Array 1 74910-73800 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJON010000028.1 Microcoleus sp. FACHB-831 contig28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================================================================================================================== ================== 74909 37 100.0 34 ..................................... TTGCCAATTCAATTGGCGTGATTGGTATCAAATT 74838 37 100.0 36 ..................................... CTGGACTTTTATGCCGCAGCTTATCGCACGCTAAAA 74765 37 100.0 34 ..................................... TCAGCAGCTTTAGAGGCTTCATTCAAGAAAGAAT 74694 37 100.0 33 ..................................... TCTAAGGCTCCTTGTATTGGCTCGTCATTGGTT 74624 37 100.0 35 ..................................... TCTATTGAGCTATTCAAAGGCAATCTGCGCCTGCG 74552 37 100.0 35 ..................................... AGATTCTGGCTTTTATCAGGCTGCCGCCCTAGTGA 74480 37 100.0 34 ..................................... CAGGACTTCTTCAATCTCAGCCAGGAATTGCCTA 74409 37 100.0 40 ..................................... GCTACCACCATGAAGAAAGCATTACGCATGGGGCCGAATC 74332 37 100.0 34 ..................................... AAAAGTAATTGTTACTTAATGGGGTATGTATGGC 74261 37 100.0 36 ..................................... AGAGAAGTATCAGGAAACAGAACATGACAAGTTGTG 74188 37 100.0 33 ..................................... GATTCAGAAGTTGGTAAAAGTCTTGTTTGGCGA 74118 37 100.0 38 ..................................... ATTTCTACCCAACTGCGCGAGTCAGCAAATCCAGACAA 74043 37 97.3 170 ............................A........ TTACAATTAACCAAAATTCCTATAGCAATCCTATGCAGAATTGTGAGATGTCAGAGGTTCAGATCCGCGACTTCTTAAAGAAGTCGGAGAGCTTGCAGGGCGAATCATTTACGACTGCTCTATCAGGGATTGAAACTTCTTTAACCTCGGTTTTGATGCTGGCATCACGC 73836 37 97.3 0 ...................T................. | ========== ====== ====== ====== ===================================== ========================================================================================================================================================================== ================== 14 37 99.6 46 CTTACAATTACCCAAAATCCCTATCAGGGATTGAAAC # Left flank : ATTTTTTATTAAATTTGCGTTTAGGCTGGATAGATACTTTGGTAGGCATTTTTTTAGCGCTTTATTTTCTATTTTGCGCTGAAATATAGGCTGACGCCAATTAAGGAAGGTGTTAAGATTTAAGACGCGATCGCCCCTCTCCCTTGGTTACTCAACTATTGCGCGATCGCCTGCTTTTTTGATAAGCATAAAGACTGGCGATCGCACGAGTGTAAAATAGGATTTCGCCCATCGGGTTTTATGGCTGTCTGGCGCGGATGGGTAGCTGTTTTTTTAGGGGATAAGAAGTTAGCGGCTGGATTGTTTAATTTACGGGTGTTTGAGGCGATCGCGCCCCAAACCGGACTCGCGCAATTTCTTCAACCTTTGTTAACGCTGGCTTTGGGGCAAAAATTCCGAATGGGTACTTTACAAGTTAGCGTCGGCAATGGTATTTTGTTCAGTGTTACGCGCAACCGCACCTCGAAAACCAAATATACGCTGGTTTCTAGACGGCTGGT # Right flank : TTAGAATTAAGCAAAATTCTTATAGCAATAATATTTGAATTGTGAGATGTCAGAGTTTCAGATACCCGACTTCTCTAAGAAGTCGGGTATCTCGCAGGGCGAACCACCGCTCATTTTTCTTCCTTCGTAGACTCTAAGGGTGGGACGGGATCGTAACCGCCGGGATGCAAAGGATGACACCGCAAAATGCGCTTTATCGCCATCCACCCACCGCGCCAAGCACCAAATCGGTCTACCGCTTCCATTGCGTATTGCGAACAAGTCGGATGAAATCGACACACTGGGGGAAACAAAGGAGAAATCAGCACCCGATAACCGCGAATTAACCAAATCAATACAATTTTCATCGTGTCGCCGATATCTAATAAAGTGGAAAAGAGAGTATTTGCACTTTTATTAAGTCCTTGTTAAAAACTTTGCCTTGGTTAGAATCAATCCCGGCTGTATGGTTCCAAATTGCTCTTGTTGGAGTATGTTTGGGCGTAATTGTACTTTTAGCA # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:-1.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTACAATTACCCAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 16004-20568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJON010000042.1 Microcoleus sp. FACHB-831 contig42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 16004 37 100.0 33 ..................................... TGAATTTCTTCTACTGGATAGCCAATCTTAATA 16074 37 100.0 35 ..................................... CACCAACTCAGCAAGCGGCAACAGCGATCGCGTCC 16146 37 100.0 33 ..................................... GCATTACTGCTTGGTCGATACGTTGCACCACTT 16216 37 100.0 34 ..................................... ACAGCTTCAGGCTTAGCAATTCCCATCCACGATT 16287 37 100.0 34 ..................................... TATTTGTGAGTAAACCCCCGAAGGGGCGGGAATA 16358 37 100.0 34 ..................................... CTGAAGAGAACTCGGTTACTCCAATCAAAGAACA 16429 37 100.0 34 ..................................... AACTGCTGCCTCGATCCAGTCTGACACCTCTAGC 16500 37 100.0 35 ..................................... GAATGCTGCCACGAAAGGTTACGGTGTGGAATTCT 16572 37 100.0 34 ..................................... GTTTAGCTGTAACGGGCGCGGCGCGGGAAAACAG 16643 37 100.0 38 ..................................... TACACGCTGAAAGTTGCCGCCCTTGCTGGCATTGATGA 16718 37 100.0 39 ..................................... GAGGTAATTTAGCTTCCAACTTGGGTAGACAAAAGGCCA 16794 37 100.0 36 ..................................... CAGTGAAAGAGCAATTATAAGCAGCCATCATTCCAT 16867 37 100.0 41 ..................................... AGTTCCATCTCGCGGATCGCAAATTGCTACCCATGCTACAG 16945 37 100.0 34 ..................................... AATTAGAGCTATTTGAATCTGAAGCTCAACACCT 17016 37 100.0 38 ..................................... CTAGCCATAAATTACTAGGATCAATAGTAATAGAAGCT 17091 37 100.0 34 ..................................... TTGTAGTTTCATGGCTCTAGGTAGTAACTATGTA 17162 37 100.0 36 ..................................... CAGAGGCATATCGTAGCCATGATGTTGATTTAGCCC 17235 37 100.0 36 ..................................... AGGCGTAAAAGCTTTAATGCTTTCAAATAATTCCGT 17308 37 100.0 34 ..................................... ATCAGTTACAACGCCTATCCGCAAGGCGTTGTGA 17379 37 100.0 34 ..................................... TGCTTCAAAGCTTGCTTGCCTTGTTGCCCACCTA 17450 37 100.0 35 ..................................... TAAATGCTGATGATGCTATAGAAACCTTTTTTCTA 17522 37 100.0 34 ..................................... TTAGGAGGAAAGCAGGGCAGGGAAGCATTAAAGA 17593 37 100.0 34 ..................................... TAAATCTGTAGCGGCTTCCGGGAGGAAGATTATT 17664 37 100.0 34 ..................................... AGCGAGGCAATAGGGAAGCAAGTATAGGAAATGC 17735 37 100.0 34 ..................................... TAATCACCCCAAAGGATACCATTACATCTGTATC 17806 37 100.0 35 ..................................... TTATACAGAGTTAGACAGGGGATATCAATTTCAGG 17878 37 100.0 35 ..................................... GGCAGATTAGTCGCGATCGCAGGCATCGCTTTAAC 17950 37 100.0 37 ..................................... GCCATCAGTTGCAGCGTTGCTTTTAGCTCTGCCTCAA 18024 37 100.0 35 ..................................... GGATTAATCTCCCTCCTCTCTCTAGTGGATTGCTC 18096 37 100.0 34 ..................................... CTTTACCTACGACGCCAGGAGCGTCTATGTTTCC 18167 37 100.0 37 ..................................... GGTGCAGGGCAAGCCAGTTGATGGTGTATCACCAGAC 18241 37 100.0 34 ..................................... CAATCGCGGGAGCCGGAAACAGACTCAGACTCAC 18312 37 100.0 36 ..................................... CTTGGCGGGATCTCTGCTGGGTAATATCTCTGAATC 18385 37 100.0 35 ..................................... CTTGGCGGGATCTCGCTGCCAAATATCGTGATAAA 18457 37 100.0 36 ..................................... GGGTTCAGAAGTTGTCGTAGGCCGCAGACTCGTTAT 18530 37 97.3 34 ...G................................. TCATCCATGATTCTTACTAAATAAACAACATCAA 18601 37 100.0 35 ..................................... TATTACTTTTCACGGCATAGGCTAAAAAGTATGTT 18673 37 100.0 35 ..................................... GTCGCCATTGATGGCGAGGGTGTGAGTTTCTAGGA 18745 37 100.0 37 ..................................... ATTAGATTTAGAATCAAAAGCGCGAAAAAACACATCC 18819 37 100.0 35 ..................................... TAGATCTACAAATCTGGGTTAAGACTTCCACCATT 18891 37 100.0 35 ..................................... GCTAAGGCTATTGCTGGATGCCAGAATGATTTACC 18963 37 100.0 34 ..................................... AAAACGAATCACAAGTTGATGTCTTTATTAGGAA 19034 37 100.0 34 ..................................... TGCCTTAAACGCCCTCCTTGCAACTTGAGGAGTA 19105 37 100.0 35 ..................................... CAATCTGCCGTGAAAGTACATAAAATTGCTCTCTG 19177 37 100.0 34 ..................................... CAAAGTTGATGAAGAAAAGATCGTCAACAGATCT 19248 37 100.0 35 ..................................... GCGCTGTAGCAGGTCTAAGCGCGAGCTATGCTTCC 19320 37 100.0 34 ..................................... GGCGCCCTAGCCTCTGAGACTGGCATAAGCTCGC 19391 37 100.0 36 ..................................... TTTTTTCGGTAAAGCTCAACTAAATCATCAACTTCC 19464 37 100.0 33 ..................................... TTTTATCTAAGTAATAAGCAATGATCTTGCCTT 19534 37 100.0 34 ..................................... GCAGAGCAAACGAATCAGGGGCGAAGTGCAGCAA 19605 37 100.0 34 ..................................... TCGCCCATCTGGAAGGATTGCTCGTCGAGCGGAA 19676 37 100.0 34 ..................................... GAGATTGTTTCTCTATCTGGGCTGTGTAGTTAGC 19747 37 100.0 34 ..................................... TTCCAGATTCCCAGTTACTAATCGTTGGTACCGT 19818 37 100.0 34 ..................................... CGGGAATTGATTACTGAAGCACTCCACGTACTAA 19889 37 100.0 35 ..................................... AAGATATTGACCTGCTTTCGCATCAAAAGGCAGAA 19961 37 100.0 34 ..................................... CTCATACTCGGCCTCGGACTGGATGCTGTCTCCA 20032 37 100.0 34 ..................................... GCACTCGCTGCCGCTGCCGCTAAACCCAACGCGA 20103 37 100.0 35 ..................................... AAAGCTATAGATGGCACTAGAGTGATGGTGCGATC 20175 37 100.0 35 ..................................... TTGGAAGATTTCGCTAATCTCCTCTGCACTAAAGC 20247 37 100.0 35 ..................................... ATTAAGTCGGTGAGCTTCCCTTGCTTATGTAGTTC 20319 37 100.0 34 ..................................... AAACAGGGCTAGTTGGTTGGGCGAGGGTTGGTTG 20390 37 100.0 34 ..................................... ATCGACAACTCGATCGCCAGCGCTGAATTTACAA 20461 37 100.0 34 ..................................... TTTTCTGTCCGCTCTGGGGCCGTCGTTTCGTAGC 20532 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 64 37 100.0 35 GTGCTAATTCATCAAAATCCCTATCAGGGATTGAAAC # Left flank : CAGAGGATAAGCGTCGTACTAAGATTCATTCGATACTCAAGTCTTATGGAGAGTGGGTGCAGTTGAGCGTATTTGAGTGTCGGGAATTGACGGAGACTCAGTATGCCAAGTTGCGATCGCGTTTAGCTAAACTAATTAAATCTGACACTGATAGCGTTCGCTTTTACTTTCTTTGTGGCTGTTGTCAGGGTAAGGTGGAACGCATCGGCGGCGAACAACTACGCGATGACACGATGTTTTTATGTTGAAGTGCGCGGGTGGGTAGGTGTTGAGGAGAAGGGTTTCTAGAAATGCGAGCGAATTAATTGCCTGCTAAGGGTTTCGTGTTATAGACGCCCTAAGAAGATCCGCGCAACGACTGTAATGCTTGATAATCTGAGGTTTACCGGAAAAATTCTCAAGGGTGCTATTAGGAGCTGTAGTCTCTGTGTTATGATCGCTCTTGATTCGCGCAATCGTACCTTGAAAACTAAATATAACTGGCTTTTCAGTTTCGCGCG # Right flank : CTAATAACCGATAACTGATAACTTAATTTTTAACTTTAATTTGACGCTCAATTGCAAAACTTATCGCAATGAATAAAACAGTTAACCCCTGGATGGCGTAAACGACAGTAACAGGAACATTGGCGCTGCGCTGCATGACATTGGCGCCGCTGCGGAGGACGCCGAAGAATAGAGAAGTAAGCAGGATACCAGCTAAATTACCACGACTGAGAAGCGCGATCGCGATCGCGTCAAATCCATATCCAGGTGAAAAGCGATCGAATAATCGATATTTCAAACCCATCACTTCACCCGCACCAGCTAACCCCGCTAAACCTCCAGCTAGCGCCATCACAATTATAATCGTGCGTTCAACCGACATCCCCGCGTAACGCGCCGCAGTTGGATTTAAACCTACCGCTTCGATTTGGTATCCTAGAGGCGATCGCGCTAATATCCACAGCAATCCCGCAGCAATTAACCCGATAAAAATACCCGCATGCGCTTGAGTTTGGGGCATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTAATTCATCAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA //