Array 1 4706-3898 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHGG01000037.1 Acinetobacter baumannii strain OCU_Ac10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4705 28 100.0 32 ............................ AACCATGAATAAGCCCATCGAAATATAAACAC 4645 28 100.0 32 ............................ ATTCACCCTGCCAGTAATAAATAACCTTGTCG 4585 28 100.0 32 ............................ AAGATTGCCAAAGAATTAGGAGAAGATTATGA 4525 28 100.0 32 ............................ ACTAATAGGGCATTTGTAGCGGTTAATGATTA 4465 28 100.0 32 ............................ AACAACTCAGCAAGTTGATGCCGAATTTATTG 4405 28 100.0 32 ............................ TTCTTACGAGGCTGTGCCGACGAGCAACACGT 4345 28 100.0 32 ............................ TTTAACTTCGCCCCCCTCGCGTGTCATCTCTT 4285 28 100.0 32 ............................ AAGTAGGCAATGCTAGAGGTATCCTCAAAGGT 4225 28 100.0 32 ............................ TTGTACAAGCGTATTGAATGTGCCCTCATCAA 4165 28 100.0 32 ............................ ATCATTGTTTTAAGTGATTCCCAGTGCTGACC 4105 28 100.0 32 ............................ CTGTGGGTTGATGGTCAAAATATGGACGTTGG 4045 28 100.0 32 ............................ TTAAGTGGTGTTATCAAAATGAGCAATGATTC 3985 28 100.0 32 ............................ AATTAAGCACTATCGACACGTTACAAACTAAG 3925 28 92.9 0 .........A.................G | ========== ====== ====== ====== ============================ ================================ ================== 14 28 99.5 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : ACTTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATCCCGCCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACAGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTGTTATCTAGCCAATTTTTAACATATTATTTGAAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGTTTCTTCCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGACATTCAAACTTTAACAATAAATTATGCATGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACAAGAGCAATTTTGGATAGCTATGCTATTCGTACAGGATATTCGTCTTGGCAAGCACCAATGACAATGGAAGGCTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACTCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGAAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTACTCATGCTTGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCAGGGGACATGCATGATATTGGTAAGGCCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 9795-16921 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHGG01000037.1 Acinetobacter baumannii strain OCU_Ac10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 9795 29 96.6 31 ............................T TTGACTCCAGAATTGCTCGGGGCTGCAATGA 9855 29 100.0 31 ............................. GCAGACACAGGCACGAATGCCTGTGTTTCGC 9915 29 100.0 31 ............................. TTAGCCCACGCAAGCTTTGCCTCAGCACCGC 9975 29 100.0 31 ............................. AAATAAGCTTGAAGGGAAAGTGGCGAAAGTT 10035 29 100.0 31 ............................. TCCTTGTAGCAGTACAGTTGACCTTTACTAT 10095 29 96.6 31 ............................T AACAAGATCAATAATATAGACACCACCATCA 10155 29 100.0 31 ............................. AGCAATGAATCCAAGTTGTGCAATCCAGTAT 10215 29 100.0 31 ............................. AGGAAAAATTAAAGATAGTTATGAAGCAGAA 10275 29 96.6 31 ............................T GAAATAACAACGGGCTTATTCTGATCACCTG 10335 29 96.6 31 ............................C TGAGCAAAACAATAACATTTAGACGTTTTCT 10395 29 96.6 31 ............................T ATCACCATCCTCAATCAATCTCCTACAGTCA 10455 29 100.0 31 ............................. GTTAAAAGAATTTGGATTGCATATTCTTTTT 10515 29 100.0 31 ............................. AAGTAGCGGAGTACTACGACATGTTAAAAGC 10575 29 100.0 31 ............................. GCAACACGGCAATATGTTGGGATGTGGGACG 10635 29 100.0 31 ............................. TGTAATGCGAGATATTAAGAAAATCATTAAG 10695 29 100.0 31 ............................. GCCCCCATTACACGCGGGACGATATGAATAG 10755 29 96.6 31 ............................T TGTTCATGTCGCACATAACGATAAATCTTTC 10815 29 100.0 31 ............................. TCATCGTAAGCATTGAATCGCGTGCCTTCAA 10875 29 96.6 31 ............................T TTAAAGCCCCTTTTTAGGGGCTTTTTTATGC 10935 29 96.6 31 ............................T TTATTTGGCTTTGCATTTAAATCCTTTTCTC 10995 29 100.0 31 ............................. TTCTGCCCGCTTCCGAGACCATAATCATGAC 11055 29 100.0 31 ............................. TCCAGTCATATCAACATTCGGATTGACTGTA 11115 29 100.0 31 ............................. TCATATAACGCGCTTCAACTTGAGCCTTTGC 11175 29 100.0 31 ............................. ATCCCGAAGATGGCGAAATTAAGGTAGTCAA 11235 29 96.6 31 ............................T GTAGATGGACTTTGGTGTGACTTAAATATTC 11295 29 96.6 31 ............................T TTTCGGGCATTAAAAAGCCCTCGAATTGAGG 11355 29 100.0 31 ............................. ATCAAGGCAACCCCTAGTCCAGTAGATAAGC 11415 29 96.6 31 ............................T TTACTGGAATTGAGCAAAATCGTATTCAATA 11475 29 96.6 31 ............................T TAACCACTACCGCATTTGCTGCTGCAAGTTC 11535 29 96.6 31 ............................T TGCGTTCCACTGTTTTATTGATTTTTATGTC 11595 29 100.0 31 ............................. GCTTGTAGATGATGGCAAAGGTGGTCAAGAG 11655 29 100.0 31 ............................. AAAAAAGAAACAATTGAAGTTTCAGAAGTTG 11715 29 100.0 31 ............................. TTTTCATGACGACAAGCCCATTGGGACCAAT 11775 29 100.0 31 ............................. GAAAGCGCTTGGATTGGATATTGCGGTTATC 11835 29 96.6 31 ............................T TCGGCTAATTCAAATTTAACTCGATTTTCAA 11895 29 96.6 31 ............................T ATCGACTTACCTGTTCTACTGATCACATCCA 11955 29 96.6 31 ............................T TCAGAAATAGATTTAATGCTAAAGGCTTTAG 12015 29 96.6 31 ............................T AGCAAACTCAGAGGAAGCTTGGAATTTAGTT 12075 29 100.0 31 ............................. GCAAAGTCCGCAGAGGGAGCGTTTGTTAATG 12135 29 96.6 31 ............................T CTGGAATGCCTGCCTCAAGCAAGCCATCTAA 12195 29 96.6 31 ............................T TTCTTATGCTGCTGATAACTTTGAGCTGGAC 12255 29 96.6 31 ............................T CTTTGAAAGTACCGTCCCACATCCCAACATA 12315 29 100.0 31 ............................. AACCGACAAAACAAGGTGAATAATCTAGTCC 12375 29 100.0 31 ............................. ATACTGCAAACATTTTTCTAGATGGTGAATA 12435 29 100.0 31 ............................. ACATTCTCCGCCCAGCAAATAATTGCTTTGA 12495 29 96.6 31 ............................G TAATCGAATTAGTTGCTCATAATGTCGAAAG 12555 29 96.6 31 ............................T TCTGGGTTCGGCTCTAATTCCGAAAGCTCTA 12615 29 96.6 31 ............................G ATTGTTCTGCCTTGCCGGGAAGCTTCATTAA 12675 29 96.6 31 ............................C AATTTTCTTGCGCAGCTTCTTCTGCATTAGC 12735 29 96.6 31 ............................T CTAAGGTGCTGCTTGAAGTGCTGAATAGGTT 12795 29 100.0 31 ............................. ATTAAGCAAGATATTCAAAATACGAAAGATC 12855 29 100.0 31 ............................. CTAGATCCAGTGTTAATCTGCCAAGTGAAGT 12915 29 100.0 31 ............................. GAGTCTGCCCCGATCAATCCTTCAGATCCGA 12975 29 96.6 31 ............................G AAAGAGCGATTTCTTGTGTGGGCATCAATTC 13035 29 96.6 31 ............................T AACCCTATATGCTTATGAGCCACCGATTTAA 13095 29 100.0 31 ............................. CAAGAAATAGCAGCAGGCCACCGCATTGATA 13155 29 96.6 31 ............................T TCTGCGGCTGCTTTGGAGTGGTTATTGTTCA 13215 29 100.0 31 ............................. AACATTTTACACAGATCAAGCAGCGGGATTT 13275 29 96.6 31 ............................T ACGACAAAAAGGCTAAAAGATACGTTATTAA 13335 29 100.0 31 ............................. GTAGTTAGCAACTCATGGAAGGTTTCCATAC 13395 29 100.0 31 ............................. AACTCAATAGCAGTGGCGTAAGGCGCATTCG 13455 29 96.6 31 ............................T TGTTGTGTTGAAGCGTAATGATGTGAAGGAT 13515 29 96.6 31 ............................T TTATGGTCATCAAAGAATGCTTTGATTTGCA 13575 29 96.6 31 ............................C CGAAAAGCACGCTTTTCATGTTCAGTGTGCC 13635 29 96.6 31 ............................T TCATCCAAACTTTAAGCGGCGTATGAGTAGA 13695 29 96.6 30 ............................T GTCCTTAGCGGCAGGTTTTTTATGCCTGAA 13754 29 100.0 31 ............................. ATGGAGCACGATAACCACAAGGTTCATAAAC 13814 29 96.6 31 ............................T GAATGTAGAGACGCAAGGAGGGAAGTTAAGG 13874 29 96.6 31 ............................T CAACATTGTAGGCGCGACTATTGGCTTCTTT 13934 29 100.0 31 ............................. TCATCACTTGATTTCTTGACCGTTTCTACAA 13994 29 100.0 31 ............................. AGCACCCCCGTTTGGACAATGAACAGCAAAG 14054 29 96.6 31 ............................C ACAGGTGTGCCAAATTGAATTGCATCATAAT 14114 29 96.6 31 ............................G ATAGCGGTGCGTAACGTTCCCGCCACTGCAC 14174 29 96.6 31 ............................T ACCGGAAGCGCTACCGTTCATTGATGACGAA 14234 29 96.6 31 ............................G ATAGCGGTGCGTAACGTTCCCGCCACTGCAC 14294 29 96.6 31 ............................T AATAGCACACGTGTTGAAGCTGGAGATATAT 14354 29 96.6 31 ............................G TGTCGTCACGCTCAACAGAAACGTAGTCAGC 14414 29 96.6 31 ............................T GCCTCCTCTTTTGCGATTAACTCTTGAATTT 14474 29 100.0 31 ............................. TTAGTGTGCTTGGTGTTACAACATCATTTTC 14534 29 96.6 31 ............................T TTCTCATATAACAGGGTAGATGCGGTTGCAC 14594 29 100.0 31 ............................. ATAAAACGCCTATTTAGATTGGCTGCGGCCT 14654 29 96.6 31 ............................T TCAATCATTGCTGACTGAACAGACCATGTAC 14714 29 96.6 31 ............................T ATAGCTAAACAATTGTGATGTTTAGATATAA 14774 29 100.0 31 ............................. TCAAATTGCCAGCAGCAGTTCCAACATATCG 14834 29 100.0 31 ............................. AATCACAATTGAAACGAATGGTAGAGCACTT 14894 29 96.6 31 ............................G TAATGATCATATCTAGCGTATAGGCCATTTC 14954 29 96.6 31 ............................T TCTTCATCAACCACATTGATTGGCTCTAAAC 15014 29 100.0 31 ............................. GTTACTTGCTTGATAATGTAATGGCACAACG 15074 29 96.6 31 ............................T CACTTCAAAATAGCGTCTCCTCAATTAACGA 15134 29 100.0 31 ............................. AAAGCGCATACGGCAAGTACAACGGTTTCGA 15194 29 96.6 31 ............................T TTGACTTACTTCAGTTCTCTGTTGAAGATGT 15254 29 100.0 31 ............................. GAACACCTAAGCCATGAAGTACACCAAGTAA 15314 29 96.6 31 ............................C ACGCATGTCGGAAGCTCGGCTTTTTATCTAC 15374 29 96.6 31 ............................T TTAACTCCAGATGCTACCAATAAGCCAGTAC 15434 29 96.6 31 ..........A.................. CATGGGAGCTTTCATTCATATATGTCATTAG 15494 29 96.6 50 ............................T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGGATTTGGCGCTC 15573 29 86.2 31 ....G.......CC..............T CACATCACTGATGCACAACAACTATTTTCTG 15633 29 86.2 31 ...GC.......CC............... CAGGGGTCAAGTTCAGAAGATTTACGTTACA 15693 29 82.8 31 ...GC.......CC..............G TCATAGTCCTTCTGAACACCAAATGTATAAG 15753 29 82.8 31 ...TC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 15813 29 89.7 31 ....C.......G...............T TAAATGCTCAACTACTTCTGTAGCTAATGGA 15873 29 86.2 31 ...GC........C..............T CTCAACTCATTGATTTTTTCTTCTCTTGCCA 15933 29 89.7 31 ...GC.......................G TGTTTTTCGATATGCTTCGAAAGGTCATCCT 15993 29 79.3 31 ...TC.....A.CC..............T GATGGTTCAGCATATATAGCTAGACGTACAC 16053 29 86.2 31 ...GC......TG................ TCACCAAACACAACCAAAGGTGAACGGGTAT 16113 29 82.8 31 ...GC.......CC..............T TATCTGCCATACCCGACTGCTTTGTTCCTAA 16173 29 93.1 31 ...GC........................ TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 16233 29 86.2 31 ...GC......T................T TCAAATGATTTAATGAGCTTGTAGCCATTTT 16293 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 16353 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 16413 29 79.3 31 ..CGC.......CC..............T TTATAACCACCAGTTAAAGTATTGACTAAAA 16473 29 75.9 31 ...GC.G...A..C.AT............ CAATCGGGGTCGTGGTCAAAAAGATTATCAG 16533 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 16593 29 82.8 31 ...GC....T..TC............... TTAAAGCATTTTCATATGAGCCTTCCTCATT 16653 29 79.3 30 ...TA......TCC..............T TCGGATCAGTCCAGTCATCATCCTCGTCAA 16712 29 82.8 31 T..TA.......G...............T ATCATTGCGCGACAGAACGCATCAATTAATG G [16715] 16773 29 86.2 31 ...GC.......CC............... GATCTATGCAAGATTTATTGGTCTACATTAG 16833 29 89.7 30 ...TG.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 16892 29 82.8 0 .G..G...................AT..T | C [16897] ========== ====== ====== ====== ============================= ================================================== ================== 119 29 95.6 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //