Array 1 113010-118124 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKYZ010000005.1 Diaphorobacter sp. NR2-3-3-1 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 113010 36 100.0 30 .................................... TCGGAGCGGTCGGGTCTGCGCCGCCTGGTT 113076 36 100.0 30 .................................... TCCGCACGGCAATCGCTGCTGTATGGCGGC 113142 36 100.0 30 .................................... TTGCCCGCGAGTCTCACGCTCGCACTGCTG 113208 36 100.0 30 .................................... TACACCTACCCAGTCAAATTCATCCACAAC 113274 36 100.0 30 .................................... ACGATGAACGCGATCGCATGCACTCCGAAA 113340 36 100.0 29 .................................... GCGCGCCCACCGGGGTCTACGCAACGCGC 113405 36 100.0 30 .................................... GGATGGCTGACAAGTGACATCGTGTTCGGC 113471 36 100.0 30 .................................... ACAGGGTAGGCTACCCCCACAGGGCATCAG 113537 36 100.0 30 .................................... GTAGGACATTTTCGTAGTTGGTGATGGTGC 113603 36 100.0 30 .................................... AGAACGATGGAGGAAATCTGGGCGATGGCA 113669 36 100.0 30 .................................... CTGATCGACAAAGACACCTATCAGCCCTGC 113735 36 100.0 30 .................................... CCGCCTGTACACCGAGATCATCGATGACGA 113801 36 100.0 30 .................................... ACTCCTCACGGACTCGCAAGCCAACGCCTC 113867 36 100.0 30 .................................... CATGGTCTACAGAGCTTCAAGGTGCGTTAG 113933 36 100.0 30 .................................... TGCCCCCTCGTAGTCCCGCGCCTTGTACGC 113999 36 100.0 31 .................................... ACCACAAGGACACATACGCAGAACGCTTTCA 114066 36 100.0 30 .................................... ATGAATACCAGGGATGAACTCTTGGTCGAT 114132 36 100.0 30 .................................... ACGACGAAAAACATCTTCGCGTCCGCCGTG 114198 36 100.0 30 .................................... AGTTTGTGAATTGACATCAAGCATCAACAT 114264 36 100.0 30 .................................... TATGAGTAACCATGGAAGAAAAGAACCATT 114330 36 100.0 30 .................................... GCAATGGATGCTTGACCGCTGGCGTGCTGG 114396 36 100.0 30 .................................... TAAGGCGGGGCGGTTTCGTACGGCCACGGT 114462 36 100.0 30 .................................... CGAGTACGGCTACCCCGAAAGCGTGACGTC 114528 36 100.0 30 .................................... ATCACTGGCCGAATGTACTCGGCGGACAAG 114594 36 100.0 30 .................................... TGTATGCGGTATCAACTGCAGGGGGCGCAG 114660 36 100.0 30 .................................... ACACCACGCGTGTCTACGCGTCGCTGGCAG 114726 36 100.0 30 .................................... TTGGGTGACCGCTGGGCATCGCTGCGCGTG 114792 36 100.0 30 .................................... ACGCAAATACGAAGTGACAGCAGTCACAGG 114858 36 100.0 30 .................................... TGGAAGTGGCGAGACCTGATCGATGCAGGC 114924 36 100.0 30 .................................... CTCCAGCGGGTGCAGGTGCTCGCAGTCCGG 114990 36 100.0 30 .................................... CCAATTCATGCAAAAGGAAAAGATCTTCGA 115056 36 100.0 30 .................................... ACCATCACCATCCACATCATCGACGAGCCC 115122 36 100.0 29 .................................... TCATGCCCCTGGGCGGCGAAGGCATCGCG 115187 36 100.0 30 .................................... GCTGAGTGGGTGCTGGCAGAGAAGTACCAG 115253 36 100.0 30 .................................... CCAACTACCCCGCCAGCGCAAACCAACCCA 115319 36 100.0 30 .................................... ATGACAAACGCATGGTGAAAAATCCCTGGT 115385 36 100.0 30 .................................... AAGACCAGCAAGCAATTCCTCGCCGACTTG 115451 36 100.0 30 .................................... GCGCAGCGGCAAGATCTACAGCCGCTGGAA 115517 36 100.0 29 .................................... GAGAAGTTGTTGATCGAGCCCATCTCAGC 115582 36 100.0 30 .................................... TTGAGGTTCGCGTTGTCACAGCGGCAACGA 115648 36 100.0 30 .................................... TCATAGATGCGCGTGAAATCGCCGTCTACG 115714 36 100.0 30 .................................... TGCTGGTGGGCCGCCCAGAAGGCTTGCGCC 115780 36 100.0 30 .................................... CGCAACGTCTTACCTGCGATTGCTGACGGC 115846 36 100.0 30 .................................... ACACCATGGGCGGCAAACAGTACCAGGTGA 115912 36 100.0 30 .................................... GCGCATCGAACTGGATGCATGGCTGATGAG 115978 36 100.0 30 .................................... TCATGCTGCAAGTCGGCGTGATGCGTGTTC 116044 36 100.0 30 .................................... TACATCACCTCAGGCGACCAGCGCTTCGTC 116110 36 97.2 30 ..................................G. GACATCGGCGCGGTCGGCGCGAAGGCCGAG 116176 36 100.0 30 .................................... GCGACCCCGTTGTAGGTCTTGCCGTCTGGG 116242 36 100.0 30 .................................... CCATCGTCTGGCCTTGGCATGTAGCGTACG 116308 36 100.0 30 .................................... TCAAACATCACGCAGGTGTGGTGCCGCCCG 116374 36 100.0 30 .................................... GGTCCTGCCTTCCGTAGTCCTTGACCATCA 116440 36 100.0 30 .................................... GCCACGGCGCGCACCTGCTTGGCGGCATGC 116506 36 100.0 30 .................................... AAAGAATCAGTAATGGAACGCCTCAAAAAG 116572 36 100.0 30 .................................... AGGATGCGCCGTGGTACTGGGGCGGCAGCG 116638 36 100.0 30 .................................... AGGATGCGCCGTGGTACTGGGGCGGCAGCG 116704 36 100.0 30 .................................... CCACTCGGGCACCCCACGGTGAACGGTAAG 116770 36 100.0 30 .................................... GCAGACGCTGCAAACGTTCCCGGCGATGGC 116836 36 100.0 30 .................................... GACGAAGAGGTGGACAACGAGGACGAGAGC 116902 36 100.0 30 .................................... GTATCTCCGGGGTTCAGTGTTTGTGAGCCT 116968 36 100.0 30 .................................... TTGCGGAGCTTCATCGCCTTGACCTCACTC 117034 36 100.0 30 .................................... CGGTCATACCCGTGGCCCTCAGCCCACGCG 117100 36 100.0 30 .................................... CCGCTCACATAATCGAAGCCCTTTGGGGGA 117166 36 100.0 30 .................................... TCACGACTGCATCGAAGATCAGGGCGTCAC 117232 36 100.0 30 .................................... GGGGGTTACTGGCCCGTGGCACGCAGAGCG 117298 36 100.0 30 .................................... TGCACCTTCGGGTGGAAGCGCAAGAGCGAC 117364 36 100.0 30 .................................... TCCGGGCCTTTTTTGAAGCCAGTTTTGCAC 117430 36 100.0 30 .................................... TGTGTTTGCGCCCCTGTCGAAACCCCCAAG 117496 36 100.0 30 .................................... TGCAGACCAGATCGCGGTGGGCTTCGAGCA 117562 36 100.0 30 .................................... TCGTGGACCGATCAGGAACCAGTCAGGGTG 117628 36 100.0 30 .................................... TTCATCGAGAACCTGATGCTCAATCCGTCG 117694 36 100.0 30 .................................... TATCAAGTCCTTTCTGTGCGGATACACACA 117760 36 100.0 29 .................................... AGCAGCCCTCAATCACAAAGCCACTGATG 117825 36 100.0 30 .................................... AAGACCTATCACCGTAACAAGCCTGCCGAC 117891 36 100.0 30 .................................... GCGTGAAGCGCTTGGCGTAGTCCTTCACAT 117957 36 100.0 30 .................................... GCGTGAAGCGCTTGGCGTAGTCCTTCACAT 118023 36 100.0 30 .................................... ATAAGCAAACATCACATCAGCGAGGCGCTT 118089 36 86.1 0 .................A........C.C..A...A | ========== ====== ====== ====== ==================================== =============================== ================== 78 36 99.8 30 AGTTTAGTTCACTGGGATATGTGCACTGGTCGGAAC # Left flank : TTTGCCGCTTTCCCTTGCTGGGAGTCTGGACGCAGATTGATTCATTGAGTCGTGGCTAGTTCACGCGATTGAAAAGCAAACCAGGAGGAAAGGTGAACTCAACATGCTTTCTGGATACAGGCTTATGTGGATGCTGGTGATGTTCGACCTACCAGTGGTCACCAAGCCAGAACGAAAAGCCGCGACGGGCTTTCGCAACGCCCTGCTGGACATCGGATTCGAGATGAGTCAGTTCAGCGTATATCTGCGTTTTTGCACCAGTCAGACGCAGGTGGACACGCTGTGCAAGGCCGTTGAGCGGGTCTTGCCAAGCGGTGGCAAAGTTCATATTCTTCAGTTCACCGACAAACAGTACGGACGCACGATCACCTTCCACGGACGGAGCGCCCAAAGGCCGAAAAAAGCGCCTGATCAGTTTGATCTTTTTTGAGGTGAATCGTGAATTATTGGGCTGAAAAAACGAAAAACCCCTTGAGAAATCAAGGGGTTATCGTCGGCGC # Right flank : ATCTCCGTTCGCTCACGCCATCTCCACCACCGGATAGCAGGTCTCGCCCCATTCCGTTTCCGTGCTGCCGAGCATGATGGCGATGATCACGGGGACGAGTTTTCCCATGATGTTGCAGCAGTCCTGCAGTTGTTGGCGGTTGACGGAGCCGTTCCATGTCGCGCCGCCGTGCATGAGTTGGTTGCGCACCGTGTAGATGCGCTGCAGCACCAGTGTGAGCAGGTCGGGGGTGTTGCCGTTGGACAGGAGCTTGTTGGCGCGTTGCTTGCCGTTTTCGAAGCGCTCCTTCCAGGAGTCCTCGGTGATGTGGCCGCGGTGATAGGCCCAGAAGGACTCGAAGACGTAGGGGTTGCCGAGCAGCACGCGGATGGGGCCGCTGAACTCCTTCCAGACCAGCCAGTCCAGATGCTTCTCGGCATCCTGCCGGTGCAGGCGGTTCAGAAAATCGGTGAAGGTCAGCTGGGTGCTCAGTCGCTGTTCGCGCGGCAGCTCCTGCGCGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGTTCACTGGGATATGTGCACTGGTCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //