Array 1 445253-446402 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016280.1 Clostridium tyrobutyricum strain W428 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 445253 30 100.0 36 .............................. AACCTCATATATCCTGGACAAAAGTTGGTGATACCA 445319 30 100.0 36 .............................. TCATCATTACTTGTAATATGACCACAATTTGATATA 445385 30 100.0 36 .............................. ATTGGAGTATCAAGACAATCAGTATCTTTGTATGAA 445451 30 100.0 34 .............................. TTACATCTGCTATATGGAATACTGCACAGAGACT 445515 30 100.0 37 .............................. GCTAATGATATAGATAGTAAAGAAGCAGAGGAACTTA 445582 30 100.0 36 .............................. TTAAATAAAAATAAATAGCAAAAATCCGTTAAACAG 445648 30 100.0 36 .............................. CTGCTCATACATTGTCAAAATAGACATCATGGTATC 445714 30 100.0 38 .............................. GGAAGATTTTTAGAATTACAGAAGAAAGCTGATGAACT 445782 30 100.0 36 .............................. GCTCTTCTTCAAGTGCTCTGCATTCATTAGGAGTTT 445848 30 100.0 34 .............................. AAAATACTATATCGCCTTTCGTCGCGTTTCCTTT 445912 30 100.0 36 .............................. TTATTGTATTTGCCGTCACAAACATCAATAGCAAAT 445978 30 100.0 37 .............................. TTTTATTAAATTCTTCTTTTAAATCGTCGTTTAAATA 446045 30 100.0 36 .............................. AGGTATGTTTGCAGTATCACTATTAAGTTTTAAATC 446111 30 100.0 36 .............................. TCCTCAGACTGGTTCCTTGATAAAACAGAAAAATGC 446177 30 100.0 35 .............................. GATTAGGTCTCAATTTAAGCAATGGATATAAATAA 446242 30 100.0 36 .............................. ATTTCTTGGGTATAACTAGTATACAACTGAAGTCCA 446308 30 100.0 35 .............................. CCAAAGAGGATATAGTTATACAATAAATCATAATG 446373 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 18 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAT # Left flank : TAAATTTTGATAGTATATTATTCCACATTAAAGATTATTGTAGAGGGGATTGAGTTGATATTTATATAATAGATGAAAATAGCTATGAAGAACTTGTAAAATATAAATTTTTTCTTTATTCCTCATGGAGAGTTGGAGAAGCCAAAAGCTTTTATAGCATAATGGATTTGAGGTAGAAATACTCAAATTTTACTATCTTTTTCAATACTCGATTAAAAGTTTCAATTATTTCCCGAAAAGTAGATTTCTTGTACTTTTAATATAAAAAAATATATATAAAGACTACGAAAAATAATTGATGATCATGAACTTCAATCTATAGGATATATAAAGGTATCAGGTGGAATGTGTTTTGAAATGAAAAGATATCTGAAATACTTTACTTCGTACAAATATAAATTTTATGTAAACAATTCAAAAAAATATACGACTATATTTATTCAATTGATTTTTGTCTAGTTTCAATGCCAATAGCAATGCACGGAGTGCATTACAGAGTT # Right flank : TCACAGTAAAAGAGTCATTCTCTAAATTCATTATAACTCCCAAACCATTGAAAATAAAGCCATCTAATAAAATTTTTCCAACCATTTTGTATTATCTCACTTTAGAATTAAGAAAGATTACAAATATACTTATATCAATGTCTTATAGCATATTTAAAAGTAATTGAGGTTGGAAAAATTATTTATCTATATTATTAAAATTCAACTATATCTATTTCTGTGAAATATGCAATGGTATTAAAGGATGGCCTAAGGCCTTTTCTATTTCAAAAACAATAATAAAAGTAATAACACTTACAACTGATCCCACAATAACAGCCATAATTCCAAAAGGTTCATTGAGATATTGCCACCAGAATCCAGCAATACTTCCAAGAATTATAGACAGTATACCAGCATGCTTTGTAACATTTTTCCATGTCAAACCAAAGATGAATGCTGCAAAAGGACCAGCTGACCTCATGGTGAAGGCAAATACAAGCATAGGTATAATCTGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 2402120-2402747 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016280.1 Clostridium tyrobutyricum strain W428 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2402120 30 80.0 35 ....T....TT..AA..T............ AGGTGATATATGGGCAAGTATAGAGCTTCTATGGG T,AA [2402129,2402134] 2402188 30 100.0 37 .............................. ATAAAAAATGCCATCAATATTCGTTCCAACCCACCAT 2402255 30 100.0 35 .............................. ACAAATGAAGAGTATGTAAATGCTATGTCTGCTTT 2402320 30 100.0 36 .............................. TACTGCCGGACAACTCAGTGTGGATTTTTTTAGATT 2402386 30 100.0 34 .............................. ATGTTGAAAGAAAGGGTAGAGATCCGTTTGACTT 2402450 30 100.0 37 .............................. CATTTGTAGATGCGAAAGTATCAAGTGTCATTCCCGC 2402517 30 100.0 36 .............................. TAATTATGAAGTTCAAGCAATGTCAAGAGTAGAATA 2402583 30 100.0 37 .............................. CTGCCAATGAAATAGCATCAAATACCATAACGTCTGC 2402650 30 100.0 38 .............................. GGGGAGTACTAGGGAGTTACAGTTGCAAGTCTGAATGC 2402718 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 98.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAC # Left flank : ATCCTTACTCTGGTGGCAAGGGAAATTCTATAAGATATCTTTCTGTAGCCCCTGTTTCTAATGATCTACATGTACGAGGAGTAGATAACCTATTCTGTGGTGGAGAAAAAAGCGGTTTATTCGTAGGTCATACAGAAGCCATATGTACAGGTTCTCTTGCAGGGCATAATGCAGTAAGATATGCTCTCGGCAGACCTGAGCTGGTACTTCCAACTGAAACTGCCATTGGAGATATAATAAGCTATGCCAATTACAAAATTAAAACTGCAGAGGGTAGAAAAAACAGATACACTTTTGCAGGTGCAGAGTATTTTAACAGAATGAAAGAAAAGGGACTATATACTACAGATAAAAATGAGATAAAAAAGAGAATAGAAAAATTGGGTTTAACAGATATTTTAACAAAGGCTTGATATCAAATTAAAAATTGGTATAGATTTATTCAATATAATTCTATACCAATTTATTTATAATAATTGTCTCTTTAATTAAAATGTTTG # Right flank : CCTGTGTAAAATAGCCATTCTTTAATTTCATTATAAGCTTTGAAAGCATATAAATAAAGGTTTTCGCTGAATTTTTTCCAACCAATTTTTATTATGCATATATTTTATAAGAAATAACGTAACCCATTGATTCTAAATAAATTGAAGTGATTCTAAATAGCAAACAGGTTGGAAAATTCAAAGTATCAAGTTTTCAGTATTTTTATCATTTATACCTAAAGTTTCCTCCTCAAAGCAACTATCATTTATAAGTTTTATGATTGTGACAAAATCCTTATCTGCTACGATCTTATTTAATTCACTTTTTAATTTTATTAATTTAGATGGAGTTATAGATCCTCTAAAAACAGAATTTTGATGATGGTGGAAATACTTTTTACATATTTTAAATATCTTATTTACTCTTTTTTCATTTACATCATAAAATACAAAAGCATAATTAAAATTAAAATTTTTTCCCATTAAAATCCTCCATACTATATCATATTTTTCAAACTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //