCACAACC 23895 37 100.0 34 ..................................... AATGATGTGATTATGTCAGGGACACCCTCGCGCC 23966 37 100.0 35 ..................................... CCCACAGTTCAGGGGTAGAAGATGGCCCGAGTAAC 24038 37 100.0 34 ..................................... TATATCCTCATCCACAAGCGCTCGGACGATTCCG 24109 37 100.0 34 ..................................... GTCAAAGCGACAGCGACGATCAATAACGCCGGTG 24180 37 100.0 35 ..................................... GGGGGAGGGTTGAACGCGTTGCTAATCGGCACAAA 24252 37 100.0 34 ..................................... AATTTAACACCCCGCTTGGCGGCCTGGACGCATT 24323 37 100.0 34 ..................................... TGAACCTCCGCACAGGTGGCACTTTGGGGCAGAG 24394 37 100.0 34 ..................................... GATCAACACCGTATGGCTCGGGTATGCTTGCTCC 24465 37 100.0 33 ..................................... ATATGTAACCCACGCTACATATAGTCTCTTGCC 24535 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 12 37 100.0 34 GTATCGCCCGGCTTATAAACCGGGCGTGGATTGAAAC # Left flank : GCCATACCTGAGCCGTTGAGGAGGCGTAATCATGCTCATCATCGTCACTTACGATGTCTCTACCGAAACAGCGGCGGGGCGCAAGCGTCTGCGCCGCGTGGCCAAAGCCTGCGAACGGGTGGGCCAGCGCGTGCAGAAATCTGTTTTTGAATGTCAGGTCAATCAAATGCAATACGAGGCTTTTGAGCGCACGCTGCTGGCGGAAATAGACGAAGAAGAGGATAATCTACGCTTCTATCGTCTCACAGAACCCACCGAACTGCGTATCAAGCAATATGGAACCTTCCGATCTATCGACTTTAATGGTCCCCTCATGGTTTGATGCGCGAACCCGGATCAGCGTTTCAAAGCCCATCCTTTCGCGCGCCTCGTATCTTCCTGTTCTATCATCGTTTTTATTAGAAATCCTTGGGGTCCGTATAGGTTTTCTGGTAGCCCTGTCTGGCATTCGCGGCATACGCAAAGAAAACTGTTCATTAACAATGTGTTGCAACAATGCA # Right flank : CATGGAGAACGTCGCAGCCATCCTTGCTAACGAACGTATCGCCCGGCTTATTAGATTACGAACAGCAAGTCCAAAAAAATGCAATCATGGTACACCGTTCCTCCTAAAGCTGATGACGATAAGTTTCCCAAACATTTATTTAGTCGAGGTAGACATCGACATTGTGCTCGCGGCGGTCATCCATGAGCGGAATCCTGTCTTGCGGCAATTCAGTGTCATCCAGGGTAATGCGCACTACCCGCGCTGATGCGGTGCTATCAGCATGGACGGTGATATGATACAGCGTGTCGCGGTAGCGGTAGTGGACCTTGTAGAATTTCCAGTCCGCCGGGACGCAGGGCGTGATGCGCAGGTGATCAACTTCAAGCGACAGGCCCAGCAAGGTTTCGATCGTTAATCGATACATCCAGCCCGCTGCGCCGGTGTACCAAGTCCAGCCACCACGACCAACGTGCGGTGCGGTGCCATAAATGTCGGCGCAGATAACGTAGGGTTCCACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCGCCCGGCTTATAAACCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.70,-14.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //